XXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGGATCCGCGGAATTCAGCCT
TACCTTACTACTCAAATAAACAAGGGGAACCCACTAAGAAACTGAATTAG
AATAACTGCAATGTATAGGTAGCTACAGTCTATATACCACCCATATGACC
TTGCATCATTAATACATATTTTGTAGCTTAAAGGTCATTTCTATTACAGA
TCCATTTTCTCTTTAGCAGATTATATTTAGGACATTTTAATTCTCACCAC
CCTGAAACTCAACAGAAATTGTCAGACTAAGTGTAATTTAAAAATAAATA
ACTGATCTACTTCATGTCCGAGAACACCTTAAAATACAACCATTACTTGG
TCTTTTAACCATCCTCCATTCCTGAACCAGTGCATAAAGGGTTTTAGAAA
AATCATACTCTTTAATCCACCCTGTGATAACTATTGTTTTACTCTTCTCT
GGTTTTCTCAAAATGTCAAAATGCTTTTATTAAGACAGGTGATTTGAAGA
GGCTTTGATACCAATCTCTTAGTTTCACATTAATATTGAAAGGAGACAGC
ACAGGGCAGGCACCCAGAACAAAGTCTGGCAGTTCATAGGCACTTCCTTC
TTACCAGCTCTCTTACTCTGTCTCTGAAAAATGAAATGCCATTACTCAGA
GAGTTATTTTGTAAAGAAAGAGACAATAGCGGGAACTCATATTTCATAAG
AATCAAAATTCAATATGTGGTGTCTGGTAAAGATACTGCCAAATTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXTTGCAATTCTCACCTGAGGAATACGGAAATGGCTGAGAAACACCTG
AAAAAAATGGTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAA
CCTGAGATTCCATCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAG
GTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAATACTCCTCCAT
TGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCA
GTTCCTCAGAAAATTGGACATGGTACTACTGGAGGATCCCGCAATACTTC
TCCTGGGCATACATTCAGAAGATGTTCCAACTAGTAAGAAAGACACATGC
TCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGA
ACCCAGATGCCCCTCAACAGAGGAATGGATACAAAAAATGTGGTACATTT
ACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTC
CTAGGCAAATGGTTGGACCTGGAGGGCATCATTCTGAGTGAGGTAACCCA
ATCACAAAATAAATCAAATGATATGTACTCACTGATAAGTGGATATTAGC
CCAGAAACTTAGAATACCCAAGATATAAGTTACAATTTGCAAAACACAGG
AAACTCAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAA

Query= MSMg01no547_j01.b1 MSMg01no547_j01.b1 CHROMAT_FILE:
MSMg01no547_j01.b1 PHD_FILE: MSMg01no547_j01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:14 2005
         (664 letters)



>mm_chr4_93206352_93207415
          Length = 1064

 Score = 1241 bits (642), Expect = 0.0
 Identities = 654/658 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   ggaattcagccttaccttactactcaaataaacaaggggaacccactaagaaactgaatt 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 ggaattcagccttaccttactactcaaataaacaaggggaacccactaagaaactgaatt 804

                                                                       
Query: 66  agaataactgcaatgtataggtagctacagtctatataccacccatatgaccttgcatca 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 agaataactgcaatgtataggtagctacagtctatataccacccatatgaccttgcatca 744

                                                                       
Query: 126 ttaatacatattttgtagcttaaaggtcatttctattacagatccattttctctttagca 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttaatacatattttgtagcttaaaggtcatttctattacagatccattttctctttagca 684

                                                                       
Query: 186 gattatatttaggacattttaattctcaccaccctgaaactcaacagaaattgtcagact 245
           |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 683 gattatatttaggacattttaattcttaccaccctgaaactcaacagaaattctcagact 624

                                                                       
Query: 246 aagtgtaatttaaaaataaataactgatctacttcatgtccgagaacaccttaaaataca 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aagtgtaatttaaaaataaataactgatctacttcatgtccgagaacaccttaaaataca 564

                                                                       
Query: 306 accattacttggtcttttaaccatcctccattcctgaaccagtgcataaagggttttaga 365
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 563 accattacttggtcttttaaccgtcctccattcctgaaccagtgcataaagggttttaga 504

                                                                       
Query: 366 aaaatcatactctttaatccaccctgtgataactattgttttactcttctctggttttct 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaaatcatactctttaatccaccctgtgataactattgttttactcttctctggttttct 444

                                                                       
Query: 426 caaaatgtcaaaatgcttttattaagacaggtgatttgaagaggctttgataccaatctc 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 caaaatgtcaaaatgcttttattaagacaggtgatttgaagaggctttgataccaatctc 384

                                                                       
Query: 486 ttagtttcacattaatattgaaaggagacagcacagggcaggcacccagaacaaagtctg 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttagtttcacattaatattgaaaggagacagcacagggcaggcacccagaacaaagtctg 324

                                                                       
Query: 546 gcagttcataggcacttccttcttaccagctctcttactctgtctctgaaaaatgaaatg 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcagttcataggcacttccttcttaccagctctcttactctgtctctgaaaaatgaaatg 264

                                                                     
Query: 606 ccattactcagagagttattttgtaaagaaagagacaatagcgggaactcatatttca 663
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 263 ccattactcagagagttattttgtaaagaaagagaaaatagcgggaactcatatttca 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)