NACCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAAGGCCCTATACCTAGATATAATAAAACAATATACAGAAAACCA
GCGACCAACATCAAACTAAATGGAGAGAAACTCAAAGCAATCCCACTAAA
ATGAAGGACTAGATAAGGCTGCCCACTTTCTCCCTACCTATTCAATATAG
TACTTGAAGTCCTCCCAGAGCAATTAGACCACAAAAAGGAGATTAAGAAG
ATACAAATTGGAAAGGAAGAAGTCAAAATATCACTATTTGAAGATGATAT
GATAGTATATGTAAGTGAACCCAAAAATTCCACCAGAGATCTCCTAAACC
TGATAAACAGCTTCAGTGAAGTAGCTGGATATAAAATTAACTCAAATCAA
TGGTCTTTCTCTACACAAAGGATATATGGACTGAGAAAGAAATTGAGAAA
ACAACACCCTTCACAATAGTCACAAATAATATAAAATACCTTGGTGTGAC
TCTAACTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGAGTTTGA
AGAAAGAAGTTAAAGAAGATCTCATAAGTTGGAAAGATCTCCCATGCTTA
TGGATTGGTATGATTAATATAGTAAAACTGGCTATCCTGCTGAAAGCAAT
CTACAGATTCAGTGCAATCCTCTCCAAAATTACAACTCAATTCTTCACTG
AAAAAGAAAGGGCAGTTTGCAAATTTAT

ACGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXGAGATTAGAAGAAAAGAGTCTAAAGGACTCAGTGATAGTGA
TAGTGGCAGAGAAAGTGTTTAATGAAAGAGAGAGTGCAGAGGACAAGCAG
ATGACAGGACAGAGGCAACAGACTCACAACTTGGCAAAGATCCTGTTGGT
GCCATGACCAAAGTAGAAGACTGTAGGAGACATTTGAAACAAATGGCTTC
TAGAAACCAATGGGCTTATTCAGGCTGTGGCACTGAGCCAGTGGCCTCCC
TGTGTAGGAGATGTCTGAAACAAATAGCTTCTAGAGAAAGAGGTTTGGGG
GACCCTAAAGATCAAAAATGCCCCGACTTGAAAAAGAACCACCAATATAC
TTATTGTAGGAGAAGAAAGAAAGAGGAGGAGGAGGAGGAGGAAGAGGAAA
AGGAAGAGGAAGAGGAAGAGGAAGAGGAGGAGGAGGTAGATNTTCTTCTT
TGGGGGAAAAAAAGTCTATTCTAATCATGGCCTTTAAATATGCCCATGGT
AACTCTTAAAACAGAGGGGATACCCTCCTACTTTCCTAGTTTGTTATGGT
CTATAGGTGGCTTTTCCTAGTGTTGAAAAAAAAATTCTTTAAACAGTCTC
CTTGTTATGCCACAAAATGATCTATGACCCTTTTTATCCTCTTCACGGGA
AAGATATTATTTTGCAAACCCCCTTTTTCCTCGTATACCGGTTCCCCCAT
CTTTTAG

Query= MSMg01no548_d11.g1 MSMg01no548_d11.g1 CHROMAT_FILE:
MSMg01no548_d11.g1 PHD_FILE: MSMg01no548_d11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:04 2005
         (435 letters)



>mm_chr4_72057808_72058642
          Length = 835

 Score =  748 bits (387), Expect = 0.0
 Identities = 416/427 (97%), Gaps = 3/427 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gagattagaagaaaagagtctaaaggactcagtgatagtgatagtggcagagaaagtgtt 60
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 558 gagattagaagaaaagagtctaaaggactcggtgatagtgatagtggcagagaaagtgtt 499

                                                                       
Query: 61  taatgaaagagagagtgcagaggacaagcagatgacaggacagaggcaacagactcacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 taatgaaagagagagtgcagaggacaagcagatgacaggacagaggcaacagactcacaa 439

                                                                       
Query: 121 cttggcaaagatcctgttggtgccatgaccaaagtagaagactgtaggagacatttgaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cttggcaaagatcctgttggtgccatgaccaaagtagaagactgtaggagacatttgaaa 379

                                                                       
Query: 181 caaatggcttctagaaaccaatgggcttattcaggctgtggcactgagccagtggcctcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caaatggcttctagaaaccaatgggcttattcaggctgtggcactgagccagtggcctcc 319

                                                                       
Query: 241 ctgtgtaggagatgtctgaaacaaatagcttctagagaaagaggtttgggggaccctaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctgtgtaggagatgtctgaaacaaatagcttctagagaaagaggtttgggggaccctaaa 259

                                                                       
Query: 301 gatcaaaaatgccccgacttgaaaaagaaccaccaatatacttattgtaggagaagaaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 258 gatcaaaaatgccccgacttgaaaaagaaccaccaatatacttattggaggagaagaaag 199

                                                                       
Query: 361 aaagaggaggaggaggaggaggaagaggaaaaggaagaggaagaggaagaggaagaggag 420
           ||||||||||||||||||||||| |||||   ||| ||||| ||||| ||||| ||||||
Sbjct: 198 aaagaggaggaggaggaggaggaggagga---ggaggaggaggaggaggaggaggaggag 142

                  
Query: 421 gaggagg 427
           || ||||
Sbjct: 141 gaagagg 135


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space:   351876
Effective search space used:   351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)