TTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCAACTGAGGAATACAGAAGGGCTGAGAAGCACCTGAAAAAATGTTC
AACATCCTTAATCATCAGGAAAATGCAAATCAAAACAACCTTGAAATTCC
ACCTCACACCAGCCAGAATGGTTAACATCAAAGATTCATGTGACAGCAGA
TGCTGGCGAGGATGTGGAGAAAAAGGAACACTCCTCCATTGCTGGTGGGA
TTGCTAGCTTGTACAACCACTCTGGAAATGAGTCTGGTGGTTCATCAGAA
AACTGAAGATAGTACTACTGCAAGATCCAGCAATATCTCTCCTGGGCATA
TACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCTCCACTATGTT
CATAGCAGCCCTGTTTATAATAGCCAGAAGCTGGAAAGAACACAGATGTC
CCTCAACAGAGGAAAGGATACAGAAAATGTGATACATTTACACAATGGAG
TACTACTCAGCTATTAAAAACAATGAATTTAAGAATTCTTGGGCAAATGG
ATGTATCTAGAGGATATCATCCTGAGTGAGGTAACCCAATCACAAAAGAA
GTCACTTGATATGCACTCACTGATAAGTGGATATTAGCCCAGAAACTTAG
AATACCCAAGGTACAATTTTGCAAACACCTAGAAATTCAAGAAGAATGAA
GACCAACATGGTGGATACTTCATTCCCTCTTTAGAAATAAGG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTTATCCTTGACCTGAAGAATTCT
CTTAGTACTAATTGTGATGTCATTTTGTTAGTAACTAGCTATCTGACATT
TATTTTTATTGTTAATGTGGAAAGTTTCATTTCCTCTTCATTTGGGAATA
ATTGTGTTAGAGGAGATTTTGGCTATTTTTCTTTGAACAATTAAGTCTGG
TACTCACTGATTCTCCTGACCTCCATAGATTCTGCTGAGATTACAGATGA
TATTCTTATTGAGATTCTGTTGTAGTGCCAGCATTTCCTCGAGTCTGATT
CTGTTCGGTGGTTTTTCTACTTGGAGTGTTCTGATCTTTCTGGATACATA
GGCTGTAGTTTTCAGTAACTGAGGGAAGTAAATAGCTGTTATTTCTCTGA
ATACCTTTTCTTGTTTTACTTGCCACTCTTACTTGTGTGCTTGTGTGTCC
ATGTGCTGTGTGTATATGTGGTGTGTGCATGTGTATGTCTATGTGTTGTG
TATGTGTGTGGATGCCCACTGCATGTATGAATACTCATTTTCTTGTCTTA
CAGCTGCATCTCATTATTCCCCTCCCCCACCCCTCCATTAGCTTATATAA
CTTCTAGAAATATCTCTTCAAGTTTGCTCATATTTTGCTTCTTCAAGTCT
CTTATAGGGTCACAGTCAGTTTTTTTTTTAAN

Query= MSMg01no548_p04.g1 MSMg01no548_p04.g1 CHROMAT_FILE:
MSMg01no548_p04.g1 PHD_FILE: MSMg01no548_p04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:31:01 2005
         (613 letters)



>mm_chr4_89438742_89439754
          Length = 1013

 Score = 1149 bits (594), Expect = 0.0
 Identities = 606/610 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acttatccttgacctgaagaattctcttagtactaattgtgatgtcattttgttagtaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttatccttgacctgaagaattctcttagtactaattgtgatgtcattttgttagtaac 260

                                                                       
Query: 61  tagctatctgacatttatttttattgttaatgtggaaagtttcatttcctcttcatttgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagctatctgacatttatttttattgttaatgtggaaagtttcatttcctcttcatttgg 320

                                                                       
Query: 121 gaataattgtgttagaggagattttggctatttttctttgaacaattaagtctggtactc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaataattgtgttagaggagattttggctatttttctttgaacaattaagtctggtactc 380

                                                                       
Query: 181 actgattctcctgacctccatagattctgctgagattacagatgatattcttattgagat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgattctcctgacctccatagattctgctgagattacagatgatattcttattgagat 440

                                                                       
Query: 241 tctgttgtagtgccagcatttcctcgagtctgattctgttcggtggtttttctacttgga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgttgtagtgccagcatttcctcgagtctgattctgttcggtggtttttctacttgga 500

                                                                       
Query: 301 gtgttctgatctttctggatacataggctgtagttttcagtaactgagggaagtaaatag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgttctgatctttctggatacataggctgtagttttcagtaactgagggaagtaaatag 560

                                                                       
Query: 361 ctgttatttctctgaataccttttcttgttttacttgccactcttacttgtgtgcttgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgttatttctctgaataccttttcttgttttacttgccactcttacttgtgtgcttgtg 620

                                                                       
Query: 421 tgtccatgtgctgtgtgtatatgtggtgtgtgcatgtgtatgtctatgtgttgtgtatgt 480
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 tgtccatgtgctgtgtgtatatgtggtgtgtgcatatgtatgtctatgtgttgtgtatgt 680

                                                                       
Query: 481 gtgtggatgcccactgcatgtatgaatactcattttcttgtcttacagctgcatctcatt 540
           |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 681 gtgtggatgcccactgcacgtatgaatactcatcttcttgtcttacagctgcatctcatt 740

                                                                       
Query: 541 attcccctcccccacccctccattagcttatataacttctagaaatatctcttcaagttt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 741 attcccctcccccacccctccattagcttatataacttctagaaatatctcttcaagttc 800

                     
Query: 601 gctcatattt 610
           ||||||||||
Sbjct: 801 gctcatattt 810


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)