BAC Information

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BAC

Clone NameB6Ng01-003B05
Chromosome5 (Build37)
Map Location 56,666,452 - 56,667,415
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666405
Downstream geneLOC100041335, LOC100041349, LOC666455
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003B05.bB6Ng01-003B05.g
ACCDH840903DH840904
length9631,198
definitionDH840903|Mus musculus domesticus DNA, BAC clone: B6Ng01-003B05, 5' end.DH840904|Mus musculus domesticus DNA, BAC clone: B6Ng01-003B05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctattatacatcttttttttttactctttacttttaatttact
cataagtttgcttcttagttgtacattctgtgttatatattatttttctg
tatacttattatctgctcctgagtacttctttaagtaaatctagatacat
agaagatgaagtactttatagtcaacgtaatcaccctggtcaaatatatc
cctatcattggctctcccagtgttcagagagctgggttaatctaagccaa
atgacatggataaactaaatttattagttttaattttctttctattatag
cagttacacgactagctgatatttctgaagaaatgtcaagatctattatt
tttacagaatatttaaatttttatttttgaaatattctctaattattcac
aaaagattttactggtcattttctattgttaagttgttgtctaaagctaa
tactggaacgacaaatgatgaatgctaatggggcatgagccagctattca
aataagagacttggatttttacaaatgacctacactttgttctaaaatgg
ctgttactatggtaactttctgagaacccttcaagattcaaaagaaaaac
ataaaacatagcttaacaatttgccatttctaccactattaagtgttata
attatttttggttttgttatgatttaaaaaggcacaaactccacatggta
gtacattcacatcatttaaagaaaagagcaggggataagacttcatggac
atattaaaatgtattgtttatagaaaatataatttatataccagagatat
agctcagatccagttaactccatagcagaccatataccaaatgtggtctt
atagactctattctcagcataccagcttttcttgtacagttagcaatgaa
aacaattggaaatggttatttaattacttaaaatgcattgtgtgtgtgtg
tgtgtgtggtgtg
gaattctttgtttagatctgagccccattttttaatggggttatttgatt
ttccagagtccaccttcttgagttctttatatatattgggtattagtctc
ctatttcatttaggataggtaaagattctttcccaatctgttggtggcct
ttttgtattattgacagtgtcttttgcctcacagaagctttgcaatttta
taaggtctcatttgtagattcttgatcttagggcacaagccattgctgat
ctattcaggaattttttccctgtgcccaaatcttcgaggcttttccccaa
tttttcctctataaatttcactgtctctggttttatgtgaccataggtgt
gtaagttcatttctgggtcttcagttctattccattggtctacttgtctg
ttactataccagtaccatgcagtttttatcacaattgctctgtaatgcag
ctttaggtcaggtatggtgattccaagagaggttcttttatccatgagaa
gaggttttgctctcctagattttttgttattccagataaatttgcagatt
gccctttctaattcgttaagaattgagttgtaattttgatggggattgca
ttgaatctgtagattgcttttggcaagatagccattttcactatattgat
cctgccaatccatgagcatgggagatctttcaatcttttgagatcttctt
tgctttctttcttcagagacttgaagttcttatcatacagatctttcact
tccttagttagagtctcgccaagatattttttattatttgtgactatgga
aaagggtgttgtttccctaatttctttctcagcctgtttatcctttgtgt
acagaaaggccgttgacttgttgagttaatttatatccagctacttcatt
gaagatgttatcagcttagggtctctggtggaatttctgcttcatgatct
gtccactgaagaaagtgtatgtgtcttcactatatttgtgagtgcatggt
gctttgagttactaaagttctcatgaattggctgccttgaatggagcaaa
aattgagaatgaggttctcctgagattacccttgatagatgaggttcctc
ttgctatcgaaacctgagtgtgtcattatccgatcaaggcatcgctgttt
cctacactgctcgaatgttcaccttcatccagggaggctgctcttcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_56666452_56667415
seq2: B6Ng01-003B05.b_45_1007

seq1  GAATTCTCTATTATACATCTTTTTTTTTTACTCTTTACTTTTAATTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATTATACATCTTTTTTTTTTACTCTTTACTTTTAATTTACT  50

seq1  CATAAGTTTGCTTCTTAGTTGTACATTCTGTGTTATATATTATTTTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTTTGCTTCTTAGTTGTACATTCTGTGTTATATATTATTTTTCTG  100

seq1  TATACTTATTATCTGCTCCTGAGTACTTCTTTAAGTAAATCTAGATACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTATTATCTGCTCCTGAGTACTTCTTTAAGTAAATCTAGATACAT  150

seq1  AGAAGATGAAGTACTTTATAGTCAACGTAATCACCCTGGTCAAATATATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGAAGTACTTTATAGTCAACGTAATCACCCTGGTCAAATATATC  200

seq1  CCTATCATTGGCTCTCCCAGTGTTCAGAGAGCTGGGTTAATCTAAGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCATTGGCTCTCCCAGTGTTCAGAGAGCTGGGTTAATCTAAGCCAA  250

seq1  ATGACATGGATAAACTAAATTTATTAGTTTTAATTTTCTTTCTATTATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATGGATAAACTAAATTTATTAGTTTTAATTTTCTTTCTATTATAG  300

seq1  CAGTTACACGACTAGCTGATATTTCTGAAGAAATGTCAAGATCTATTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACACGACTAGCTGATATTTCTGAAGAAATGTCAAGATCTATTATT  350

seq1  TTTACAGAATATTTAAATTTTTATTTTTGAAATATTCTCTAATTATTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGAATATTTAAATTTTTATTTTTGAAATATTCTCTAATTATTCAC  400

seq1  AAAAGATTTTACTGGTCATTTTCTATTGTTAAGTTGTTGTCTAAAGCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTTTACTGGTCATTTTCTATTGTTAAGTTGTTGTCTAAAGCTAA  450

seq1  TACTGGAACGACAAATGATGAATGCTAATGGGGCATGAGCCAGCTATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGAACGACAAATGATGAATGCTAATGGGGCATGAGCCAGCTATTCA  500

seq1  AATAAGAGACTTGGATTTTTACAAATGACCTACACTTTGTTCTAAAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAGACTTGGATTTTTACAAATGACCTACACTTTGTTCTAAAATGG  550

seq1  CTGTTACTATGGTAACTTTCTGAGAACCCTTCAAGATTCAAAAGAAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACTATGGTAACTTTCTGAGAACCCTTCAAGATTCAAAAGAAAAAC  600

seq1  ATAAAACATAGCTTAACAATTTGCCATTTCTACCACTATTAAGTGTTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACATAGCTTAACAATTTGCCATTTCTACCACTATTAAGTGTTATA  650

seq1  ATTATTTTTGGTTTTGTTATGATTTAAAAAGGCACAAACTCCACATGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTGGTTTTGTTATGATTTAAAAAGGCACAAACTCCACATGGTA  700

seq1  GTACATTCACATCATTTAAAGAAAAGAGCAGGGGATAAGACTTCATGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTCACATCATTTAAAGAAAAGAGCAGGGGATAAGACTTCATGGAC  750

seq1  ATATTAAAATGTATTGTTTATAGAAAATATAA-TTATATACCAGAGATAT  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATATTAAAATGTATTGTTTATAGAAAATATAATTTATATACCAGAGATAT  800

seq1  AGCTCAGATCCAGTTAACTCCATAGCAGACCATATACCAAATGTGGTCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGATCCAGTTAACTCCATAGCAGACCATATACCAAATGTGGTCTT  850

seq1  ATAGACTCTATTCTCAGCATACCAGCTTTTCTTGTACAGTTAAGCAATGA  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATAGACTCTATTCTCAGCATACCAGCTTTTCTTGTACAGTT-AGCAATGA  899

seq1  AAACAATTGGAAATGGTTATTTAATTACTTAAAATGCATTGTGTGTGTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATTGGAAATGGTTATTTAATTACTTAAAATGCATTGTGTGTGTGT  949

seq1  GTGTGTGTGTGTGTG  964
      ||||||||| |||||
seq2  GTGTGTGTG-GTGTG  963