BAC Information

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BAC

Clone NameB6Ng01-005P08
Chromosome5 (Build37)
Map Location 39,421,709 - 39,421,917
singlet/doubletsinglet
Overlap genenone
Upstream geneStx18, Nsg1, LOC100040397, Zfp509, Lyar, Tmem128, Otop1, Drd5, 4930487D11Rik, Slc2a9, Wdr1, 4930421P07Rik, 6820424L24Rik, Clnk
Downstream geneLOC384174, Hs3st1, EG665839
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005P08.bB6Ng01-005P08.g
ACCDH842949DH842950
length1,189209
definitionDH842949|Mus musculus domesticus DNA, BAC clone: B6Ng01-005P08, 5' end.DH842950|Mus musculus domesticus DNA, BAC clone: B6Ng01-005P08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatatacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaattcgtctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacttttggtggaatca
ccatgccagacctaaagctttactacagagcaattgtgataaaaactgca
tggtacttgtatagagacagacaagtagaccaatggaatagaattgaaga
ctcagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaatggtgctggc
acaactgggtgttatcgtgtagaagaatgcgaatcgatccatacttatct
cttgtactagtcaaatctaagtgatcaggactccataaatcagagaactg
aactatagaggaaagtgggaaggcttgaagaattgggcacagcaatctga
cgacagcatgcttgcgagatcgagattgacatggaactatgatcaagttc
gcagcaggaatcgtcatagaccaagactctacagaattg
tctgagctctgggggctcctggaagcatgctctattcagaaacatagagt
tgcagtttggaaatctgctgagggctttgaagctccacatgtaagacgtt
tgggggctgtgggagagccttttctaaaatcacagagggcagtgagcaga
ttttgtgtaaactggaagtccccaaaagctggtgggttggacagtggggg
tggggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_39421709_39421917
seq2: B6Ng01-005P08.g_74_282 (reverse)

seq1  CCCTCCCCACCCCCACTGTCCAACCCACCAGCTTTTGGGGACTTCCAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCACCCCCACTGTCCAACCCACCAGCTTTTGGGGACTTCCAGTT  50

seq1  TACACAAAATCTGCTCACTGCCCTCTGTGATTTTAGAAAAGGCTCTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAAATCTGCTCACTGCCCTCTGTGATTTTAGAAAAGGCTCTCCCA  100

seq1  CAGCCCCCAAACGTCTTACATGTGGAGCTTCAAAGCCCTCAGCAGATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCCAAACGTCTTACATGTGGAGCTTCAAAGCCCTCAGCAGATTTC  150

seq1  CAAACTGCAACTCTATGTTTCTGAATAGAGCATGCTTCCAGGAGCCCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGCAACTCTATGTTTCTGAATAGAGCATGCTTCCAGGAGCCCCCA  200

seq1  GAGCTCAGA  209
      |||||||||
seq2  GAGCTCAGA  209