MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-007A08
Chromosome	5 (Build37)
Map Location	81,539,403 - 81,539,879
singlet/doublet	singlet
Overlap gene	Lphn3
Upstream gene	LOC100039506, LOC100039384
Downstream gene	none
Link	Open Mouse BAC browser

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BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-007A08.b	B6Ng01-007A08.g
ACC	DH843717	DH843718
length	1,141	471
definition	DH843717\|Mus musculus domesticus DNA, BAC clone: B6Ng01-007A08, 5' end.	DH843718\|Mus musculus domesticus DNA, BAC clone: B6Ng01-007A08, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg tgcaacatccttaatcatcagggaaatgcaaatcaaaacaatcctgagat tccacctcacatcagtcagaatggctaatgtcatcaaaaactcaggtgac agcagatgctagcgaggatgtggagaaagaggaacacttctccattgttg gtgggattgcaagcttgtacagccactctggaaatcagtctggcggttcc tcagaaaattggacatagtactaccagaggatcccgcaatacctcttcta ggcatatatccagaagatgtcccaaacggtaagaaggacacatgctccac tatgttcatagcagccttatttataatagccagaagctggaaagaaccca gatgcccctcaacagaggaatggatacagaaaatgtggtatatttacaca atggattactagtctgctattaaaaagaatgaatttaagaaattcttagg caaatggatggacctggagggcatcatcctgagtgaggtaacccaatcac aaaggaactcacacaatatttactcactgataagtggatattagcccaga aactaggaaacccaagatataagatacaatttgctaaatgcatgaaactc aagaggaaggaagaacaaagtgtggacactttgccccgtcttagaattgg gcacaaaacacccatggaaggagttacagagacaaagtttggagctgaga tgaaaggatggaccatctagagactgccatatccagggatccatcccata atcagcttccaaacgctgacaccattgcatacactagcagactttgctga aaggacccagattatagctgtctcttgtgagactatgcctgggcctggca aacacagaggtggggtgctcacagttagctattggatggaacacagggcc cctaatggaggagctagagaaagtaccctaaggagctgagggatctgcaa ccctatgggtggacacattatgactacagtacccgagctcttgactctag ctgatattataaagaatgctagtcgcatcactgtaagaaaggctcaatgg acttgcaactttatatgcctcagtaaggaacacacggcaat	tttgaaaatatctcagctgaggcaaactagttttcatggcaagattaaaa aaaaaaaaaaaaccaacaacaacaaacttaattactgaaaaactattaaa caagtagctttaaattcaattttaatactataaaagtatatagtttccta agattggcataaaattgccattgtaaaccacatacaatattctatggttt ctaacacagagccaaaaagacaaatcgagactccaattatcagattttag actacattccaatgccaaggtaacataaacaatttaccaaaaagattaaa tctgtggcaaaaataaatctaattattttaccatatttaagtgtgattta agagactgtgagcaaactaaacgtcattattctattattctcttatgaat gagctacagaagaaaaaggaagcaagaaagtgaaagagagagagagaagg gtgagggaggagagatgggga
quality values	Open. Hide. 47 30 35 36 57 53 57 38 27 61 61 61 61 43 43 61 34 31 37 61 47 61 61 61 61 61 61 55 45 38 33 55 28 55 55 43 61 55 61 61 61 61 49 61 61 61 61 55 40 47 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 52 61 61 61 47 61 61 61 61 47 52 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 47 61 47 61 61 61 61 61 61 61 61 61 53 61 47 57 57 57 53 57 46 53 57 57 53 57 57 57 53 57 57 53 57 57 53 53 57 57 57 53 57 57 57 46 53 57 57 53 53 57 57 53 52 53 47 53 57 52 53 57 53 53 50 57 47 47 47 53 53 47 57 57 57 53 39 57 53 53 53 53 47 33 48 52 52 57 53 57 28 53 53 50 53 53 57 57 47 52 53 40 57 53 47 57 37 45 52 57 57 47 47 52 57 53 42 57 53 57 29 53 53 52 42 53 46 53 45 57 43 35 33 57 57 50 53 57 50 57 42 38 28 40 52 57 52 50 47 43 47 47 46 47 36 42 38 33 33 31 57 42 42 52 57 41 41 37 27 31 35 53 53 47 34 50 31 38 34 30 37 39 43 37 34 18 53 40 33 41 31 25 37 34 36 53 22 33 31 34 45 52 33 37 57 17 52 33 40 17 33 40 40 53 19 47 36 48 52 53 40 33 33 27 26 40 41 33 31 41 25 44 47 48 37 29 40 27 23 27 32 48 37 40 24 47 33 41 33 31 22 34 39 33 20 28 20 31 15 30 35 46 47 27 38 30 35 35 32 24 24 28 13 30 27 34 29 30 29 31 30 34 29 29 31 23 20 30 39 20 47 30 29 26 18 33 33 39 14 10 20 30 13 30 46 24 27 11 23 30 23 34 32 29 34 48 48 31 7 36 28 18 37 29 28 19 16 6 9 14 29 20 28 29 30 24 18 29 29 29 29 28 40 28 15 26 14 34 13 28 28 28 26 18 23 21 31 31 23 9 27 25 21 31 21 29 51 31 28 19 29 17 22 43 18 30 14 15 36 36 12 12 16 8 12 10 7 11 13 13 8 5 6 5 15 30 14 27 29 17 19 12 19 25 38 26 17 8 7 17 14 18 36 10 7 21 29 23 19 24 23 22 29 13 17 22 7 9 9 18 28 20 17 32 19 25 51 21 9 10 19 22 26 33 6 19 8 30 9 12 9 27 28 19 38 14 21 13 10 5 9 8 19 21 14 13 23 39 22 29 21 34 25 44 33 13 25 24 19 9 9 4 4 13 13 30 25 16 35 12 19 18 6 8 10 8 10 30 33 25 4 11 9 12 13 16 6 26 18 29 13 15 21 8 22 22 14 5 5 5 6 6 6 4 8 7 6 3 5 5 16 26 10 14 5 4 7 6 20 10 7 10 6 6 3 5 6 5 5 3 15 12 13 15 12 6 9 7 4 4 14 8 10 24 8 10 19 14 12 14 12 12 12 9 11 14 30 14 6 12 5 5 6 26 8 8 7 8 3 4 3 1 3 4 3 5 8 9 13 4 4 4 11 8 3 4 1	Open. Hide. 52 52 50 36 28 28 28 35 52 43 59 61 61 59 59 59 61 61 61 61 59 59 59 59 61 61 61 59 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 59 59 59 59 59 59 61 59 59 59 59 59 61 59 59 61 61 61 61 59 59 61 61 59 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 59 59 61 59 61 61 61 52 52 41 59 52 52 59 59 59 59 59 59 59 59 59 61 61 61 59 61 59 61 61 61 52 59 59 59 59 59 59 59 59 59 59 61 59 59 59 59 59 59 59 59 59 59 59 61 61 61 61 61 59 61 61 61 59 59 59 52 61 59 61 59 59 59 61 59 59 59 61 59 59 61 61 61 61 59 59 59 59 59 59 59 59 52 61 61 61 61 61 52 52 36 55 59 59 59 59 59 52 61 59 59 61 61 59 61 61 61 59 59 59 59 61 59 59 52 59 59 61 59 61 61 61 59 61 55 61 61 55 55 55 61 61 61 55 61 61 55 61 61 52 55 50 55 55 52 55 61 52 55 52 50 55 52 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 55 61 61 61 61 61 61 55 50 55 61 50 55 61 55 61 50 55 55 50 55 50 55 55 55 61 50 61 61 55 61 55 61 61 61 55 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 53 53 50 50 52 61 61 61 61 61 61 61 61 61 50 61 47 53 61 53 52 61 61 47 61 61 61 61 61 61 61 61 61 53 61 53 61 61 61 61 61 61 47 61 61 61 61 61 61 53 61 61 61 53 61 61 61 50 61 61 61 61 61 52 61 61 61 61 47 61 47 42 61 43 47 42 47 47 47 37 25 25 15

Alignment Information

BAC End 1	BAC End 2
	seq1: chr5_81539403_81539879 seq2: B6Ng01-007A08.g_65_541 (reverse) seq1 TCCCCATCTCTCCTCCCTCACCCTTCTCTCTCTCTCTTTCACTTTCTTGC 50 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TCCCCATCTCTCCTCCCTCACCCTTCTCTCTCTCTCTTTCACTTTCTTGC 50 seq1 TTCCTTTTTCTTCTGTAGCTCATTCATAAGAGAATAATAGAATAATGACG 100 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TTCCTTTTTCTTCTGTAGCTCATTCATAAGAGAATAATAGAATAATGACG 100 seq1 TTTAGTTTGCTCACAGTCTCTTAAATCACACTTAAATATGGTAAAATAAT 150 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TTTAGTTTGCTCACAGTCTCTTAAATCACACTTAAATATGGTAAAATAAT 150 seq1 TAGATTTATTTTTGCCACAGATTTAATCTTTTTGGTAAATTGTTTATGTT 200 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TAGATTTATTTTTGCCACAGATTTAATCTTTTTGGTAAATTGTTTATGTT 200 seq1 ACCTTGGCATTGGAATGTAGTCTAAAATCTGATAATTGGAGTCTCGATTT 250 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 ACCTTGGCATTGGAATGTAGTCTAAAATCTGATAATTGGAGTCTCGATTT 250 seq1 GTCTTTTTGGCTCTGTGTTAGAAACCATAGAATATTGTATGTGGTTTACA 300 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GTCTTTTTGGCTCTGTGTTAGAAACCATAGAATATTGTATGTGGTTTACA 300 seq1 ATGGCAATTTTATGCCAATCTTAGGAAACTATATACTTTTATAGTATTAA 350 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 ATGGCAATTTTATGCCAATCTTAGGAAACTATATACTTTTATAGTATTAA 350 seq1 AATTGAATTTAAAGCTACTTGTTTAATAGTTTTTCAGTAATTAAGTTTGT 400 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AATTGAATTTAAAGCTACTTGTTTAATAGTTTTTCAGTAATTAAGTTTGT 400 seq1 TGTTGTTGGTTTTTTTTTTTTTTTTAATCTTGCCATGAAAACTAGTTTGC 450 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TGTTGTTGGTTTTTTTTTTTTTTTTAATCTTGCCATGAAAACTAGTTTGC 450 seq1 CTCAGCTGAGATATTTTCAAAGAATTC 477 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CTCAGCTGAGATATTTTCAAAGAATTC 477

BAC End 1

BAC End 2

seq1: chr5_81539403_81539879
seq2: B6Ng01-007A08.g_65_541 (reverse)

seq1  TCCCCATCTCTCCTCCCTCACCCTTCTCTCTCTCTCTTTCACTTTCTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATCTCTCCTCCCTCACCCTTCTCTCTCTCTCTTTCACTTTCTTGC  50

seq1  TTCCTTTTTCTTCTGTAGCTCATTCATAAGAGAATAATAGAATAATGACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTCTTCTGTAGCTCATTCATAAGAGAATAATAGAATAATGACG  100

seq1  TTTAGTTTGCTCACAGTCTCTTAAATCACACTTAAATATGGTAAAATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTGCTCACAGTCTCTTAAATCACACTTAAATATGGTAAAATAAT  150

seq1  TAGATTTATTTTTGCCACAGATTTAATCTTTTTGGTAAATTGTTTATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTATTTTTGCCACAGATTTAATCTTTTTGGTAAATTGTTTATGTT  200

seq1  ACCTTGGCATTGGAATGTAGTCTAAAATCTGATAATTGGAGTCTCGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGCATTGGAATGTAGTCTAAAATCTGATAATTGGAGTCTCGATTT  250

seq1  GTCTTTTTGGCTCTGTGTTAGAAACCATAGAATATTGTATGTGGTTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTTGGCTCTGTGTTAGAAACCATAGAATATTGTATGTGGTTTACA  300

seq1  ATGGCAATTTTATGCCAATCTTAGGAAACTATATACTTTTATAGTATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAATTTTATGCCAATCTTAGGAAACTATATACTTTTATAGTATTAA  350

seq1  AATTGAATTTAAAGCTACTTGTTTAATAGTTTTTCAGTAATTAAGTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAATTTAAAGCTACTTGTTTAATAGTTTTTCAGTAATTAAGTTTGT  400

seq1  TGTTGTTGGTTTTTTTTTTTTTTTTAATCTTGCCATGAAAACTAGTTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGGTTTTTTTTTTTTTTTTAATCTTGCCATGAAAACTAGTTTGC  450

seq1  CTCAGCTGAGATATTTTCAAAGAATTC  477
      |||||||||||||||||||||||||||
seq2  CTCAGCTGAGATATTTTCAAAGAATTC  477

BAC Information

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BAC

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BAC End Information

Alignment Information