BAC Information

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BAC

Clone NameB6Ng01-011P05
Chromosome5 (Build37)
Map Location 60,734,863 - 60,735,862
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546866, Cbfa2t2-ps1
Downstream geneLOC100041498, LOC666597, EG666610
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011P05.g
ACCDH847189
length1,000
definitionDH847189|Mus musculus domesticus DNA, BAC clone: B6Ng01-011P05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttatctctattcttaggtattatacacacacacactgagtatc
ttttgttaagtattccttaatatgtttttatgttttgactttgtaatctt
atagaagttcatttcaaattagttttccctgcatcgcttaagttctaccc
ttgaattgaacttgttcgaattactattcacattctaggaaagaaactct
tggtgagcttgtccagttctcatatatacacaaagcctttcccagggact
ttttcctacacatttagagagtgcttcataaaattatattaaaaaatctt
ttatccattgagaaattgagcttctttactaaagaaaatttgttagcatt
tactttttagggtcaatttaaaagaaaaaaatctttcatgttcaaatttt
tttatctgtaaaatggttggaccactgaaatgtccatgaaacactctcat
gtttgcaacatcaatgacattaatttctttccttctgttctctgagaagc
cttagcagcagtgaatgtcaggttcccatcatgtcataattcatttctct
ttgttctactttccttctttgtgaaattttgatatcttcctacttcaatt
gattttgtttcagtaaatggcgatgtacatattgaatggataaacgtatc
aacatatgctttttatggacttattaaatgtgaattcgcttgtctcataa
aataaagttccatattgtacaatacaccttacttaaagtgctatggacct
ttaatcttattataggtcagaaaatgaaatgaagtccttaataactaaaa
gccatattcaatctctactttataggaaatcatggactgactcatgagga
gtctttaatgacatcgttctgcatcgcatcaatctttcccattaaccctt
gacgggaaaacattggtctgctttagaaaaacagttcataagatggactt
aattgctatcatcaatgttgcttttcagctattcgtggaatgagattgcc

quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_60734863_60735862
seq2: B6Ng01-011P05.g_67_1066 (reverse)

seq1  GGCAATCTCATTCCAC-AATA-CTTGAAAGCCACACTGATGCTAGC-ATT  47
      |||||||||||||||| |||| ||  ||||| ||| ||||| |||| |||
seq2  GGCAATCTCATTCCACGAATAGCTGAAAAGCAACATTGATGATAGCAATT  50

seq1  AAGGCCATTTTATGAGCTGTTTTTCTAAATCAAGACCAATTATTTTCACC  97
      ||| |||| |||||| ||||||||||||| | ||||||| | ||||| ||
seq2  AAGTCCATCTTATGAACTGTTTTTCTAAAGC-AGACCAA-TGTTTTC-CC  97

seq1  TTCTAGGGATAAT-GGAAAGAATGATCTGA-GCAGAACGATGTAAATTAA  145
       || |||| |||| ||||||| ||||  || |||||||||||| | | ||
seq2  GTCAAGGGTTAATGGGAAAGATTGATGCGATGCAGAACGATGTCATTAAA  147

seq1  AACTCCTCATGAGTCAGTCCATGATTTCCTATAAAGTAGAGATTGAATAT  195
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTCATGAGTCAGTCCATGATTTCCTATAAAGTAGAGATTGAATAT  197

seq1  TGCTTATAGCTTATTAAGGACCTCATTTCATTTTCTGAACAATAATAAGA  245
       |||| ||| ||||||||||| |||||||||||||||| | |||||||||
seq2  GGCTTTTAG-TTATTAAGGACTTCATTTCATTTTCTGACCTATAATAAGA  246

seq1  CTAAAGGTCCATGGCACTTTAAGTAAGGTGTATTTGTACAATATGGAACT  295
       ||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  TTAAAGGTCCATAGCACTTTAAGTAAGGTGTA-TTGTACAATATGGAACT  295

seq1  TTATTCTATGAGAAAAAAGAATTAACATTTAATAAGTCCATAAAAAGCAT  345
      ||||| ||||||| ||  ||||| ||||||||||||||||||||||||||
seq2  TTATTTTATGAGACAAGCGAATTCACATTTAATAAGTCCATAAAAAGCAT  345

seq1  ATGTTGCTACGTTTATCCATTCAATATGTACATTGCCATTTACTGAAACA  395
      |||||| |||||||||||||||||||||||||| ||||||||||||||||
seq2  ATGTTGATACGTTTATCCATTCAATATGTACATCGCCATTTACTGAAACA  395

seq1  AAATCAATTGAAGTAGGAAGATATCAAAATTTCACAAAGAAGGAAAGTAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATTGAAGTAGGAAGATATCAAAATTTCACAAAGAAGGAAAGTAG  445

seq1  AACAAAGAGAAATGAATTATGACATGATGGGAACCTGACATTCACTGCTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGAGAAATGAATTATGACATGATGGGAACCTGACATTCACTGCTG  495

seq1  CTAAGGCTTCTCAGAGAACAGAAGGAAAGAAATTAATGTCATTGATGTTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGCTTCTCAGAGAACAGAAGGAAAGAAATTAATGTCATTGATGTTG  545

seq1  CAAACATGAGAGTGTTTCATGGACATTTCAGTGGTCCAACCATTTTACAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATGAGAGTGTTTCATGGACATTTCAGTGGTCCAACCATTTTACAG  595

seq1  ATAAAAAAATTTGAACATGAAAGATTTTTTTCTTTTAAATTGACCCTAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAATTTGAACATGAAAGATTTTTTTCTTTTAAATTGACCCTAAA  645

seq1  AAGTAAATGCTAACAAATTTTCTTTAGTAAAGAAGCTCAATTTCTCAATG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATGCTAACAAATTTTCTTTAGTAAAGAAGCTCAATTTCTCAATG  695

seq1  GATAAAAGATTTTTTAATATAATTTTATGAAGCATTCCTTAAATGTGTAG  745
      |||||||||||||||||||||||||||||||||| ||  |||||||||||
seq2  GATAAAAGATTTTTTAATATAATTTTATGAAGCACTCTCTAAATGTGTAG  745

seq1  GAAAAAGTCCCTGGGAACGGCTTTGTGTATATATGAGAACTGGACAAGCT  795
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAAAAAGTCCCTGGGAAAGGCTTTGTGTATATATGAGAACTGGACAAGCT  795

seq1  CAACAAGAGTTTCTTTCCTTGAATGTGAATAGTACTTAGAACAACTACAA  845
      || |||||||||||||||| |||||||||||||| || |||||| | |||
seq2  CACCAAGAGTTTCTTTCCTAGAATGTGAATAGTAATTCGAACAAGTTCAA  845

seq1  TTCAAGGGTAGAACTTAAGCGATGCAGGGAAAACTAATTTGAAATGAACT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGGTAGAACTTAAGCGATGCAGGGAAAACTAATTTGAAATGAACT  895

seq1  TCTATAAGATTACAAAGTCAAAACATAAAAACATATTAAACTATACTTAA  945
      |||||||||||||||||||||||||||||||||||||||   ||||||||
seq2  TCTATAAGATTACAAAGTCAAAACATAAAAACATATTAAGGAATACTTAA  945

seq1  CAAAAGATACTCTGTGTGTGTGTGTATAATACCTAAGAATAGAGATAAGG  995
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAAAAGATACTCAGTGTGTGTGTGTATAATACCTAAGAATAGAGATAAGG  995

seq1  AATTC  1000
      |||||
seq2  AATTC  1000