BAC Information

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BAC

Clone NameB6Ng01-014L22
Chromosome5 (Build37)
Map Location 117,491,927 - 117,669,719
singlet/doubletdoublet
Overlap geneLOC665073, Suds3, Taok3
Upstream geneLOC545798, Ccdc60, 4930562A09Rik, Hspb8, 1500001A10Rik, LOC433943, Gm1684
Downstream genePebp1, LOC100042313, LOC100039359, BC023744, LOC667175, Wsb2, Rfc5, Ksr2, Nos1, Fbxo21, Tesc, Fbxw8, Hrk, Tmem118
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014L22.bB6Ng01-014L22.g
ACCDH849201DH849202
length1,0241,093
definitionDH849201|Mus musculus domesticus DNA, BAC clone: B6Ng01-014L22, 5' end.DH849202|Mus musculus domesticus DNA, BAC clone: B6Ng01-014L22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,668,701 - 117,669,719)(117,491,927 - 117,492,994)
sequence
gaattcaggattctttaaaaaatacagaaatattataagaatgtgttatt
gttttaatctcaggtgtgagatatggggctgcttcgcaggaggtgactat
aatttgcctcgtgctctatcaggggcggggtttcaccagctgcaaatagg
ttctgcgattgtgtgatgtttggaagtctggggaatttttagaggtagat
aaatgctagggccctcagaggtagggtcagtgcttgttggtcattcaggg
gggttggctgtgacttgttaatagttgtgctcaaagaagaaactacaaga
aagaaattagattcagggggtctctccctccccctctatcctttctctcc
tatctaaggatagggtgtgaaacaggagggacataaacagtggggaaaag
aagaacccacaaagcagcaaaggccagctacacatatatgtatatatatg
tgtgtgtatgaacacactttcccagcatacaccggttcctgggttccgtc
ctcactgcatagctgtttcctcctagattaaagccttccaagcctgttaa
ggtgtgggaaggcagaagagcatgttctaagcagagataaaacacttcat
cctacaaggaaggaaacaactcagagctttcaggaagtcccgaaaccgga
ctcactagattcactagactttccctcctagcatgtacaacatgttgtta
aggactgctgagggcacgttcggagcagctgagatacctgcctgcaggct
gtgcagtgggctccaggtgtccagctttgtgatctgtcaccttggcctgg
ggcgggctttggtgatgcagcctcttgggtcatttctactcctgtaactc
ctcacccattattcccgtaagcatggtgcagtgagactcagggttcacca
agttgggactggggcctgtctcagatcttatcttgcaggagtagccagct
gcttgtatcctccaggagatcacatgtcacacttgatttcatgtgtcacc
gtgtggtgtgtggatttgtacatg
gaattctatcctcagaagccagagacagggcatctccagggcaaactggc
cagcaagactagccatatcggtgagctctgggtttgattgagagaccctg
cctctatggataaggtggaagtgtgagggagggtgactcccaacatcagc
cctgggcctccacatgcatgtgcagtacccacgacacacacacacacaaa
catgcatacacagacatgcacattctatacacatacacaccctcatacac
acacacacacacacacacatacacattcccaccaacaggcaaacacagac
atgcacatgtcacacacacaaataaaaaatgaaaaaaaataagataataa
cagcagcattgatttaaaagaaaaaaaaaaaactacagaaaatacccact
cacctccaagataaatgaagtcaacatttcattctagaaatcatgaaatg
accgacctatttaaaatcctcaaggatataaaaagtgagccataactctc
tatccaaagctgatgttcaaacaaaattaaattgggaaagcaattcccta
aatattcagaataaagcaaaacaaacagatctaaatacatattcagttgg
tagctaccataaccacatagacaagagtggtttttaacatctttaaagaa
aacttaccttatgcctcaataatatttttaaatttaaaaaagtaacagta
cagtcagaagagttaaaaacaagtgttcaaacaaattttattacgattat
tcgcaacggccagaaagttgggagagtacagcctaccactgatggatggt
aagaaattttttggtgttatcgtaatctagtctctatttcctaacagttg
attttctttagaagcagatgccatggaggggttactgccttactggcttg
ctcccattggccccgcttcagcctgcttttctttgaagaccctggacttg
cctgcccagatggctccgccccacaatggggcgggggcgcgggccaatcc
ccctatcattcacctaagaaatatgccctactggcttgcctataccgatg
tgttcctatgaaagcatttcctttaatgagggttccctaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_117668701_117669719
seq2: B6Ng01-014L22.b_46_1069 (reverse)

seq1  CATGTACATAT-CACACA-CACACGTTGACACATGAAATCATGTGTGACA  48
      |||||||| || |||||| |||||| ||||||||||||||| ||||||||
seq2  CATGTACAAATCCACACACCACACGGTGACACATGAAATCAAGTGTGACA  50

seq1  TGTGATCTCCTGTGAAGATACAAGCAGCTGGCTACTCCCTGC-AGATAAG  97
      |||||||||||| || |||||||||||||||||||| ||||| |||||||
seq2  TGTGATCTCCTG-GAGGATACAAGCAGCTGGCTACT-CCTGCAAGATAAG  98

seq1  ATCTGAGGACAGGCCCAAGT-CCAACTTGGTGAACCCTGAGTCTCACTGC  146
      |||||| ||||||||| ||| |||||||||||||||||||||||||||||
seq2  ATCTGA-GACAGGCCCCAGTCCCAACTTGGTGAACCCTGAGTCTCACTGC  147

seq1  A-CATGCTTACGGGAAT-ATGGGTGAGGAGTTACAGGAGTAGAAATGACC  194
      | ||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACCATGCTTACGGGAATAATGGGTGAGGAGTTACAGGAGTAGAAATGACC  197

seq1  C-AGAGGCTGCATCACCAAAGCCCGCCCCAGGCC-AGGTGACAGATCACA  242
      | |||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAAGAGGCTGCATCACCAAAGCCCGCCCCAGGCCAAGGTGACAGATCACA  247

seq1  AAGCTGGACACCTGGAGCCCACTGCACAGCCTGCAGGCAGGTATCTCAGC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGACACCTGGAGCCCACTGCACAGCCTGCAGGCAGGTATCTCAGC  297

seq1  TGCTCCGAACGTGCCCTCAGCAGTCCTTAACAACATGTTGTACATGCTAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCGAACGTGCCCTCAGCAGTCCTTAACAACATGTTGTACATGCTAG  347

seq1  GAGGGAAAGTCTAGTGAATCTAGTGAGTCCGGTTTCGGGACTTCCTGAAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAAGTCTAGTGAATCTAGTGAGTCCGGTTTCGGGACTTCCTGAAA  397

seq1  GCTCTGAGTTGTTTCCTTCCTTGTAGGATGAAGTGTTTTATCTCTGCTTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAGTTGTTTCCTTCCTTGTAGGATGAAGTGTTTTATCTCTGCTTA  447

seq1  GAACATGCTCTTCTGCCTTCCCACACCTTAACAGGCTTGGAAGGCTTTAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGCTCTTCTGCCTTCCCACACCTTAACAGGCTTGGAAGGCTTTAA  497

seq1  TCTAGGAGGAAACAGCTATGCAGTGAGGACGGAACCCAGGAACCGGTGTA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAGGAAACAGCTATGCAGTGAGGACGGAACCCAGGAACCGGTGTA  547

seq1  TGCTGGGAAAGTGTGTTCATACACACACATATATATACATATATGTGTAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAAAGTGTGTTCATACACACACATATATATACATATATGTGTAG  597

seq1  CTGGCCTTTGCTGCTTTGTGGGTTCTTCTTTTCCCCACTGTTTATGTCCC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTTGCTGCTTTGTGGGTTCTTCTTTTCCCCACTGTTTATGTCCC  647

seq1  TCCTGTTTCACACCCTATCCTTAGATAGGAGAGAAAGGATAGAGGGGGAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTTCACACCCTATCCTTAGATAGGAGAGAAAGGATAGAGGGGGAG  697

seq1  GGAGAGACCCCCTGAATCTAATTTCTTTCTTGTAGTTTCTTCTTTGAGCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGACCCCCTGAATCTAATTTCTTTCTTGTAGTTTCTTCTTTGAGCA  747

seq1  CAACTATTAACAAGTCACAGCCAACCCCCCTGAATGACCAACAAGCACTG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATTAACAAGTCACAGCCAACCCCCCTGAATGACCAACAAGCACTG  797

seq1  ACCCTACCTCTGAGGGCCCTAGCATTTATCTACCTCTAAAAATTCCCCAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTACCTCTGAGGGCCCTAGCATTTATCTACCTCTAAAAATTCCCCAG  847

seq1  ACTTCCAAACATCACACAATCGCAGAACCTATTTGCAGCTGGTGAAACCC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAAACATCACACAATCGCAGAACCTATTTGCAGCTGGTGAAACCC  897

seq1  CGCCCCTGATAGAGCACGAGGCAAATTATAGTCACCTCCTGCGAAGCAGC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCTGATAGAGCACGAGGCAAATTATAGTCACCTCCTGCGAAGCAGC  947

seq1  CCCATATCTCACACCTGAGATTAAAACAATAACACATTCTTATAATATTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATCTCACACCTGAGATTAAAACAATAACACATTCTTATAATATTT  997

seq1  CTGTATTTTTTAAAGAATCCTGAATTC  1019
      |||||||||||||||||||||||||||
seq2  CTGTATTTTTTAAAGAATCCTGAATTC  1024

seq1: chr5_117491927_117492994
seq2: B6Ng01-014L22.g_65_1157

seq1  GAATTCTATCCTCAGAAGCCAGAGACAGGGCATCTCCAGGGCAAACTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCTCAGAAGCCAGAGACAGGGCATCTCCAGGGCAAACTGGC  50

seq1  CAGCAAGACTAGCCATATCGGTGAGCTCTGGGTTTGATTGAGAGACCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGACTAGCCATATCGGTGAGCTCTGGGTTTGATTGAGAGACCCTG  100

seq1  CCTCTATGGATAAGGTGGAAGTGTGAGGGAGGGTGACTCCCAACATCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATGGATAAGGTGGAAGTGTGAGGGAGGGTGACTCCCAACATCAGC  150

seq1  CCTGGGCCTCCACATGCATGTGCAGTACCCACGACACACACACACACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCCTCCACATGCATGTGCAGTACCCACGACACACACACACACAAA  200

seq1  CATGCATACACAGACATGCACATTCTATACACATACACACCCTCATACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATACACAGACATGCACATTCTATACACATACACACCCTCATACAC  250

seq1  ACACACACACACACACACATACACATTCCCACCAACAGGCAAACACAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACATACACATTCCCACCAACAGGCAAACACAGAC  300

seq1  ATGCACATGTCACACACACAAATAAAAAATGAAAAAAAATAAGATAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATGTCACACACACAAATAAAAAATGAAAAAAAATAAGATAATAA  350

seq1  CAGCAGCATTGATTTAAAAGAAAAAAAAAAAACTACAGAAAATACCCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCATTGATTTAAAAGAAAAAAAAAAAACTACAGAAAATACCCACT  400

seq1  CACCTCCAAGATAAATGAAGTCAACATTTCATTCTAGAAATCATGAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCAAGATAAATGAAGTCAACATTTCATTCTAGAAATCATGAAATG  450

seq1  ACCGACCTATTTAAAATCCTCAAGGATATAAAAAGTGAGCCATAACTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGACCTATTTAAAATCCTCAAGGATATAAAAAGTGAGCCATAACTCTC  500

seq1  TATCCAAAGCTGATGTTCAAACAAAATTAAATTGGGAAAGCAATTCCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAAAGCTGATGTTCAAACAAAATTAAATTGGGAAAGCAATTCCCTA  550

seq1  AATATTCAGAATAAAGCAAAACAAACAGATCTAAATACATATTCAGTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAGAATAAAGCAAAACAAACAGATCTAAATACATATTCAGTTGG  600

seq1  TAGCTACCATAACCACATAGACAAGAGTGGTTTTTAACATCTTTAAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACCATAACCACATAGACAAGAGTGGTTTTTAACATCTTTAAAGAA  650

seq1  AACTTACCTTATGCCTCAATAATATTTTTAAA-TTAAAAAAGTAACAGTA  699
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AACTTACCTTATGCCTCAATAATATTTTTAAATTTAAAAAAGTAACAGTA  700

seq1  CAGTCAGAAGAGTTAAAAACAAGTGTTCAAAC-AATTTTATTACGATTAT  748
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGTCAGAAGAGTTAAAAACAAGTGTTCAAACAAATTTTATTACGATTAT  750

seq1  TCGCAACGGCCAGAAAGTTGGGAGAGTACAGCCTACCACTGATGGATTGG  798
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCGCAACGGCCAGAAAGTTGGGAGAGTACAGCCTACCACTGATGGA-TGG  799

seq1  TAAGAAA-TATTTGGTG-TATCGTAATCTAGTTTCTATTT-CTAACAG-T  844
      ||||||| | ||||||| |||||||||||||| ||||||| ||||||| |
seq2  TAAGAAATTTTTTGGTGTTATCGTAATCTAGTCTCTATTTCCTAACAGTT  849

seq1  GATAT--CTTAG-AGCAGATGCCATGGAGGGG-TACTG-CTTACTGGCTT  889
      ||| |   |||| ||||||||||||||||||| ||||| |||||||||||
seq2  GATTTTCTTTAGAAGCAGATGCCATGGAGGGGTTACTGCCTTACTGGCTT  899

seq1  GCTCCCAT--GGCTCGC-TCAGCCTGC-TTTCTTTGAGAACCCTGGAC-T  934
      ||||||||  | | ||| ||||||||| |||||||||  ||||||||| |
seq2  GCTCCCATTGGCCCCGCTTCAGCCTGCTTTTCTTTGAAGACCCTGGACTT  949

seq1  GCCTGCCCAGGATGGCTCCG-CCCACAATGGG--CGGGGCGCGGGGCCAT  981
      ||||||||| |||||||||| |||||||||||   |||||||||| | ||
seq2  GCCTGCCCA-GATGGCTCCGCCCCACAATGGGGCGGGGGCGCGGGCCAAT  998

seq1  CCCCC-ATCAATCA-CTAAGAAA-ATGCCCTACTGGCTTGCC--TACCGA  1026
      ||||| |||| ||| |||||||| ||||||||||||||||||  ||||||
seq2  CCCCCTATCATTCACCTAAGAAATATGCCCTACTGGCTTGCCTATACCGA  1048

seq1  T-TGTTCCTATGAAGGCATTTTC-TTATTGA-GGTTCCCTAATCT  1068
      | |||||||||||| |||||| | ||| ||| |||||||||||||
seq2  TGTGTTCCTATGAAAGCATTTCCTTTAATGAGGGTTCCCTAATCT  1093