BAC Information

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BAC

Clone NameB6Ng01-022L18
Chromosome5 (Build37)
Map Location 126,638,058 - 126,782,633
singlet/doubletdoublet
Overlap genenone
Upstream geneNcor2, Scarb1, Ubc, Dhx37, Bri3bp, Aacs, Tmem132b, EG231736, LOC100039178, LOC665760
Downstream geneLOC100040327, Tmem132c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022L18.bB6Ng01-022L18.g
ACCDH854858DH854859
length851984
definitionDH854858|Mus musculus domesticus DNA, BAC clone: B6Ng01-022L18, 5' end.DH854859|Mus musculus domesticus DNA, BAC clone: B6Ng01-022L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,638,058 - 126,638,907)(126,781,652 - 126,782,633)
sequence
gaattcttccagtgtggttatattaatggagtaatctgattttgaactta
accatgatttaatgagcacagttccatcgcaaaacttgtgggagttcagc
gattaaactaaatgtagtcttggcttctaagttgaacatataatctcagt
caactcgagtctaatggtattctaaaccttacatgctaaagcaagttgat
tcaagaacaaaaatgaaggctagatactctgcaggtgctttttaaatgcc
tccagagaagaccattgagttagacacatggagatgaattaaattcagca
gcagaaacctatatttgactgtttgagattccagtgtaacctgactctgc
catttaacatttctactgggaaaaggaaatctctgcccctattaagagga
aagtggaactcagcagggatgaaactgactgccaagttctaaaaattcag
agaaatgtggaatggtgcctgggcacaatgggaggaagataagaatgagg
aagcatgcataaggactgaaacccaaaatctacagtggtgggtaaaagac
tagaaaatagttcattgtgaagataagagtgccacatgtagaggtaacta
ttgtccacaagtatgctatccattttatgctttcatacacctgcccatcc
atccattcatctatcaatccatccatctacacattggtccattggtgcat
gcaactatatagacatacagccatcaatccacccacacaccagtgctttc
attcatctatctatgcatccatttatgtatccatgcacaaatccattcat
ccatgcacccacacatctatctatccatacatccattcattcatgcatcc
t
gaattctagagatgcgtgaccaacatccatctggctggatttttctttac
tttgtggatgtttggaagcactggcctgtgtttccatgtgagcagcaggt
tagatcaccttttgaatgtgtcaggtgggtcggtggctggctgtgattct
cactcatccctgttcacaccggtactaaaagagggtgcaaccactagctg
cagaagaggctggctgaaatggaaaagtggttggaggtgattctatcagt
aaagataagcaaggtaacggatctgatataacgtttgagagaaaagtggg
agaaacctgattctggaatagtcaccattttctgtatttgtggagactct
tgaaggactctaaaagggcagaagattcaacagcctgcttctaaaatgtg
tttttgtatgtctgagtatttcatctgcatgtgtgtatgtgcactacata
tgtgaagttcccgagagtccagaagaggacttcagcccagaaccgatatt
acagacagttctgtgcagtcatgtagattctaggaattgaactcagatcg
tctgaaagagtgctcagtgctcttaaccactgagccatctctccagtccc
atcaatggcctattttttttcactgttgggtttcactgtttgttcttaaa
tttaggtgagataattagatgttttccacaaggacctctaccactcaaca
atgaagtttttaatagctttttaccttaaaattcctgcctttgtgtctat
atgacactacagttactttcattattagatcctgagaaagaaatggctaa
aggcgagaagacagtacacttacaatgcagttgaagaatactgtgcacac
aacttctccaccaagacaatagggtggctcaacattggtgctatttatac
aattttctctggtgtagaatgttccattctggactcagaagtacacaact
caaagtcttaggaggcccagaaactgaacagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_126638058_126638907
seq2: B6Ng01-022L18.b_36_886

seq1  GAATTCTTCCAGTGTGGTTATATTAATGGAGTAATCTGATTTTGAACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCAGTGTGGTTATATTAATGGAGTAATCTGATTTTGAACTTA  50

seq1  ACCATGATTTAATGAGCACAGTTCCATCGCAAAACTTGTGGGAGTTCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGATTTAATGAGCACAGTTCCATCGCAAAACTTGTGGGAGTTCAGC  100

seq1  GATTAAACTAAATGTAGTCTTGGCTTCTAAGTTGAACATATAATCTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAACTAAATGTAGTCTTGGCTTCTAAGTTGAACATATAATCTCAGT  150

seq1  CAACTCGAGTCTAATGGTATTCTAAACCTTACATGCTAAAGCAAGTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCGAGTCTAATGGTATTCTAAACCTTACATGCTAAAGCAAGTTGAT  200

seq1  TCAAGAACAAAAATGAAGGCTAGATACTCTGCAGGTGCTTTTTAAATGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAACAAAAATGAAGGCTAGATACTCTGCAGGTGCTTTTTAAATGCC  250

seq1  TCCAGAGAAGACCATTGAGTTAGACACATGGAGATGAATTAAATTCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGAAGACCATTGAGTTAGACACATGGAGATGAATTAAATTCAGCA  300

seq1  GCAGAAACCTATATTTGACTGTTTGAGATTCCAGTGTAACCTGACTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAACCTATATTTGACTGTTTGAGATTCCAGTGTAACCTGACTCTGC  350

seq1  CATTTAACATTTCTACTGGGAAAAGGAAATCTCTGCCCCTATTAAGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAACATTTCTACTGGGAAAAGGAAATCTCTGCCCCTATTAAGAGGA  400

seq1  AAGTGGAACTCAGCAGGGATGAAACTGACTGCCAAGTTCTAAAAATTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAACTCAGCAGGGATGAAACTGACTGCCAAGTTCTAAAAATTCAG  450

seq1  AGAAATGTGGAATGGTGCCTGGGCACAATGGGAGGAAGATAAGAATGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTGGAATGGTGCCTGGGCACAATGGGAGGAAGATAAGAATGAGG  500

seq1  AAGCATGCATAAGGACTGAAACCCAAAATCTACAGTGGTGGGTAAAAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGCATAAGGACTGAAACCCAAAATCTACAGTGGTGGGTAAAAGAC  550

seq1  TAGAAAATAGTTCATTGTGAAGATAAGAGTGCCACATGTAGAGGTAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATAGTTCATTGTGAAGATAAGAGTGCCACATGTAGAGGTAACTA  600

seq1  TTGTCCACAAGTATGCTATCCA-TTTATGCTTTCATACACCTGCCCATCC  649
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTGTCCACAAGTATGCTATCCATTTTATGCTTTCATACACCTGCCCATCC  650

seq1  ATCCATTCATCTATCAATCCATCCATCTACACATTGGTCCATTGGTGCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTCATCTATCAATCCATCCATCTACACATTGGTCCATTGGTGCAT  700

seq1  GCAACTATATAGACATACAGCCATCAATCCACCCACACACCAGTGCTTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTATATAGACATACAGCCATCAATCCACCCACACACCAGTGCTTTC  750

seq1  ATTCATCTATCTATGCATCCATTTATGTATCCATGCACAAATCCATTCAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTATCTATGCATCCATTTATGTATCCATGCACAAATCCATTCAT  800

seq1  CCATGCACCCACACATCTATCTATCCATACATCCATCCATTCATGCATCC  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCATGCACCCACACATCTATCTATCCATACATCCATTCATTCATGCATCC  850

seq1  T  850
      |
seq2  T  851

seq1: chr5_126781652_126782633
seq2: B6Ng01-022L18.g_68_1051 (reverse)

seq1  CATCTGTTCAGTTTCTGGGACTTCCTAAGACTTCTGAGTTGTGTACTTTC  50
      ||||||||||||||||||| | ||||||||||| |||||||||||| |||
seq2  CATCTGTTCAGTTTCTGGG-CCTCCTAAGACTT-TGAGTTGTGTAC-TTC  47

seq1  TGAGTCCAGAATGGAACATTTCAACA-CAGAGAAAATTGCTATAAAATAG  99
      |||||||||||||||||| ||| ||| |||||||||||| ||| ||||||
seq2  TGAGTCCAGAATGGAACA-TTCTACACCAGAGAAAATTG-TAT-AAATAG  94

seq1  CACCAATGATGAGCCACCCTATTGTCTTGGTGGAGAAGTTGTGTGCACAG  149
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATGTTGAGCCACCCTATTGTCTTGGTGGAGAAGTTGTGTGCACAG  144

seq1  TTATTCTTCAACTGCATTGTAAGTGTACTGTCTTCTCGCCTTTAGCCATT  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TATTCTTCAACTGCATTGTAAGTGTACTGTCTTCTCGCCTTTAGCCATT  193

seq1  TCTTTCTCAGGATCTAAT-ATG-AAGT-ACTGTAGTGTCATATAGACACA  246
      |||||||||||||||||| ||| |||| ||||||||||||||||||||||
seq2  TCTTTCTCAGGATCTAATAATGAAAGTAACTGTAGTGTCATATAGACACA  243

seq1  AAGGCAGGAA-TTTAAGGT-AAAAGCTATT-AAAACTTCATTGTTGAGTG  293
      |||||||||| |||||||| |||||||||| |||||||||||||||||||
seq2  AAGGCAGGAATTTTAAGGTAAAAAGCTATTAAAAACTTCATTGTTGAGTG  293

seq1  GTAGAGGTCCTTGTGG-AAACATCTAATTATCTCACCTAAATTTAAGAAC  342
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTAGAGGTCCTTGTGGAAAACATCTAATTATCTCACCTAAATTTAAGAAC  343

seq1  -AACAGTGAAACCCAACAGTGAAAAAAAATAGGCCATTGATGGGACTGGA  391
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTGAAACCCAACAGTGAAAAAAAATAGGCCATTGATGGGACTGGA  393

seq1  GAGATGGCTCAGTGGTTAAGAGCACTGAGCACTCTTTCAGACGATCTGAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGCTCAGTGGTTAAGAGCACTGAGCACTCTTTCAGACGATCTGAG  443

seq1  TTCAATTCCTAGAATCTACATGACTGCACAGAACTGTCTGTAATATCGGT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTCCTAGAATCTACATGACTGCACAGAACTGTCTGTAATATCGGT  493

seq1  TCTGGGCTGAAGTCCTCTTCTGGACTCTCGGGAACTTCACATATGTAGTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCTGAAGTCCTCTTCTGGACTCTCGGGAACTTCACATATGTAGTG  543

seq1  CACATACACACATGCAGATGAAATACTCAGACATACAAAAACACATTTTA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACACACATGCAGATGAAATACTCAGACATACAAAAACACATTTTA  593

seq1  GAAGCAGGCTGTTGAATCTTCTGCCCTTTTAGAGTCCTTCAAGAGTCTCC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGCTGTTGAATCTTCTGCCCTTTTAGAGTCCTTCAAGAGTCTCC  643

seq1  ACAAATACAGAAAATGGTGACTATTCCAGAATCAGGTTTCTCCCACTTTT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATACAGAAAATGGTGACTATTCCAGAATCAGGTTTCTCCCACTTTT  693

seq1  CTCTCAAACGTTATATCAGATCCGTTACCTTGCTTATCTTTACTGATAGA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAACGTTATATCAGATCCGTTACCTTGCTTATCTTTACTGATAGA  743

seq1  ATCACCTCCAACCACTTTTCCATTTCAGCCAGCCTCTTCTGCAGCTAGTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTCCAACCACTTTTCCATTTCAGCCAGCCTCTTCTGCAGCTAGTG  793

seq1  GTTGCACCCTCTTTTAGTACCGGTGTGAACAGGGATGAGTGAGAATCACA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCACCCTCTTTTAGTACCGGTGTGAACAGGGATGAGTGAGAATCACA  843

seq1  GCCAGCCACCGACCCACCTGACACATTCAAAAGGTGATCTAACCTGCTGC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCACCGACCCACCTGACACATTCAAAAGGTGATCTAACCTGCTGC  893

seq1  TCACATGGAAACACAGGCCAGTGCTTCCAAACATCCACAAAGTAAAGAAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGGAAACACAGGCCAGTGCTTCCAAACATCCACAAAGTAAAGAAA  943

seq1  AATCCAGCCAGATGGATGTTGGTCACGCATCTCTAGAATTC  982
      |||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGCCAGATGGATGTTGGTCACGCATCTCTAGAATTC  984