BAC Information

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BAC

Clone NameB6Ng01-027O15
Chromosome5 (Build37)
Map Location 84,069,276 - 84,070,162
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039434, Srd5a2l2
Downstream geneLOC100039608, LOC231368, Epha5, LOC100039489
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027O15.bB6Ng01-027O15.g
ACCDH858530DH858531
length8791,182
definitionDH858530|Mus musculus domesticus DNA, BAC clone: B6Ng01-027O15, 5' end.DH858531|Mus musculus domesticus DNA, BAC clone: B6Ng01-027O15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctacttttttttttttaactctgagtgaaatcatttctgctt
caaaagaagtttgctgttactgcagttctagaaattaaagcagtccttat
tattataataacctgaatagttctgctggtgataatgactgctgaagaac
cttgttgttaattgatatctgaactacatatttccaaggttcacatatta
gaaaattcctggcagtttttatatgagagaggaaattcttctaaaataat
ttgaatttccttgagacagtaataaaatgaatttatacatggtcctgaat
ctacaacattacatttgaggcatgatatggatctttgttggatcttcacg
tttcctaattaaaccatttggtcttgtaaagaataaggaaaatcttcaac
ttattcccatgttaagaagtactatttcaaatagaatagaatagaataga
atagaatagaatagatagatagatagatagatagatagatagatagatag
atatagacagacagacagacagacagacaaacagatagatagatagatat
acagtaagttattgactcatttccaaatgctattttatatcattaatcat
ttctaagaattatcatttgttgctaagtccaaattcaatatgttgagcat
tcgctgaacattctaccagtacttgtgtaggaggcatataaaatcaaaac
atgggaaaacgtctctgtgggttctgcacatggaaatgggcaagtgttat
taacctcatttgattgtagtgtggcccataaaaatatggggcaaacttta
aatggcactatttaaatgacatgctcatgaaacgtggcaaatgaatctca
aggaaggcaacttatagactgtaattttc
gaattcacaaaatacctgagatagacaaaccaatactgagaaaaaagaac
aacattggaggctttgccacatacaatcccattggaccacagattcctgc
taatagaacaacatggaaatggcacaaagagagacacatacactaatgga
atatatatatattgagagacacatacactaatggatggaatagagaatac
atatatattgagagagatctatctatctatctatatagagagctatctat
ctatctatctatctatctatctatctatgtatagaacttttcacaaatga
tagtgggaaactttgatatgtcaagatattgagaaatgaaactttcatcc
tgcaaaaaaaaagctccaaatagataaaatatgtccaaatataatcccaa
actccaatacttgcagaagaaaaggcaaaacatatgatacatggtacaat
cataggtaaggactttgtaaattagattcttgttcaggaaatgaggttaa
tacttgacaaacaagcagtcatagcactaaaaagcttccatatagcaaaa
gaaatactcatctgggtgaagaggcagcctaaagagagtgagaaaaatct
ccacaagctatgcatctaaaagaggattaatgtggagaatgcacaaagaa
cccaagaaacaaacaaacaaacaaacaaacaaacaagaaaccataatgaa
aacaaacaacagagtcagtaaacaggctgcataactgaattgagttctca
aagtgataaataaagtataaaaggatttaatatcctctcccagcagaaaa
cacaaattaatttatttgagattccatattatttgtgtacaaattctaat
tatcagaattttcatgacagcaaatgttgataagatgtaaagaaagagga
atcttttattcattgacgtggggtgaaactgttcaaagagtgtggaaata
ctacagagtctcccaagagctagaagactttactttattgtctcattata
acccctagcattattaaaaactgtcttaatctacttaggaacttgtctgc
atttttcagattattctgtaagcttaaacagtacagtcaatttctcatgc
cgttgagtgtcactattattcctgatgaaaggaatcatttaaccgtatca
gagaagcaaacattcttcaaaagcaagtatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_84069276_84070162
seq2: B6Ng01-027O15.b_42_920 (reverse)

seq1  GAAATTTACAGTCTTATTAAGTTGCCTTCCCTTGAGATTCATTTTGCCAC  50
      |||| |||||||||   ||||||||||| |||||||||||| ||||||||
seq2  GAAAATTACAGTCT--ATAAGTTGCCTT-CCTTGAGATTCA-TTTGCCAC  46

seq1  GTTTCATGAGCATGTCATTTTAAATAGGTGCCATTTAAAAGTTTGCCCCA  100
      ||||||||||||||||| |||||||| ||||||||| |||||||||||||
seq2  GTTTCATGAGCATGTCA-TTTAAATA-GTGCCATTT-AAAGTTTGCCCCA  93

seq1  TATTTTTATGGGCCACACTACAATCAAATGAGGTTAAATAACACTTGCCC  150
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATTTTTATGGGCCACACTACAATCAAATGAGGTT-AATAACACTTGCCC  142

seq1  ATTTCCATGTGCAGAACCCACAGAGACGTTTTCCCATGTTTTGATTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATGTGCAGAACCCACAGAGACGTTTTCCCATGTTTTGATTTTAT  192

seq1  ATGCCTCCTACACAAGTACTGGTAGAATGTTCAGCGAATGCTCAACATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCCTACACAAGTACTGGTAGAATGTTCAGCGAATGCTCAACATAT  242

seq1  TGAATTTGGACTTAGCAACAAATGATAATTCTTAGAAATGATTAATGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGGACTTAGCAACAAATGATAATTCTTAGAAATGATTAATGATA  292

seq1  TAAAATAGCATTTGGAAATGAGTCAATAACTTACTGTATATCTATCTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGCATTTGGAAATGAGTCAATAACTTACTGTATATCTATCTATC  342

seq1  TATCTGTTTGTCTGTCTGTCTGTCTGTCTGTCTATATCTATCTATCTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTTTGTCTGTCTGTCTGTCTGTCTGTCTATATCTATCTATCTATC  392

seq1  TATCTATCTATCTATCTATCTATCTATTCTATTCTATTCTATTCTATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCTATCTATCTATCTATCTATTCTATTCTATTCTATTCTATTCT  442

seq1  ATTCTATTTGAAATAGTACTTCTTAACATGGGAATAAGTTGAAGATTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATTTGAAATAGTACTTCTTAACATGGGAATAAGTTGAAGATTTTC  492

seq1  CTTATTCTTTACAAGACCAAATGGTTTAATTAGGAAACGTGAAGATCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTTTACAAGACCAAATGGTTTAATTAGGAAACGTGAAGATCCAA  542

seq1  CAAAGATCCATATCATGCCTCAAATGTAATGTTGTAGATTCAGGACCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATCCATATCATGCCTCAAATGTAATGTTGTAGATTCAGGACCATG  592

seq1  TATAAATTCATTTTATTACTGTCTCAAGGAAATTCAAATTATTTTAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTCATTTTATTACTGTCTCAAGGAAATTCAAATTATTTTAGAAG  642

seq1  AATTTCCTCTCTCATATAAAAACTGCCAGGAATTTTCTAATATGTGAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTCTCTCATATAAAAACTGCCAGGAATTTTCTAATATGTGAACC  692

seq1  TTGGAAATATGTAGTTCAGATATCAATTAACAACAAGGTTCTTCAGCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATATGTAGTTCAGATATCAATTAACAACAAGGTTCTTCAGCAGT  742

seq1  CATTATCACCAGCAGAACTATTCAGGTTATTATAATAATAAGGACTGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCACCAGCAGAACTATTCAGGTTATTATAATAATAAGGACTGCTT  792

seq1  TAATTTCTAGAACTGCAGTAACAGCAAACTTCTTTTGAAGCAGAAATGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTAGAACTGCAGTAACAGCAAACTTCTTTTGAAGCAGAAATGAT  842

seq1  TTCACTCAGAGTTAAAAAAAAAAAAGTAGAAGAATTC  887
      |||||||||||||||||||||||||||||||||||||
seq2  TTCACTCAGAGTTAAAAAAAAAAAAGTAGAAGAATTC  879