BAC Information

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BAC

Clone NameB6Ng01-034I10
Chromosome5 (Build37)
Map Location 143,833,581 - 144,007,071
singlet/doubletdoublet
Overlap gene2810055G22Rik, Olfr718-ps1, LOC640324, LOC100042605, Rbak, 4933411G11Rik, Spdyb, Zfp12
Upstream geneFoxk1, C330006K01Rik, D930005D10Rik, Papolb, Mmd2, Wipi2, Slc29a4, Tnrc18, LOC100038954, LOC100041004, LOC100038972, LOC100038984, LOC100042525, LOC100038888, Zfp469, LOC666788, Fbxl18, D430018E03Rik, LOC100042558, Actb, Fscn1, LOC667809
Downstream geneZfp316, Gm792, E130309D02Rik, Zdhhc4, Grid2ip, Kdelr2, LOC231869, LOC670671, Daglb, Rac1, 2810453I06Rik, Pscd3, Usp42, Eif2ak1, 4921520G13Rik, Jtv1, Pms2, 4930526H21Rik, AU022870, Ocm, Lmtk2, Bhlhb8, 2210010N04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034I10.bB6Ng01-034I10.g
ACCDH863253DH863254
length954435
definitionDH863253|Mus musculus domesticus DNA, BAC clone: B6Ng01-034I10, 5' end.DH863254|Mus musculus domesticus DNA, BAC clone: B6Ng01-034I10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,006,231 - 144,007,071)(143,833,581 - 143,834,021)
sequence
gaattctgtgatggatcgtgaggtaagacatctgagaaaagaacttgcca
cagatgtagcattcatagggcttctcccctctgtgaattctccggtgtct
acagagggctgaattctggtagaaggtctttccacactcgctacactcat
agggcttcactcctgagtgagttctgtgatgcacggtgaggtaggacagc
tgcgagaataatttcccacactcgttacactcgtaaggcttctcccccgt
gtgcaccctctgatgtctcataagggctgagttcaggtagaaggacttcc
cgcactccgcacactcgtagggcttctcccccgagtgggttctgtaatgc
acggtgaggtacgacagcctggagaagaacttgccgcactcgttgcattc
gtacggcttctcgcccgtgtgcgtcctcatgtgggttgtgagcgtggact
tgcggcagaagcacttgccacactcgctgcatttgtagagtttgacgccc
gtgtggatcttctggtggtcattgagtgctgactttctgagagaacgtct
tgccacagtcgtgacaaacatagggcctctctcccgagtgcgtcctctgg
tgctgagtgagatgcgtctttctggcagaaggacttcccgcagtagccac
acttgtagggcttctcgccgagtgggttcctctggtgctgaatgaggtgc
agcttctggtaaaggtctttccgcactcggtacactcgtagggcttctcc
ccgtgtgcgtcctctggtggacggtgagggtgcccttctggcagatgact
tcccacactgactgcattgaaggctctcttctgggtgagtcctctgatgg
aggacgacttgaacttttgcagaagacttcccatacggctggcactcgta
aggctcattcctgagagaatcctggtgggcactgaggtcgacgtctgcag
gaaa
tatcccaggtggttcctgttagaccttctgtgtttgcattcctctgtttt
atgcaagaatccagtaacctctttgtaccttgctggtgtgtcacccaact
tccttattttcttctgtataaaaagtttgatgctcgatttgacaaattac
attcagattctacacaacctttcctgtgtgcatctgtctgtcattccatc
cgacgctttgcccacctgtgactagagacccgttccacgcagacaaaggg
gcccagagggtctgcggcaggatcacaagaagcactaactattcagacac
ccaaggtcactatttggcctatatgcccatggctcaaaaatctttcaaat
acatcattactaagaatgttatacagaagatgatgttcctaaaaaccaaa
aagaaaggaaaaaaaaaggggggggggtggggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_144006231_144007071
seq2: B6Ng01-034I10.b_169_998 (reverse)

seq1  TTTCCTGCAGACGTCAGACCTCAGTGCCCACCAGGATTCTCTCATGGAAA  50
      ||||||||||||||| ||||||||||||||||||||||||||||  | ||
seq2  TTTCCTGCAGACGTC-GACCTCAGTGCCCACCAGGATTCTCTCA--GGAA  47

seq1  TGAAGCCCTACGAGTGCCAGCAGTGTGGGAAGTCCTTCTGCAAAAAGTCC  100
      || |||| ||||||||||||| || |||||||| ||||||| |||||| |
seq2  TG-AGCCTTACGAGTGCCAGCCGTATGGGAAGT-CTTCTGC-AAAAGTTC  94

seq1  AAGTTCGTCATCCATCAGAGGACTCACACAGGAGAGAAGCCCTTCAAGTG  150
      ||| ||||| ||||||||||||||||| ||| |||||   ||||||| ||
seq2  AAG-TCGTCCTCCATCAGAGGACTCACCCAGAAGAGA--GCCTTCAA-TG  140

seq1  CAGTCAGTGTGGGAAGTCCTTCTGCCAGAAGGGCACCCTCACCGTCCACC  200
      ||||||||||||||||| | ||||||||||||||||||||||||||||||
seq2  CAGTCAGTGTGGGAAGT-CATCTGCCAGAAGGGCACCCTCACCGTCCACC  189

seq1  AGAGGACGCACACCGGGGAGAAGCCCTACGAGTGTACCGAGTGCGGGAAG  250
      |||||||||||| ||||||||||||||||||||||||||||||||| |||
seq2  AGAGGACGCACA-CGGGGAGAAGCCCTACGAGTGTACCGAGTGCGGAAAG  238

seq1  ACCTTCTACCAGAAGCTGCACCTCATTCAGCACCAGAGG-ACCCACTCGG  299
      ||||| ||||||||||||||||||||||||||||||||| |||||||| |
seq2  ACCTT-TACCAGAAGCTGCACCTCATTCAGCACCAGAGGAACCCACTC-G  286

seq1  GCGAGAAGCCCTACAAGTGTGGCTACTGCGGGAAGTCCTTCTGCCAG-AA  348
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCGAGAAGCCCTACAAGTGTGGCTACTGCGGGAAGTCCTTCTGCCAGAAA  336

seq1  GACGCATCTCACTCAGCACCAGAGGACGCACTCGGGAGAGAGGCCCTATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCATCTCACTCAGCACCAGAGGACGCACTCGGGAGAGAGGCCCTATG  386

seq1  TTTGTCACGACTGTGGCAAGACGTTCTCTCAG-AAGTCAGCACTCAATGA  447
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTGTCACGACTGTGGCAAGACGTTCTCTCAGAAAGTCAGCACTCAATGA  436

seq1  CCACCAGAAGATCCACACGGGCGTCAAACTCTACAAATGCAGCGAGTGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGAAGATCCACACGGGCGTCAAACTCTACAAATGCAGCGAGTGTG  486

seq1  GCAAGTGCTTCTGCCGCAAGTCCACGCTCACAACCCACATGAGGACGCAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTGCTTCTGCCGCAAGTCCACGCTCACAACCCACATGAGGACGCAC  536

seq1  ACGGGCGAGAAGCCGTACGAATGCAACGAGTGCGGCAAGTTCTTCTCCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGCGAGAAGCCGTACGAATGCAACGAGTGCGGCAAGTTCTTCTCCAG  586

seq1  GCTGTCGTACCTCACCGTGCATTACAGAACCCACTCGGGGGAGAAGCCCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCGTACCTCACCGTGCATTACAGAACCCACTCGGGGGAGAAGCCCT  636

seq1  ACGAGTGTGCGGAGTGCGGGAAGTCCTTCTACCTGAACTCAGCCCTTATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGTGTGCGGAGTGCGGGAAGTCCTTCTACCTGAACTCAGCCCTTATG  686

seq1  AGACATCAGAGGGTGCACACGGGGGAGAAGCCTTACGAGTGTAACGAGTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCAGAGGGTGCACACGGGGGAGAAGCCTTACGAGTGTAACGAGTG  736

seq1  TGGGAAATTATTCTCGCAGCTGTCCTACCTCACCGTGCATCACAGAACTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAATTATTCTCGCAGCTGTCCTACCTCACCGTGCATCACAGAACTC  786

seq1  ACTCAGGAGTGAAGCCCTATGAGTGTAGCGAGTGTGGAAAGACC  841
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAGTGAAGCCCTATGAGTGTAGCGAGTGTGGAAAGACC  830

seq1: chr5_143833581_143834021
seq2: B6Ng01-034I10.g_70_510

seq1  GAATTCTATCCCAGGTGGTTCCTGTTAGACCTTCTGTGTTTGCATTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCCAGGTGGTTCCTGTTAGACCTTCTGTGTTTGCATTCCTC  50

seq1  TGTTTTATGCAAGAATCCAGTAACCTCTTTGTACCTTGCTGGTGTGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATGCAAGAATCCAGTAACCTCTTTGTACCTTGCTGGTGTGTCAC  100

seq1  CCAACTTCCTTATTTTCTTCTGTATAAAAAGTTTGATGCTCGATTTGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTCCTTATTTTCTTCTGTATAAAAAGTTTGATGCTCGATTTGACA  150

seq1  AATTACATTCAGATTCTACACAACCTTTCCTGTGTGCATCTGTCTGTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACATTCAGATTCTACACAACCTTTCCTGTGTGCATCTGTCTGTCAT  200

seq1  TCCATCCGACGCTTTGCCCACCTGTGACTAGAGACCCGTTCCACGCAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCGACGCTTTGCCCACCTGTGACTAGAGACCCGTTCCACGCAGAC  250

seq1  AAAGGGGCCCAGAGGGTCTGCGGCAGGATCACAAGAAGCACTAACTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGCCCAGAGGGTCTGCGGCAGGATCACAAGAAGCACTAACTATTC  300

seq1  AGACACCCAAGGTCACTATTTGGCCTATATGCCCATGGCTCAAAAATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCCAAGGTCACTATTTGGCCTATATGCCCATGGCTCAAAAATCTT  350

seq1  TCAAATACATCATTACTAAGAATGTTATACAGAAGATGATGTTCCTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATACATCATTACTAAGAATGTTATACAGAAGATGATGTTCCTAAAA  400

seq1  ACCAAAAAGAAAGGAAAAAAAAAGGGGGGGGGGTGGGGAAG  441
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAAGAAAGGAAAAAAAAAGGGGGGGGGGTGGGGAAG  441