BAC Information

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BAC

Clone NameB6Ng01-035P14
Chromosome5 (Build37)
Map Location 89,539,210 - 89,539,906
singlet/doubletsinglet
Overlap geneSlc4a4
Upstream geneLOC100039941, LOC630942, EG665615, Muc10, Amtn, LOC100039963, EG665631, Ambn, Enam, Igj, Crlz1, Rufy3, Grsf1, Mobkl1a, Dck, Mkrn1-ps1
Downstream geneGc, LOC622870, Npffr2, LOC631105, Adamts3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035P14.bB6Ng01-035P14.g
ACCDH864298DH864299
length1,120698
definitionDH864298|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P14, 5' end.DH864299|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgtagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgcgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgatttccgccagaagttctt
ttatccttgagaagactatttgctatctaagtttttttgttattccagaa
caaattttgcaaattgctcccttccaattcgttgaaaaatttgagttgga
attttgatggggattgcattgaatcctgtagattgcttttggcaaggata
gccatttgtaacaatgtttatcctgccaatccatgagcatgggagatctt
tccatcttctgagaatcttccttaatttctttttttcgaaaattgaagtt
ttttcctaccaaatctttcccttccttagtagagtccgccgaaaaatttc
tatattgtgactattgagaagggtgttgtttccctatttcttctcagctt
gtttattcttgaaaagaaaggctatgaccttgtgagttatttatatcagc
tacttcactgagcggtttacagtttaaggagttcctcgggtgaaatatta
gggtcatctaaattaactat
gaattcaaaccagatgattttattgggagactttcaggcagatttatcgg
ccttggattttgttcttattctcgtgatctgctgttgacttttgttgtgt
ctccctctttaatctgtacaattttctcttagtattttatgattgttcaa
agtttattgtgtaagcccagaattggtggtgtttgtattatagtcgttgt
attttcctgtatgggctattgttccatcccttacaaaagtaacgaatgaa
tcagtctctgataagccaatgttgtggggtgggtttttgaactctcacac
agtctccttccccgaaccctgttactgggtacactttctgtgctttgtga
cctctcactgtacaatgtgactttcatgatatttatgtgtcttcttttgt
gacagctatttctgaatttgcttctccgggctgcactgtgaagctcgggg
cttgtctgttcttcacagtgcccctagctagaccttgaacactgtaggcc
cctatacattttgtcaaagagcgtgggattagatgaaagaggaaaatctg
tctatccaaagcaacagtctgtgatcagatctcataccataatggacctc
ttcttccggcgggagatgaagcattctggggcatacgggcttaattaaag
gctttggagaatggaccaagtgcaaatgcttacatatcacttttattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_89539210_89539906
seq2: B6Ng01-035P14.g_69_766

seq1  GAATTCAAACCAGATGATTTTATTGGGAGACTTTCAGGCAGATTTATCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCAGATGATTTTATTGGGAGACTTTCAGGCAGATTTATCGG  50

seq1  CCTTGGATTTTGTTCTTATTCTCGTGATCTGCTGTTGACTTTTGTTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGATTTTGTTCTTATTCTCGTGATCTGCTGTTGACTTTTGTTGTGT  100

seq1  CTCCCTCTTTAATCTGTACAATTTTCTCTTAGTATTTTATGATTGTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTTTAATCTGTACAATTTTCTCTTAGTATTTTATGATTGTTCAA  150

seq1  AGTTTATTGTGTAAGCCCAGAATTGGTGGTGTTTGTATTATAGTCGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATTGTGTAAGCCCAGAATTGGTGGTGTTTGTATTATAGTCGTTGT  200

seq1  ATTTTCCTGTATGGGCTATTGTTCCATCCCTTACAAAAGTAACGAATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTGTATGGGCTATTGTTCCATCCCTTACAAAAGTAACGAATGAA  250

seq1  TCAGTCTCTGATAAGCCAATGTTGTGGGGTGGGTTTTTGAACTCTCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTCTGATAAGCCAATGTTGTGGGGTGGGTTTTTGAACTCTCACAC  300

seq1  AGTCTCCTTCCCCGAACCCTGTTACTGGGTACACTTTCTGTGCTTTGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCTTCCCCGAACCCTGTTACTGGGTACACTTTCTGTGCTTTGTGA  350

seq1  CCTCTCACTGTACAATGTGACTTTCATGATATTTATGTGTCTTCTTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCACTGTACAATGTGACTTTCATGATATTTATGTGTCTTCTTTTGT  400

seq1  GACAGCTATTTCTGAATTTGCTTCTCCGGGCTGCACTGTGAAGCTCGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTATTTCTGAATTTGCTTCTCCGGGCTGCACTGTGAAGCTCGGGG  450

seq1  CTTGTCTGTTCTTCACAGTGCCCCTAGCTAGACCTTGAACACTGTAGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTGTTCTTCACAGTGCCCCTAGCTAGACCTTGAACACTGTAGGCC  500

seq1  CCTATACATTTTGTCAAAGAGCGTGGGATTAGATGAAAGAGGAAAATCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATACATTTTGTCAAAGAGCGTGGGATTAGATGAAAGAGGAAAATCTG  550

seq1  TCTATCCAAAGCAACAGTCTGTGATCAGATCTCATACCATAATGGACCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCCAAAGCAACAGTCTGTGATCAGATCTCATACCATAATGGACCTC  600

seq1  TTCTTCCGGCGGGAGATGAAGCATTCTGGGGCATACGGGCTT-ATTAAAG  649
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCTTCCGGCGGGAGATGAAGCATTCTGGGGCATACGGGCTTAATTAAAG  650

seq1  GCTTT-GAGAATGGACCAAGTGCAGATGCTTACATATTCAGCTTTATTG  697
      ||||| |||||||||||||||||| ||||||||||| |||  |||||||
seq2  GCTTTGGAGAATGGACCAAGTGCAAATGCTTACATA-TCACTTTTATTG  698