BAC Information

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BAC

Clone NameB6Ng01-036M09
Chromosome5 (Build37)
Map Location 78,367,673 - 78,368,150
singlet/doubletsinglet
Overlap genenone
Upstream genePpat, LOC664998, Paics, Srp72, Arl9, 1700023E05Rik, Hod, Spink2, Rest, 2610024G14Rik, Polr2b, Igfbp7, Pea15b, LOC669227
Downstream geneLOC100039398, Mthfr-ps1, EG384187
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036M09.bB6Ng01-036M09.g
ACCDH864840DH864841
length4721,131
definitionDH864840|Mus musculus domesticus DNA, BAC clone: B6Ng01-036M09, 5' end.DH864841|Mus musculus domesticus DNA, BAC clone: B6Ng01-036M09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tccctttccaatttgtatccctttgacctccttttgttgtctaattgctc
tggaaaaatgtgtcgcacaggttgtcctcacactcatgatcctccttcct
ctgctacccccagcaaatcctaccggtgtgtgccaccacaactggccctt
tgtttctttagttatatttgttatatatgatatatatggaaagtgttata
tgtgcctgtgtgcacatatgcatgtgtgcacaggagattgaagatatata
tgcatgtatacacacgaatatatgtaaataaggtcagatgagtcagtttt
ttgttgtttatatgcataggattttcaggtggcattctgtactggatact
cctctcttctgggtctttccatcattttcttgccattttatttctgattt
tctctgtttatttacctatttgtgtatctatctgtctctctctctctctc
tctctctctctctctctctctc
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaagtgacagca
gatgctggcgtggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaggcttgtacaaccactctggaagtcagtctggcagttcctcag
aaaattggacatagtactaccggaggatccagcaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccataagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccaaaacct
aggatacccaagatataagatacaatttcctaaacacatgaaactcaaga
aaaatgaagactgaagtatggacactatgcccctccttagaagtgggaac
aaaacacccatggaaaggagttaaagagacaaagtttggagctgagacga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
gaccagatgtagctttctcttgtgagactatgccgggtcctaacaacaca
gagtgatgctcacagtcagctatgatgatcacaggctccaatggaggagc
tagagaagaaccaagagctaagggatctgcaccctataggtgaacacatt
atgactacagacctggagtctttgactctagctgcatatgtatcaaagat
gctagtcggcatactgaagaagcattggacatgcaacttatgcccatact
gggactcaggcaaaagggatgtgtgtaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_78367673_78368150
seq2: B6Ng01-036M09.b_48_525

seq1  GAATTCTCCCTTTCCAATTTGTATCCCTTTGACCTCCTTTTGTTGTCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTTTCCAATTTGTATCCCTTTGACCTCCTTTTGTTGTCTAA  50

seq1  TTGCTCTGGAAAAATGTGTCGCACAGGTTGTCCTCACACTCATGATCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTGGAAAAATGTGTCGCACAGGTTGTCCTCACACTCATGATCCTC  100

seq1  CTTCCTCTGCTACCCCCAGCAAATCCTACCGGTGTGTGCCACCACAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTGCTACCCCCAGCAAATCCTACCGGTGTGTGCCACCACAACTG  150

seq1  GCCCTTTGTTTCTTTAGTTATATTTGTTATATATGATATATATGGAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTGTTTCTTTAGTTATATTTGTTATATATGATATATATGGAAAGT  200

seq1  GTTATATGTGCCTGTGTGCACATATGCATGTGTGCACAGGAGATTGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATGTGCCTGTGTGCACATATGCATGTGTGCACAGGAGATTGAAGA  250

seq1  TATATATGCATGTATACACACGAATATATGTAAATAAGGTCAGATGAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGCATGTATACACACGAATATATGTAAATAAGGTCAGATGAGTC  300

seq1  AGTTTTTTGTTGTTTATATGCATAGGATTTTCAGGTGGCATTCTGTACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTTGTTGTTTATATGCATAGGATTTTCAGGTGGCATTCTGTACTG  350

seq1  GATACTCCTCTCTTCTGGGTCTTTCCATCATTTTCTTGCCATTTTATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCCTCTCTTCTGGGTCTTTCCATCATTTTCTTGCCATTTTATTTC  400

seq1  TGATTTTCTCTGTTTATTTACCTATTTGTGTATCTATCTGTCTCTCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTCTCTGTTTATTTACCTATTTGTGTATCTATCTGTCTCTCTCTC  450

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTC  478
      ||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTC  478