BAC Information

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BAC

Clone NameB6Ng01-036N02
Chromosome10 (Build37)5 (Build37)
Map Location 104,053,903 - 104,054,36318,084,512 - 18,084,575
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036N02.bB6Ng01-036N02.g
ACCDH864874DH864875
length915595
definitionDH864874|Mus musculus domesticus DNA, BAC clone: B6Ng01-036N02, 5' end.DH864875|Mus musculus domesticus DNA, BAC clone: B6Ng01-036N02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(18,084,512 - 18,084,575)
sequence
gaattctcaactgaggaataccgaatgtttgagaagcacctaaaagaatg
ttcaacattctcaatcatcagggaaatgcaaatcaaaacaaccctgagat
tctgcctcacaccagtcagaatggctaagatcaaaaattcaggtgatagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctgaacatcagtctggcagttcctca
gaaaattggactaattctacctagtggaagatccagcgatacctcttctg
ggcatatacccagaagaagttccaactggtaataacaaatgccccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gttactcaacagaagaatggacacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaacaattaatttatgaaattcttggaaaa
atgaatgtatctggaggatatcatacttagtgaggtaacccaatcacaaa
agaagtcattagatatgcatgcattgataagtggatattagcccagaaac
atagaacacccaagatacaatttgcaaaacacatgaaaatcaagaagagg
taagaccaatgggtggatacttcattcctccttaggatagggaacaaaat
acccatgaaaggagttacagagacaaagtttggagctaagacaaaggatg
tactatccagagactaccccacccgtggatccatcccaaaattagccacc
aaacccagacactattgcatatgccagcaagactttcctgaaggaccctg
gtttacctgtctcatatgaggctatgccagtattggcaaatacagaagtg
gatgctcacatcatc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctgggagagcatcatcctgagtgaggtaacacaatcacaa
aggaactcacacaatatgtacttcactgataagtggatactagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-036N02.b_42_512 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||||||||||||||||||||||||||||| 
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTCTGTG  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || |||| |||||||||   ||||| |||||||||||||| |||||||||
seq2  TCCATTCTTCTGTTGAGTAACATCTAGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| ||||||| |||| ||   || ||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGGGCATTTG---TTATTACCAGT  147

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCC-  189
      |||  | |||||||| |||||||||||||||||||| |||||||| ||| 
seq2  TGGAACTTCTTCTGGGTATATGCCCAGAAGAGGTATCGCTGGATCTTCCA  197

seq1  ---GGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCA  236
         ||||| | || |||||||||||||| |||| ||||||| ||| | ||
seq2  CTAGGTAGAATTA-GTCCAATTTTCTGAGGAACTGCCAGACTGATGTTCA  246

seq1  GAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTC  286
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTC  296

seq1  TTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTA  336
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTCTCCACATCCTCGCCAGCATCTGCTATCACCTGAATTTTTGATCTTA  346

seq1  GCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCAT  386
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  GCCATTCTGACTGGTGTGAGGCAGAATCTCAGGGTTGTTTTGATTTGCAT  396

seq1  TTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCA  436
      ||||||||||||| || |||||||||||| ||| |||||||||||   ||
seq2  TTCCCTGATGATTGAGAATGTTGAACATTCTTTTAGGTGCTTCTCAAACA  446

seq1  TTCGGTATTCCTCAGGTGAGAATTC  461
      ||||||||||||||| |||||||||
seq2  TTCGGTATTCCTCAGTTGAGAATTC  471

seq1: chr5_18084512_18084575
seq2: B6Ng01-036N02.g_383_446 (reverse)

seq1  TTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCC  50

seq1  TTCTTACCAGTTGG  64
      ||||||||||||||
seq2  TTCTTACCAGTTGG  64