BAC Information

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BAC

Clone NameB6Ng01-043L18
Chromosome5 (Build37)
Map Location 87,357,883 - 87,358,576
singlet/doubletsinglet
Overlap genenone
Upstream geneCenpc1, LOC100039521, AI586015, Ube1l2, Gnrhr, Tmprss11c, Tmprss11d, Tmprss11a, 9930032O22Rik, Tmprss11f, Tmprss11b, Tmprss11e, A730098D12Rik, LOC622056, Ugt2b34, Ugt2b1
Downstream geneLOC665424, LOC545767, Ugt2b35, Ugt2b36, LOC665440, Ugt2b5, LOC435848, Ugt2b37, LOC665468, Ugt2a3, LOC665476, LOC665483, LOC665494, LOC100039818, Ugt2b38, Ugt2a2, Ugt2a1, Sult1b1, Sult1d1, Sult1e1, Csn1s1, Csn2, Csn1s2a, Csn1s2b, 4930432K09Rik, EG654494, Odam, BC037156, Csn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043L18.bB6Ng01-043L18.g
ACCDH869707DH869708
length1,0561,020
definitionDH869707|Mus musculus domesticus DNA, BAC clone: B6Ng01-043L18, 5' end.DH869708|Mus musculus domesticus DNA, BAC clone: B6Ng01-043L18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttgaaaaaaa
tatggaatgcttctgaatttgtgtgtcatccttgtgcaggggctatgcta
atcttctctgtatcgttccaattttagtatatgtgctgctgaagcaagca
ccaattgattcacttcttacaagcaagtattgtgcctttcataaaaattg
aatattttctttatttatgtttcaaatgttttctgcttttcaggtctccc
ctctggagaccccatataccatcccctctccctctgcctatatgatggtg
ctccccgacccacccacccactcacattttttctgccccagttctggcat
ttcggtacactggggcattgaacaccctcagtcacaatggcctctcctcc
tgaccatgaccaacaaggctatcctctttaacatatgcggccattgccat
gggttcctccatgtgtatcttttggtttgtggtccagtgcacaggagcta
ctgggatctggcctgttgacactgctgccctctccatggggcttcaaccc
ccctaagcttcagtagtcctttctccagctccttcatcttgtacccccag
cactcattctaatggttggttgtgagcatccacctctgtatttttcaggc
tctggcagaacctctcaggagacagccatatcagacttccatcagcaagc
acttccaggtacccacaatagtgtctgactttggtggctttttatcctca
tgtgggaagtctctggatggtcttttcttaaatctctgctccacactttt
tctccatattttctcctgtgagtattttattcaaccttctaagaagcact
gaagcatccatattttggtcttctttcttcttaggcttcttatggtctga
gaattaaatcctctgtactctgtacttttgggctaatgtccacttattaa
cgaatacatatcgtgcatgttcttttgtgactgagttacctcatccagca
tgaatattttcaagtttcatccattttgcctgcaaatttcatgaagtact
ggtttt
gaattctgatggagattgcattgaatctgtagattgcttttggtaagatg
gcctttttaactatgttaatcctaccagttcatgagcatgggagatcttt
acattttctgaggtctttaatttcttttttgagagacttgaagttctggt
tatacaggttatacaggtctctcacttatttggttagagttaccccaaaa
tattatatatttctgactattgtgaagtgtgtcatttttttttattttct
ttctccactccatttatcatttgtagaaatgaaaggatactgatttgttt
gagttcattttaaatccagccacttagcttaagttttcagatttagagtt
tccctggtagaatttttggagtcacttatgcatactataatatcatctac
aaataatgatacgttaccttcttctttttcaaattgtacctccttgatct
cttagctagagttaggaagagccttgtcttgtccatgattatagtgggat
tgctttaagtatctctccacttttaatttgatattgcctgttgtttgctg
tatattacttttattatgtttaggtatggaccttgaattccttatctttc
caatactttaacatgaaggagtgttgtattttgtcaaaggcgtttttagc
atctaatgagatgatcatgtgattttttttctttgagtttacctatatag
tgggttacattaaaatatttgcatatatttgaaccaacattgcatccatg
agatgaagtctacttgatcactgtgaatgatggttttgatacattccctt
ggttcagtttgctaaaattttattgggcatttttgcattgatattaataa
ggaaaattggttggaagttttctttctttgttgtgtctttgtgtggttag
atgtcagcgtcaatatggtatttatttgtttcttttaagtgcttcaacct
attacctgtgtttcctgttttgttgtttgtttttgtttgtttttgttttt
taggggggtatttaaatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_87357883_87358576
seq2: B6Ng01-043L18.b_44_737

seq1  GAATTCCTGATCTTTCCAAGACTTTTATCATGAATGGGTGTTGAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCTTTCCAAGACTTTTATCATGAATGGGTGTTGAAAAAAA  50

seq1  TATGGAATGCTTCTGAATTTGTGTGTCATCCTTGTGCAGGGGCTATGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAATGCTTCTGAATTTGTGTGTCATCCTTGTGCAGGGGCTATGCTA  100

seq1  ATCTTCTCTGTATCGTTCCAATTTTAGTATATGTGCTGCTGAAGCAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTCTGTATCGTTCCAATTTTAGTATATGTGCTGCTGAAGCAAGCA  150

seq1  CCAATTGATTCACTTCTTACAAGCAAGTATTGTGCCTTTCATAAAAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTGATTCACTTCTTACAAGCAAGTATTGTGCCTTTCATAAAAATTG  200

seq1  AATATTTTCTTTATTTATGTTTCAAATGTTTTCTGCTTTTCAGGTCTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTCTTTATTTATGTTTCAAATGTTTTCTGCTTTTCAGGTCTCCC  250

seq1  CTCTGGAGACCCCATATACCATCCCCTCTCCCTCTGCCTATATGATGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAGACCCCATATACCATCCCCTCTCCCTCTGCCTATATGATGGTG  300

seq1  CTCCCCGACCCACCCACCCACTCACATTTTTTCTGCCCCAGTTCTGGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCGACCCACCCACCCACTCACATTTTTTCTGCCCCAGTTCTGGCAT  350

seq1  TTCGGTACACTGGGGCATTGAACACCCTCAGTCACAATGGCCTCTCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGTACACTGGGGCATTGAACACCCTCAGTCACAATGGCCTCTCCTCC  400

seq1  TGACCATGACCAACAAGGCTATCCTCTTTAACATATGCGGCCATTGCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATGACCAACAAGGCTATCCTCTTTAACATATGCGGCCATTGCCAT  450

seq1  GGGTTCCTCCATGTGTATCTTTTGGTTTGTGGTCCAGTGCACAGGAGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCCTCCATGTGTATCTTTTGGTTTGTGGTCCAGTGCACAGGAGCTA  500

seq1  CTGGGATCTGGCCTGTTGACACTGCTGCCCTCTCCATGGGGCTTCAACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATCTGGCCTGTTGACACTGCTGCCCTCTCCATGGGGCTTCAACCC  550

seq1  CCCTAAGCTTCAGTAGTCCTTTCTCCAGCTCCTTCATCTTGTACCCCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGCTTCAGTAGTCCTTTCTCCAGCTCCTTCATCTTGTACCCCCAG  600

seq1  CACTCATTCTAATGGTTGGTTGTGAGCATCCACCTCTGTATTTTTCAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATTCTAATGGTTGGTTGTGAGCATCCACCTCTGTATTTTTCAGGC  650

seq1  TCTGGCAGAACCTCTCAGGAGACAGCCATATCAGACTTCCATCA  694
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAGAACCTCTCAGGAGACAGCCATATCAGACTTCCATCA  694