BAC Information

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BAC

Clone NameB6Ng01-051I10
Chromosome5 (Build37)
Map Location 83,187,210 - 83,188,220
singlet/doubletsinglet
Overlap genenone
Upstream geneLphn3, EG433912
Downstream geneLOC100039434, Srd5a2l2, LOC100039608
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051I10.bB6Ng01-051I10.g
ACCDH875137DH875138
length8491,010
definitionDH875137|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I10, 5' end.DH875138|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcttctttttttttttcctttaatgtgtatgaagtggctgtcc
ttaaatttttttgataactattgtttgaaagtcgattttatctgatatta
gaatggctaccccagcttcttttttggtatcattttcttggaaatttgtt
ttccaaccctttactctgaggtagtggttgtctttgacactgaggtgcat
tttctttatgcagcaaaatgctgggtcctttttacatatccatactgttg
atcgatgtctttttattgggaattgagtccatcgatgttaagagatatta
agaaataatgattgttgcttcctgttattttgatgttatttttccatttg
tgtggttatcttcttttgttttgttgaaagaatattactttcttgcttta
tctagggtatagtttccctcatgttggcagtttccatctattatacttta
tagagctgaaattgtggaaagatactgtgtagatttggttttgtcgtgga
atatcttggtttctccatatatggcaattgagaattttgttgggtatagt
agtctgggctggaatttgtgttctcttacggtctgtaagagatttactca
ggatctgctaactttcataatctctgttgaaaagtctggtatattcttga
taggactgccttttacatattacttttgcttttctcctttattgctttta
atatttctttctttgtttagtgtacttggtgttttatttcttatgtgatg
ggagggaatttctttctggtcctgtcttttggagttctggaggcttcttg
tatgtcattggcatctcttacttttaggcatggaatgttttcttcttaa

gaattctttcagcaatcatggacatgtacctttgaatgtacttatgtgga
tgttttcagaaaggatttaatgaggatggaaggctcgcaatgaatgtagt
cagaaccatgtcatatactgaggtcttaatatggagcggagtgtttttct
gctttcagagtactaatacatgtgagtaacgtaactggaagtcttattct
cctgctatcaagacctttcttccatgatgcaccgtttcttcaaactatga
gcaaaataaatccttccttctttgtgttcctcttataaagtatttaatga
catcatacaaaatataactaaaaaaatgtgcaaaagtatgaggccattgc
tgtgataaaccctgtagttttaggtttggaaaaatgacttacaggtgaaa
ggtaatatatcaaggtgcagaaatcttttgcaaatttagctttcaatcct
tgtttaaatataatatttatacatctacttaaataacttatttttactgg
gctataaaacaagtctaaaatgtttacacacatgctcacatgtatgttct
gataaccataaggaactgaataaaatgaatgcaggttaaacccaatatcc
tgattttcaaagtttagaaaatgtattttgccataatttcacattatatt
atcatagattctttactaaaattgcttgtacagttagctgactttgcccc
ataactctgcagttcatgcagtttaattattttattccaattatatgtgg
atcctttcatcataattagaacatgtaattattgatcagtgtgctttgta
agatacacttcattttcctacttatttgaaggtatttcatgaggcttgat
ttttgtacttaatataaaaagctttattgaaaagaaagaaaatgtttaga
gtcaaggatgaaggtagggagaaacatatcatccattctcttgagataca
ttactgttttggttatgtaagaatgggcagtatgctatgtttcatacaaa
cagaacattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_83187210_83188220
seq2: B6Ng01-051I10.g_66_1075 (reverse)

seq1  AAATGGTCTGTTTGTATGAAACATAGCATACTGCCCATTCTTACATAACC  50
      ||||| |||||||||||||||||||||||||||||||||||||||||| |
seq2  AAATGTTCTGTTTGTATGAAACATAGCATACTGCCCATTCTTACATAA-C  49

seq1  CAAAACAGTAATGTA-CTCAAGAGAATGGATGATATGTTTCTCCCTAACC  99
      ||||||||||||||| |||||||||||||||||||||||||||||| |||
seq2  CAAAACAGTAATGTATCTCAAGAGAATGGATGATATGTTTCTCCCT-ACC  98

seq1  TTCATCC-TGACTCTATACATTTTCTTTCTTTTCAATAAAGCTTTTTAAT  148
      ||||||| |||||||| |||||||||||||||||||||||||||||| ||
seq2  TTCATCCTTGACTCTAAACATTTTCTTTCTTTTCAATAAAGCTTTTT-AT  147

seq1  ATTAAGTACAAAAATCAAGCCTCATGAAATACCTTCAAATAAGTAGGAAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTACAAAAATCAAGCCTCATGAAATACCTTCAAATAAGTAGGAAA  197

seq1  ATGAAGTGTATCTTACAAAGCACACTGATCAATAATTACATGTTCTAATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTGTATCTTACAAAGCACACTGATCAATAATTACATGTTCTAATT  247

seq1  ATGATGAAAGGATCCACATATAATTGGAATAAAATAATTAAACTGCATGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAAAGGATCCACATATAATTGGAATAAAATAATTAAACTGCATGA  297

seq1  ACTGCAGAGTTATGGGGCAAAGTCAGCTAACTGTACAAGCAATTTTAGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGAGTTATGGGGCAAAGTCAGCTAACTGTACAAGCAATTTTAGTA  347

seq1  AAGAATCTATGATAATATAATGTGAAATTATGGCAAAATACATTTTCTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCTATGATAATATAATGTGAAATTATGGCAAAATACATTTTCTAA  397

seq1  ACTTTGAAAATCAGGATATTGGGTTTAACCTGCATTCATTTTATTCAGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAAAATCAGGATATTGGGTTTAACCTGCATTCATTTTATTCAGTT  447

seq1  CCTTATGGTTATCAGAACATACATGTGAGCATGTGTGTAAACATTTTAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGGTTATCAGAACATACATGTGAGCATGTGTGTAAACATTTTAGA  497

seq1  CTTGTTTTATAGCCCAGTAAAAATAAGTTATTTAAGTAGATGTATAAATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTATAGCCCAGTAAAAATAAGTTATTTAAGTAGATGTATAAATA  547

seq1  TTATATTTAAACAAGGATTGAAAGCTAAATTTGCAAAAGATTTCTGCACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTAAACAAGGATTGAAAGCTAAATTTGCAAAAGATTTCTGCACC  597

seq1  TTGATATATTACCTTTCACCTGTAAGTCATTTTTCCAAACCTAAAACTAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATATTACCTTTCACCTGTAAGTCATTTTTCCAAACCTAAAACTAC  647

seq1  AGGGTTTATCACAGCAATGGCCTCATACTTTTGCACATTTTTTTAGTTAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTATCACAGCAATGGCCTCATACTTTTGCACATTTTTTTAGTTAT  697

seq1  ATTTTGTATGATGTCATTAAATACTTTATAAGAGGAACACAAAGAAGGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTATGATGTCATTAAATACTTTATAAGAGGAACACAAAGAAGGAA  747

seq1  GGATTTATTTTGCTCATAGTTTGAAGAAACGGTGCATCATGGAAGAAAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTATTTTGCTCATAGTTTGAAGAAACGGTGCATCATGGAAGAAAGG  797

seq1  TCTTGATAGCAGGAGAATAAGACTTCCAGTTACGTTACTCACATGTATTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATAGCAGGAGAATAAGACTTCCAGTTACGTTACTCACATGTATTA  847

seq1  GTACTCTGAAAGCAGAAAAACACTCCGCTCCATATTAAGACCTCAGTATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTGAAAGCAGAAAAACACTCCGCTCCATATTAAGACCTCAGTATA  897

seq1  TGACATGGTTCTGACTACATTCATTGCGAGCCTTCCATCCTCATTAAATC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGGTTCTGACTACATTCATTGCGAGCCTTCCATCCTCATTAAATC  947

seq1  CTTTCTGAAAACATCCACATAAGTACATTCAAAGGTACATGTCCATGATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGAAAACATCCACATAAGTACATTCAAAGGTACATGTCCATGATT  997

seq1  GCTGAAAGAATTC  1011
      |||||||||||||
seq2  GCTGAAAGAATTC  1010


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