BAC Information

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BAC

Clone NameB6Ng01-051I23
Chromosome5 (Build37)
Map Location 17,500,415 - 17,501,438
singlet/doubletsinglet
Overlap geneGnat3
Upstream geneLOC626390, LOC668142, LOC100041749, LOC100041832, Speer4f, EG630927, Sema3c, Cd36
Downstream geneGnai1, LOC100041818, LOC668167
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051I23.bB6Ng01-051I23.g
ACCDH875163DH875164
length1,1551,009
definitionDH875163|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I23, 5' end.DH875164|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcataggctcccaa
tggaggagctagagaaagtagccaaggagctaaaggatctgcaaccctat
aggtggaacaacattatgagctaaccagtaccccggagctcttgactcct
agctgcataatattcaaagatggctagtcgcatcactggaagagagggcc
cattgggactgcaactttatattgctcgtacagggaataccaggccaaaa
ttcag
gaattcattctgaaccatgcaatcacatttccaaataagagagaaaaaga
tatatcagatcccggaatagaagacttgcatgtctgtttgagaagtaatt
aaaaatgtcaaatgctgttgctactaaactttcagtctttgaatattgac
agctgttgagaattcctgatctgttgtaggacacaggtgatccacatata
ttgcttacaggaattcaattgcagaacattttgggcaatttttttctaat
tatcatcatcataactcccatcctgattattatacttgtgtgtgtgatgt
gtatgatgtgtgtgtgttcaggtatgccatggtgtacatgtggaagtcaa
agcataattccttggagctggttctcttttctctttatatgtatttacta
catcacccggggccattaggcttctcgtcagtaggcttcctatttctttg
taacaactagagaatgtcacattaaaaatgcaactacctgctacattttt
ttcttcctctaagcatttgattatttcttctcatctactacccctttaag
ttcctctatgtaaatcacaatagcctgtaacaacatgaccagaagaccta
cgtttacatccgtagacagaataccacatttagctttaaattcatgtttg
caattgcttgcatgtgtaaacgtcttatagaatgaggatgcacaagactt
tctaagacacagtgagccgtcttaaccactcttccagtgaaaaggattta
cagaaactcacatgcagctgtgctaacccgcttaagtgccaaacacttta
taaagatcaatagccagccccctttctgagtacagtttttcatttcaact
acagatgactaacatagttactgtatctcagagcacccaaatgtttgcca
cataacatagaatattttaaaggatctctgatgaaagatttctgtgtaaa
ctttattactttgtatctattatgaaaataaaggaaagatacttactgga
ccttatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_17500415_17501438
seq2: B6Ng01-051I23.g_68_1076 (reverse)

seq1  AAAATAAGGTCCAGGTAAGTATCTTCTCCTTTTATTTTTCAATAATAGAT  50
      ||||||||||||| ||||||||||| ||| ||||||||   |||||||||
seq2  AAAATAAGGTCCA-GTAAGTATCTT-TCC-TTTATTTT--CATAATAGAT  45

seq1  ACAAAGTAATTAAAGTTTTTACACAGAAATTCTCTCATCAGAGATCCTTT  100
      ||||||||| |||||  |||||||||||| ||| ||||||||||||||||
seq2  ACAAAGTAA-TAAAG--TTTACACAGAAA-TCTTTCATCAGAGATCCTTT  91

seq1  AAAATATTCTATGTTTATGTGGCAAACATTTGGGTTGCTTCTGGAGATAC  150
      ||||||||||||| |||||||||||||||||||| ||| ||| |||||||
seq2  AAAATATTCTATG-TTATGTGGCAAACATTTGGG-TGC-TCT-GAGATAC  137

seq1  AGTAACTAATGTTAGTCATCTGTAGTTGAAATGGAAAAACTGTACTCAGA  200
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  AGTAACT-ATGTTAGTCATCTGTAGTTGAAAT-GAAAAACTGTACTCAGA  185

seq1  AAGGGGGGCTGGCTATTGATCTTTATAAAGTGTTTGGCACTTAAGCGGGT  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-GGGGGCTGGCTATTGATCTTTATAAAGTGTTTGGCACTTAAGCGGGT  234

seq1  TAGCACAGCTGCATGTGAGTTTCTGTAAATCCTTTTCACTGGAAGAGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAGCTGCATGTGAGTTTCTGTAAATCCTTTTCACTGGAAGAGTGG  284

seq1  TTAAGACGGCTCACTGTGTCTTAG-AAGTCTTGTGCATCCTCATTCTATA  349
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTAAGACGGCTCACTGTGTCTTAGAAAGTCTTGTGCATCCTCATTCTATA  334

seq1  AGACGTTTACACATGCAAGCAATTGCAAACATGAATTTAAAGCTAAATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTTTACACATGCAAGCAATTGCAAACATGAATTTAAAGCTAAATGT  384

seq1  GGTATTCTGTCTACGGATGTAAACGTAGGTCTTCTGGTCATGTTGTTACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCTGTCTACGGATGTAAACGTAGGTCTTCTGGTCATGTTGTTACA  434

seq1  GGCTATTGTGATTTACATAGAGGAACTTAAAGGGGTAGTAGATGAGAAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTGTGATTTACATAGAGGAACTTAAAGGGGTAGTAGATGAGAAGA  484

seq1  AATAATCAAATGCTTAGAGGAAGAAAAAAATGTAGCAGGTAGTTGCATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCAAATGCTTAGAGGAAGAAAAAAATGTAGCAGGTAGTTGCATTT  534

seq1  TTAATGTGACATTCTCTAGTTGTTACAAAGAAATAGGAAGCCTACTGACG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTGACATTCTCTAGTTGTTACAAAGAAATAGGAAGCCTACTGACG  584

seq1  AGAAGCCTAATGGCCCCGGGTGATGTAGTAAATACATATAAAGAGAAAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCTAATGGCCCCGGGTGATGTAGTAAATACATATAAAGAGAAAAG  634

seq1  AGAACCAGCTCCAAGGAATTATGCTTTGACTTCCACATGTACACCATGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCAGCTCCAAGGAATTATGCTTTGACTTCCACATGTACACCATGGC  684

seq1  ATACCTGAACACACACACATCATACACATCACACACACAAGTATAATAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGAACACACACACATCATACACATCACACACACAAGTATAATAAT  734

seq1  CAGGATGGGAGTTATGATGATGATAATTAGAAAAAAATTGCCCAAAATGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGGGAGTTATGATGATGATAATTAGAAAAAAATTGCCCAAAATGT  784

seq1  TCTGCAATTGAATTCCTGTAAGCAATATATGTGGATCACCTGTGTCCTAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAATTGAATTCCTGTAAGCAATATATGTGGATCACCTGTGTCCTAC  834

seq1  AACAGATCAGGAATTCTCAACAGCTGTCAATATTCAAAGACTGAAAGTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATCAGGAATTCTCAACAGCTGTCAATATTCAAAGACTGAAAGTTT  884

seq1  AGTAGCAACAGCATTTGACATTTTTAATTACTTCTCAAACAGACATGCAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCAACAGCATTTGACATTTTTAATTACTTCTCAAACAGACATGCAA  934

seq1  GTCTTCTATTCCGGGATCTGATATATCTTTTTCTCTCTTATTTGGAAATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTATTCCGGGATCTGATATATCTTTTTCTCTCTTATTTGGAAATG  984

seq1  TGATTGCATGGTTCAGAATGAATTC  1024
      |||||||||||||||||||||||||
seq2  TGATTGCATGGTTCAGAATGAATTC  1009