BAC Information

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BAC

Clone NameB6Ng01-054A23
Chromosome5 (Build37)
Map Location 61,516,280 - 61,517,235
singlet/doubletsinglet
Overlap geneLOC666597
Upstream geneCbfa2t2-ps1, LOC100041498
Downstream geneEG666610, LOC100041524, G6pd2, LOC100041543
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054A23.bB6Ng01-054A23.g
ACCDH876919DH876920
length1,1941,018
definitionDH876919|Mus musculus domesticus DNA, BAC clone: B6Ng01-054A23, 5' end.DH876920|Mus musculus domesticus DNA, BAC clone: B6Ng01-054A23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcattctgagccccattttttaagggggttatttgattt
tctgaggtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccagtctgttggtggtctt
tttgtcttatagacagtgtcttttgccttgcagaaactttggagtttcat
taggtcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacatgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttggctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ccacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctcggttttttgttattccagatga
atttgcaaattgctccttctaattcgttgaagaattgagttggaatttta
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttggtcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcaggacttgaagtttttatcataca
gatctttcacttccttcgttagagtcacgccgagatattttatattattt
tgtggctattgagaacggtgttgtttccctaatttcttttctcagcctgt
ttattctttggtgtagagaaaggccattgacttgtttgagttaatttata
attcagctactcaccgaagctgttttttcagttaggaatttcttgttgaa
ttttaaggtcactaatatatacatcatatcattctcgcaaggaatttgac
tcctttcaatggatccctgattccctttgtgtcgcaatgtctgc
gaattccaggacagccagggctatacagagaaaccctgtctcaaaaaaaa
ggaaattatatatatatatacatatatatatttcaaaaataaatatgtgc
aatcagttgatattattctttccattcctgaattcaatacatgttagcca
agatttccaagaaaatctttgcataatattttatttatgcatttgtttat
tctaacaatttcatataaatggaatagtagctcttttgtggagagtaatg
catcctataatcacccattttgctatatactaacatctttacagcaacta
gcactatataaagtggttatgcactagttgctttaatgatatatatatcc
attctaggggctaatataaataagactcaaatattgatgtggatttttct
ttttctttttaacacaaaaattttcactatacaggtttagtgtcagtgaa
tattttcgatttttttttaaagatttatttattttctttattggagttgt
cttctgacaaagcagaagaggacattagaacccattactgatggttgtga
gccaccgtgtggttgctgggaattaaactcaggacctctggaaaagcagt
tggttctcttaaccactgagccattcctccagtcctggtccttttcattt
acattaggtctatacctaggaactgaaattgttgctcagatgttagctac
ctgcacgcttaagaatagagaagttattaaacatttttttcaaaatgaat
atttaattttaaattttagcaaaaattcttgatgtttccataccttctta
gtttctgtcgttgttttatgccaacacatttaaattcatgtttcctgata
ttgatttgcatgcatttagtaagtaatgatgctgacatctatgcagggat
ttactggacattatgtattcataatttttcatgcagaaacattaagtttt
gttttacattttcaattttgttaatccttgtgaaactctagggctcttga
tcattgaatttatttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_61516280_61517235
seq2: B6Ng01-054A23.g_66_1020

seq1  GAATTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAAAAAAA  50

seq1  GGAAATTATATATATATATACATATATATATTTCAAAAATAAATATGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTATATATATATATACATATATATATTTCAAAAATAAATATGTGC  100

seq1  AATCAGTTGATATTATTCTTTCCATTCCTGAATTCAATACATGTTAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTTGATATTATTCTTTCCATTCCTGAATTCAATACATGTTAGCCA  150

seq1  AGATTTCCAAGAAAATCTTTGCATAATATTTTATTTATGCATTTGTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCCAAGAAAATCTTTGCATAATATTTTATTTATGCATTTGTTTAT  200

seq1  TCTAACAATTTCATATAAATGGAATAGTAGCTCTTTTGTGGAGAGTAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACAATTTCATATAAATGGAATAGTAGCTCTTTTGTGGAGAGTAATG  250

seq1  CATCCTATAATCACCCATTTTGCTATATACTAACATCTTTACAGCAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTATAATCACCCATTTTGCTATATACTAACATCTTTACAGCAACTA  300

seq1  GCACTATATAAAGTGGTTATGCACTAGTTGCTTTAATGATATATATATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATATAAAGTGGTTATGCACTAGTTGCTTTAATGATATATATATCC  350

seq1  ATTCTAGGGGCTAATATAAATAAGACTCAAATATTGATGTGGATTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGGGGCTAATATAAATAAGACTCAAATATTGATGTGGATTTTTCT  400

seq1  TTTTCTTTTTAACACAAAAATTTTCACTATACAGGTTTAGTGTCAGTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTAACACAAAAATTTTCACTATACAGGTTTAGTGTCAGTGAA  450

seq1  TATTTTCGATTTTTTTTTAAAGATTTATTTATTTTCTTTATTGGAGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCGATTTTTTTTTAAAGATTTATTTATTTTCTTTATTGGAGTTGT  500

seq1  CTTCTGACAAAGCAGAAGAGGACATTAGAACCCATTACTGATGGTTGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGACAAAGCAGAAGAGGACATTAGAACCCATTACTGATGGTTGTGA  550

seq1  GCCACCGTGTGGTTGCTGGGAATTAAACTCAGGACCTCTGGAAAAGCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCGTGTGGTTGCTGGGAATTAAACTCAGGACCTCTGGAAAAGCAGT  600

seq1  TGGTTCTCTTAACCACTGAGCCATTCCTCCAGTCCTGGTCCTTTTCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTCTTAACCACTGAGCCATTCCTCCAGTCCTGGTCCTTTTCATTT  650

seq1  ACATTAGGTCTATACCTAGGAACTGAAATTGTTGCTCAGATGTTAGCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGGTCTATACCTAGGAACTGAAATTGTTGCTCAGATGTTAGCTAC  700

seq1  CTGCACGCTTAAGAATAGAGAAGTTATTAAACATTTTTTTCAAAATGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACGCTTAAGAATAGAGAAGTTATTAAACATTTTTTTCAAAATGAAT  750

seq1  ATTTAATTTTAAATTTTAGCAAAAATTCTTGATGTTTCCATACCTTCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTTTAAATTTTAGCAAAAATTCTTGATGTTTCCATACCTTCTTA  800

seq1  GTTTCTGTCGTTGTTTTATGCCAACACATTTAAATTCATGTTTCCTGATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTCGTTGTTTTATGCCAACACATTTAAATTCATGTTTCCTGATA  850

seq1  TTGATTTGCATGCATTTAGTAAGTAATGATGCTGACATCTATGCAGGGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGCATGCATTTAGTAAGTAATGATGCTGACATCTATGCAGGGAT  900

seq1  TTACTGGACATTATGTATTCATAATTTTTCATGCAGAAAACATTAAGTTT  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTACTGGACATTATGTATTCATAATTTTTCATGCAG-AAACATTAAGTTT  949

seq1  TGTTTT  956
      ||||||
seq2  TGTTTT  955