BAC Information

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BAC

Clone NameB6Ng01-054B09
Chromosome5 (Build37)
Map Location 68,430,378 - 68,430,916
singlet/doubletsinglet
Overlap geneAY616753
Upstream gene3732412D22Rik, Phox2b, Tmem33, Slc30a9, EG666938, C330024D21Rik, D830007B15Rik, Atp8a1, LOC100042458, EG330097, EG666977
Downstream geneLOC666996
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054B09.bB6Ng01-054B09.g
ACCDH876937DH876938
length1,273974
definitionDH876937|Mus musculus domesticus DNA, BAC clone: B6Ng01-054B09, 5' end.DH876938|Mus musculus domesticus DNA, BAC clone: B6Ng01-054B09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatatacacatttacacacatatgaataaatgaagcaaaataaaa
ctccaataacttcatatatacaaatacgcacatacatgtatgcatacaga
tatacagataggcatacatatacacattcacacattgaatgggtagagaa
aagctccagcaagcaggttccaagctctccaaacatacacacacatgtat
atacatatacacatatatgtttgtgtatatgtaagtgctccattttgttg
ctgcatttcttttagacagtaaaatctcggggtcataaactttgaaggtg
ggtgagtggcctcatcccttcactgggagtcctgtctatctattggagat
agtctctacatgtttcatttcctactattaggcattttttttaaattagg
tattttccacatttacattttcaatgctatcccaaaggtcccccataccc
accccccaaacccctacccacccactccccctttttggccctggcgttcc
cctgtactggggcatataaagtttgcaagtccaatgggcctctctttgca
gtgatggccaactaggccatcttttgatacatatgcagctagagacaaga
gctcccgggtactggttagttcatattgttgcaacgcatgaaattcaaga
agaacgaagatcaaagtgtggacactttaccctttcttagaaatgggaac
aaaacacccatagaaggagttacagagacaaaatttggagctgtgacgaa
aggatagaccatctagtgactgccatatgcagggatccatcccataatca
gcttccaaatgctgacaccattgcatacactagcaagatttcgctgaaag
gacccagttatagctctctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgatcacagtcagctattggatgggtcacacggcccctaa
tggaggagctagagaaagtacccaagagctaaagggatctgcaaccctat
aaggtggaacaacaatatgaactatttagcatttggcaagtcatcaccac
taagtccttggacatctcccatcccagttctgggactttctagaagttcc
ctccctgcccctcattccccacagctgcaaattccatcatctcctgcact
agactcctcccggttccccaaaccatatctgtccttgcctacctccttta
accagctcagcctattctggaatttgttctctctaagggtgaacggacca
tgcagatcaactctcatacacat
gaattctaagtttgatttagtgttaacatttaccactggccctagcattt
ccttacaagataagcttagcaatgagctctcagttgtgtgtcggtgaaag
tctttgttcctcctttatatctgaatgacatactttcagattgcagtggt
tttggttggcaaggctccatctccccttcagtagcttgagtgtgtaatct
cgctcctcatgccatgtgatgttcctgctgagacatttgattcataggca
gttctttggatggcactttctttatggtcatgctttctgaaccatctctt
ggagtctggacattgatagcttgattggaatgtggcttctggtgctttta
tttcaattaaatgtgactgatgtccttttccttttttgtaccctgatatt
tatatctttctgcaggtttggaaagtctcatgctatcgcttctataagta
agccttctattcctatccctcctcctccttgaatgctaacagcttgtacc
tttgctctttagatgctatactataaaccatttaagctttcctcattctt
tttcattcttttttctttttctcctctgattggaatatttcaatgtctgg
gttgccaccagccggcccatccagaatcccaggctagaattagaaaagat
ctagtgtcaccaaagaatgccaacaaaggttcgaagaggccgtcgtctca
tcaaatgagcagacatcagcataaagacacttggacgatgaaaaaccaga
gaaacacagcaccatcaaaagaaaccaagaaaactccagaaactgatgaa
gatgaacgggtgatctatgaattgacagacaagcaattcagaatggtcct
tttaaagaagttcagagaattacaagaaatacggacagaaaactaagtga
atccgggaaataattcatgaacaacatgagatgtttgacagagaaataaa
agttaatcatttcaaaataaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_68430378_68430916
seq2: B6Ng01-054B09.g_68_606

seq1  GAATTCTAAGTTTGATTTAGTGTTAACATTTACCACTGGCCCTAGCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGTTTGATTTAGTGTTAACATTTACCACTGGCCCTAGCATTT  50

seq1  CCTTACAAGATAAGCTTAGCAATGAGCTCTCAGTTGTGTGTCGGTGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACAAGATAAGCTTAGCAATGAGCTCTCAGTTGTGTGTCGGTGAAAG  100

seq1  TCTTTGTTCCTCCTTTATATCTGAATGACATACTTTCAGATTGCAGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTCCTCCTTTATATCTGAATGACATACTTTCAGATTGCAGTGGT  150

seq1  TTTGGTTGGCAAGGCTCCATCTCCCCTTCAGTAGCTTGAGTGTGTAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTGGCAAGGCTCCATCTCCCCTTCAGTAGCTTGAGTGTGTAATCT  200

seq1  CGCTCCTCATGCCATGTGATGTTCCTGCTGAGACATTTGATTCATAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCCTCATGCCATGTGATGTTCCTGCTGAGACATTTGATTCATAGGCA  250

seq1  GTTCTTTGGATGGCACTTTCTTTATGGTCATGCTTTCTGAACCATCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTGGATGGCACTTTCTTTATGGTCATGCTTTCTGAACCATCTCTT  300

seq1  GGAGTCTGGACATTGATAGCTTGATTGGAATGTGGCTTCTGGTGCTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTGGACATTGATAGCTTGATTGGAATGTGGCTTCTGGTGCTTTTA  350

seq1  TTTCAATTAAATGTGACTGATGTCCTTTTCCTTTTTTGTACCCTGATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTAAATGTGACTGATGTCCTTTTCCTTTTTTGTACCCTGATATT  400

seq1  TATATCTTTCTGCAGGTTTGGAAAGTCTCATGCTATCGCTTCTATAAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTTTCTGCAGGTTTGGAAAGTCTCATGCTATCGCTTCTATAAGTA  450

seq1  AGCCTTCTATTCCTATCCCTCCTCCTCCTTGAATGCTAACAGCTTGTACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCTATTCCTATCCCTCCTCCTCCTTGAATGCTAACAGCTTGTACC  500

seq1  TTTGCTCTTTAGATGCTATACTATAAACCATTTAAGCTT  539
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCTTTAGATGCTATACTATAAACCATTTAAGCTT  539