BAC Information

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BAC

Clone NameB6Ng01-055E12
Chromosome5 (Build37)
Map Location 14,494,820 - 14,495,695
singlet/doubletsinglet
Overlap genenone
Upstream geneSema3a, LOC208055, LOC626053, Speer3, EG626067, LOC668085, LOC384149, LOC384148, Sema3e, LOC100042957
Downstream genePclo, ENSMUSG00000033219, LOC624245, Speer8-ps1, Speer4c, Speer4d, 4930572O03Rik, Speer7-ps1, 4930519H02Rik, LOC100041781, Cacna2d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055E12.bB6Ng01-055E12.g
ACCDH877776DH877777
length1,156876
definitionDH877776|Mus musculus domesticus DNA, BAC clone: B6Ng01-055E12, 5' end.DH877777|Mus musculus domesticus DNA, BAC clone: B6Ng01-055E12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacctgaggaatactgaatggctgagaagcacctgaaaaaaat
gttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaactggatatagtactaccagaggattctgcaatacctctcctggg
catatatccagaagatgttccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtgcatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggtatcatcctgagtcaggtaacccaatcacaa
agcaacgcacaccatatgtactcactgataagtggatattagcccataaa
cttaggatacccaagatataagatacaatttgctaaatgcatgaaactca
agaagaacgaagaccaaagtgtgtacactttgccccttcttagaattggg
aacaaaacacccatggaaggagttacagagacaaagcttggaattgtgtc
aaaaggatggaccatctagagcctgccatattcagggttgcatcccataa
tcagcttccaaacgctgacaccattgcatattctagcaagattttactga
aaggacccagatatagctgtgtcttgtgagactatgccggggcctagcaa
acacagaagtggatgctcacagtcagttattggatggatcacagggcccc
catggaggagctagagaagtacccagagctaagggatctgcaccctatag
tagacacatatgactagagtacccgagctcttcactcttagctgctatgt
atcaaagatgctagtcagccatcacttgaagagagccattagactgcaac
ttaattgcctcagtacaggacgccaggtcaattggatggtaggtagaggg
aatgtg
gaattctaagctcagggttggcttcaaggacttcctaggacattgggaca
ctggtggaggctaattcaacttagctatatgtcaaaatcaatctttaaag
gcacttataataaaacaatattgagggagagcacacaggtccatacacca
gactaacgcagggacaggtttgaagcataagtgctataggaatgccaagg
ttccaggaggctaagttccatgaagctctttgcctcaggactgcttccag
gtttctaggcctgtcacatgattcactactggagtggatgtagcatcctt
gtatcaattccatcaggccttcacatacatcaactaggtctctgatgaag
cttctttcaagccaattttgattctactcaatttgctttcatgtactgat
ttatcagatttcattttcctaccggttacttttggaatttttaagatcta
cacatttttttgttatttgtgttttgttgtaattattctcactagataag
aatgtaagcttcattaggaaatttaccatgtacttcagtgctacttctgt
attttagtcattagcatgagataattggattaaaagagtcagacctcttg
tttattagttttggttgcatacctgaatcatttttcttcagtagaacttt
atattcttgtgttttttaaatatttattggacatttagtattagaatgtt
tgatttccttatatactattggtagtagttttttaatgcatatattgtta
acaaacactatgtatttattaaatctgccttgtttatttcctttattaca
tagaagcattttagtcacatttattattatgctgtggtttatgtgtaagt
gtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_14494820_14495695
seq2: B6Ng01-055E12.g_67_942

seq1  GAATTCTAAGCTCAGGGTTGGCTTCAAGGACTTCCTAGGACATTGGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCTCAGGGTTGGCTTCAAGGACTTCCTAGGACATTGGGACA  50

seq1  CTGGTGGAGGCTAATTCAACTTAGCTATATGTCAAAATCAATCTTTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGAGGCTAATTCAACTTAGCTATATGTCAAAATCAATCTTTAAAG  100

seq1  GCACTTATAATAAAACAATATTGAGGGAGAGCACACAGGTCCATACACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTATAATAAAACAATATTGAGGGAGAGCACACAGGTCCATACACCA  150

seq1  GACTAACGCAGGGACAGGTTTGAAGCATAAGTGCTATAGGAATGCCAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAACGCAGGGACAGGTTTGAAGCATAAGTGCTATAGGAATGCCAAGG  200

seq1  TTCCAGGAGGCTAAGTTCCATGAAGCTCTTTGCCTCAGGACTGCTTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGAGGCTAAGTTCCATGAAGCTCTTTGCCTCAGGACTGCTTCCAG  250

seq1  GTTTCTAGGCCTGTCACATGATTCACTACTGGAGTGGATGTAGCATCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTAGGCCTGTCACATGATTCACTACTGGAGTGGATGTAGCATCCTT  300

seq1  GTATCAATTCCATCAGGCCTTCACATACATCAACTAGGTCTCTGATGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAATTCCATCAGGCCTTCACATACATCAACTAGGTCTCTGATGAAG  350

seq1  CTTCTTTCAAGCCAATTTTGATTCTACTCAATTTGCTTTCATGTACTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTCAAGCCAATTTTGATTCTACTCAATTTGCTTTCATGTACTGAT  400

seq1  TTATCAGATTTCATTTTCCTACCGGTTACTTTTGGAATTTTTAAGATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGATTTCATTTTCCTACCGGTTACTTTTGGAATTTTTAAGATCTA  450

seq1  CACATTTTTTTGTTATTTGTGTTTTGTTGTAATTATTCTCACTAGATAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTTTTTGTTATTTGTGTTTTGTTGTAATTATTCTCACTAGATAAG  500

seq1  AATGTAAGCTTCATTAGGAAATTTACCATGTACTTCAGTGCTACTTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGCTTCATTAGGAAATTTACCATGTACTTCAGTGCTACTTCTGT  550

seq1  ATTTTAGTCATTAGCATGAGATAATTGGATTAAAAGAGTCAGACCTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTCATTAGCATGAGATAATTGGATTAAAAGAGTCAGACCTCTTG  600

seq1  TTTATTAGTTTTGGTTGCATACCTGAATCATTTTTCTTCAGTAGAACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGTTTTGGTTGCATACCTGAATCATTTTTCTTCAGTAGAACTTT  650

seq1  ATATTCTTGTGTTTTTTAAATATTTATTGGACATTTAGTATTAGAATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTGTGTTTTTTAAATATTTATTGGACATTTAGTATTAGAATGTT  700

seq1  TGATTTCCTTATATACTATTGGTAGTAGTTTTTTAATGCATATATTGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCCTTATATACTATTGGTAGTAGTTTTTTAATGCATATATTGTTA  750

seq1  ACAAACACTATGTATTTATTAAATCTGCCTTGTTTATTTCCTTTATTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACTATGTATTTATTAAATCTGCCTTGTTTATTTCCTTTATTACA  800

seq1  TAGAAGCATTTTAGTCACATTTATTATTATGCTGTGGTTTATGTGTAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCATTTTAGTCACATTTATTATTATGCTGTGGTTTATGTGTAAGT  850

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGT  876
      ||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGT  876