BAC Information

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BAC

Clone NameB6Ng01-057H14
Chromosome5 (Build37)
Map Location 134,388,299 - 134,389,061
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039731, LOC666038
Downstream geneLOC100039750, Gats, Wbscr16, Gtf2ird2, Ncf1, Gtf2i, LOC630424, Gtf2ird1, LOC100039820, Clip2, EG666071, Gm52, Rfc2, Lat2, Eif4h, LOC638081, Limk1, Eln, Wbscr28
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057H14.bB6Ng01-057H14.g
ACCDH879331DH879332
length760659
definitionDH879331|Mus musculus domesticus DNA, BAC clone: B6Ng01-057H14, 5' end.DH879332|Mus musculus domesticus DNA, BAC clone: B6Ng01-057H14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttcccagcaccccaaatggcacataaccacttgtgactctag
cttcagggggtctcacaccctcctctttcttccccaggcactcacacata
tctgcacctacccacatcaatatacatgattttttttaatcaataaaata
aatctttaaaaaaaaataaaacgttttctgctctccttgactagtaaatt
ggaggtgaaagaaatgtcttctatttctctgagtgactaagcctggaaat
agcattgcttttggctttcccttcctttggtccattttttttcagggcga
aagcaagcatgagataaatttcccagcctttctcccaacacccacataac
aaatctcacttaaggcagatttaaaatgcagtattgtggagtggtaccta
ttactcgcgacagcacgatgctcttccccacaagtctggtcaccattata
tataatttatgaatccagcccagagacaagctacggataaaatgaacaca
gactccagtgtctgtggtaatgaaatcgctttctggtttcatgtccctct
gagttcaggctctcatttccatttctccatttcttcccaatttgttacca
aagtgacggacgctccaatttatcttgtctttccgtcgtctcttcccctg
gcttcctcccctgcaatccagttaagccgtggccttttgctgggccatgc
acttattttccaattactgagggtaaacggaatgaacctgcaattgaaat
tgagctctcg
gaattcactgagaagtgggctggccttaacttctaggagaagcgggaagc
caagacttccagctctctcttaggctactggtgtcctgtgtcattttatt
tcctcgcttcttgtcttctgtcctggaaggtgccatcaactacagctaga
ctaagtgtgacggttagtcttcactgtcaactcaaatggatttaagtaca
gatgtgatgtgaccaacagctgtgtcatggaactgtcaccatgccatctc
cactacagtaaactgtcctctctatccctgagtcacacgaacccttcctc
ccttaagttagtatcttagttcctatcactgtgatgaaacactaaaccag
aaaaacaagcgggggaggggaaggattttttggctttcacttccagatca
tagtccatcactggaggaagtcaggaccagaactcaaacagggctggaac
ctggaggcggagctgaagcagaggccatggagggtgctggctttgctcaa
catgcttttttgtagaatccaggactactggcccatggataactccacct
accatagtctgagcccacccctgttgatcactgagtgagaaaatgcctca
tttggagtgctggatcttatgaaggcatttcctcaattgaggctcttttt
tctgtgaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_134388299_134389061
seq2: B6Ng01-057H14.b_46_805

seq1  GAATTCAGTTCCCAGCACCCCAAATGGCACATAACCACTTGTGACTCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCCAGCACCCCAAATGGCACATAACCACTTGTGACTCTAG  50

seq1  CTTCAGGGGGTCTCACACCCTCCTCTTTCTTCCCCAGGCACTCACACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGGGGTCTCACACCCTCCTCTTTCTTCCCCAGGCACTCACACATA  100

seq1  TCTGCACCTACCCACATCAATATACATGATTTTTTTTAATCAATAAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACCTACCCACATCAATATACATGATTTTTTTTAATCAATAAAATA  150

seq1  AATCTTTAAAAAAAAATAAAACGTTTTCTGCTCTCCTTGACTAGTAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTAAAAAAAAATAAAACGTTTTCTGCTCTCCTTGACTAGTAAATT  200

seq1  GGAGGTGAAAGAAATGTCTTCTATTTCTCTGAGTGACTAAGCCTGGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGAAAGAAATGTCTTCTATTTCTCTGAGTGACTAAGCCTGGAAAT  250

seq1  AGCATTGCTTTTGGCTTTCCCTTCCTTTGGTCCATTTTTTTTCAGGGCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGCTTTTGGCTTTCCCTTCCTTTGGTCCATTTTTTTTCAGGGCGA  300

seq1  AAGCAAGCATGAGATAAATTTCCCAGCCTTTCTCCCAACACCCACATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGCATGAGATAAATTTCCCAGCCTTTCTCCCAACACCCACATAAC  350

seq1  AAATCTCACTTAAGGCAGATTTAAAATGCAGTATTGTGGAGTGGTACCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCACTTAAGGCAGATTTAAAATGCAGTATTGTGGAGTGGTACCTA  400

seq1  TTACTCGCGACAGCACGATGCTCTTCCCCACAAGTCTGGTCACCATTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCGCGACAGCACGATGCTCTTCCCCACAAGTCTGGTCACCATTATA  450

seq1  TATAATTTATGAATCCAGCCCAGAGACAAGCTACGGAGAAAATGAACACA  500
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TATAATTTATGAATCCAGCCCAGAGACAAGCTACGGATAAAATGAACACA  500

seq1  GACTCCAGTGTCTGTGGTAATGAAATCGCTTTCTGGTTTCATGTCCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAGTGTCTGTGGTAATGAAATCGCTTTCTGGTTTCATGTCCCTCT  550

seq1  GAGTTCAGGCTCTCATTTCCATTTCTCCATTTCTTCCCAAATTTGTTACC  600
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAGTTCAGGCTCTCATTTCCATTTCTCCATTTCTTCCC-AATTTGTTACC  599

seq1  AAAGTGACGGACGCTCCAATTTACCATGTCTTTCCGTCGTCTCTTCCCCT  650
      ||||||||||||||||||||||| | ||||||||||||||||||||||||
seq2  AAAGTGACGGACGCTCCAATTTATCTTGTCTTTCCGTCGTCTCTTCCCCT  649

seq1  GGCTTCCTCCCCTGCAATCCAGTAAAAGCCGTGGCCTTTTGCTGGGCCAT  700
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  GGCTTCCTCCCCTGCAATCCAGT-TAAGCCGTGGCCTTTTGCTGGGCCAT  698

seq1  GCACTTATTTTCCAATTACTGTGGGTAAACAGGAATGAACCTGCAATTGA  750
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  GCACTTATTTTCCAATTACTGAGGGTAAAC-GGAATGAACCTGCAATTGA  747

seq1  ATTGAAGCTCTCG  763
      | |  ||||||||
seq2  AATTGAGCTCTCG  760