This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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BAC name
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Search Result
BAC
Clone Name
B6Ng01-058A09
Chromosome
5 (Build37)
Map Location
132,342,373 - 132,359,795
singlet/doublet
doublet
Overlap gene
Auts2
,
4930563F08Rik
Upstream gene
Wbscr17
Downstream gene
none
Link
Open Mouse BAC browser
Click to get alignment info.
name
Wbscr17
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:212996
MGI:2137594
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Auts2
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:319974
MGI:1919847
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
4930563F08Rik
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:75369
MGI:1922619
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST
name
Wbscr17
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:110347503
GeneID:212996
MGI:2137594
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: Williams-Beuren syndrome chromosome region 17 homolog (human)
transcript_id
: NM_145218.3
name
Auts2
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:124486585
GeneID:319974
MGI:1919847
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: autism susceptibility candidate 2
transcript_id
: NM_177047.3
name
4930563F08Rik
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:94375687
GeneID:75369
MGI:1922619
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST
product
: RIKEN cDNA 4930563F08 gene
transcript_id
: XM_896981.2
name
Wbscr17
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:32401429
GeneID:212996
MGI:2137594
definition
GO_component
: GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO_function
: GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]
codon_start
: 1
note
: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase; protein-UDP acetylgalactosaminyltransferase-like protein 3
product
: UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-like 3
protein_id
: NP_660253.2
name
Auts2
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:124486586
GeneID:319974
MGI:1919847
definition
GO_component
: GO:0005575 - cellular_component [Evidence ND]
GO_function
: GO:0003674 - molecular_function [Evidence ND]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA]
GO_process
: GO:0008150 - biological_process [Evidence ND]
codon_start
: 1
exception
: unclassified translation discrepancy
note
: autism susceptibility candidate 2-like
product
: autism susceptibility candidate 2
protein_id
: NP_796021.2
name
4930563F08Rik
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:82899625
GeneID:75369
MGI:1922619
definition
codon_start
: 1
product
: hypothetical protein LOC75369
protein_id
: XP_902074.1
clone name
MSMg01-409L13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-478J09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-232O07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-329J05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-348E08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-306D14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-053M19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-385I01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-483C06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-046C19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-168B23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-130F11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-173D04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-261E14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-459J15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-405M23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-547N11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-538L13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-416I18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-427M22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-425O07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-289A10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-441D08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-434C01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-185A11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-408M15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-397B12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-349L19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-149I11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-391E05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-064O02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-342A24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-403M03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-466J02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-178O15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-263H09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-361J13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-108E21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-416I24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-379G03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-233M20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-341N12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-489F05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-421K22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-526I14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-535C03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-056I19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-359D14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-531A14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-508M05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-530D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-068K03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-067P21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-345I08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-385M05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-497E17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-153I21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-451B15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-416I06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-363C12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-170I24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181N16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-382J02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-527B13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-288E12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-053K02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-406M07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-361E17
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-270L18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-053E24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-327A16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-059C03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-097I14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-435P02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-319H03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-417C09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-148D22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181K03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-467D21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-429C13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-450K02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-159C21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-545A17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-519D15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-491K18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-236D23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-435K09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-145J06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-458H03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-103O19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-280L08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-273F10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-180I18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-180I19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-321I07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-411F03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-531M12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-496H14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-503J22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-384N14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-538H22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-106G04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-092A21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-288F11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-212J23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-165C18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-143N15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-044E15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-321A15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-115F08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-271J14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-187O08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-264J20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-180P02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-335P22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-162J03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-144O14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-088J04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-092J01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-207A13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-050I16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-320F23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-198O05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-240B01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-120F17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-165L23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-319L01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-194J13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-222I16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-110N17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-155O18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-066N10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-281M18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-177L08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-236N02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-206I05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-148G12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-049C14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-048K21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-088B24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-058A09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-012I06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-081C11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-204G15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-320N11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-231O13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-077K01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-288A19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-018C10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-266C08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-298E07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-207O14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-055C24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-302N14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-283P11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-242B24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-132M14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-093D13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-125C21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-268O09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-073M02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-113A23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-202C10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-162B19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-088O15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-297A02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-011O04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-181M22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-109L17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-207C05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-284P21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-021G10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-053C21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-195D16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-135O21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-252F15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-335J10
singlet/doublet
singlet
plural/unique
unique