BAC Information

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BAC

Clone NameB6Ng01-058A09
Chromosome5 (Build37)
Map Location 132,342,373 - 132,359,795
singlet/doubletdoublet
Overlap geneAuts2, 4930563F08Rik
Upstream geneWbscr17
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058A09.bB6Ng01-058A09.g
ACCDH879717DH879718
length1,0671,065
definitionDH879717|Mus musculus domesticus DNA, BAC clone: B6Ng01-058A09, 5' end.DH879718|Mus musculus domesticus DNA, BAC clone: B6Ng01-058A09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,342,373 - 132,343,445)(132,358,706 - 132,359,795)
sequence
gaattctgtactatacctggctttatgtgtgtgctggggattcaaagtca
ggtacataggctagcatggcaaagactttatcccctgaactctctctagc
cccggcttggcatctgggagacacttacatagggaatgtgtgtgtatctc
caaacaccttcctgtaactgagggaaaagaagttgaagcctttcccaaag
ggagtatggcatgtaatgtaaacgccaaaactttcgttggtggaattaaa
tgctagggtctcgggccgacagttcccgggtctgcttaagtggaggcaca
aagatctacaagtcaaggactacatgttagaatatactcagggtgctgac
catgacacctgcatttccagcaaggttcaaggaacgtgcttcagtgggca
gagtggtagcccagtgtgcacgatgtactgactctgtccccagcagcaca
gaacaatagtgatagcacaccactctgaccccagcactcagggaggcgtg
ggcaggaggattaagattcaagtccttagttatataccaatttcattgcc
aacctgaaggagatcctatctgagactctgccctaatacccatccctcca
gagggggagaaacaaaacaaaacaaaacaataacagaatcagaatgagaa
tagttcttttcctgcattgtctggaaaggggggatgtaaatgctgcatgg
tatatcctatcaagcgtactcttggaatatttgaggctctccaattatta
ctaccgatattgttattttgttgttgttgttcattagcacttataagatg
aaagtgtgaaaaaagcaggaaagtcaaacttctctgcgacagcctctgtt
cacagtttcacacacacacaaaatggttaggaaaaaggacaataagccat
ggatctaaattaagtatgggggaggggggagtctaccgatcacactccct
tggcctgctcattccttacgtggcatttcttctcactgctggtgctgtgg
agagaatttccattcatctcaaggcctctagattttggagtaccagtgtg
taagcacataaggcatg
gaattcatcatgagctgtgaaaaggtgtttgtcaggattattatccagga
gataataactgctatctcgagtacttactggttggtcacagcattttaac
actgcttttgtttctgttctggtgctatgatccaatactcagaacaaaag
caacctagaaaagggaagagtttatttctgcttataattccaggtcacgg
tctgttaatgcaggaaggcaagtcaggaaactgaaggtaggccttcttgc
tgattcgttcagcattgtcactgaccaagcaccaaggaactcacttcaca
gagagaaagttgagcaggagtcatggaggatgctgttttctggctcactt
gccagcgtatgattggtgattcaaaaccacttaactagtcagtggtgcca
cccacagtgggatgtgccctttcatatcaaataccagtcaagataacccc
ctacaatcatgcccatctgatgtagacatttccttaattgaagctctcct
ctcagatcctctaggctgggccaagttgacaattaaagctaacgaagaca
gacattttgtatatcaagtgaaggcatctgaagaatccatggttgtagtt
tcctgagaatttacagaaacaaaagcagagaagtgagatgtcaaggtgca
accctgcacctcatagtatgtagactagagagaaccagataggggaagga
aagggtgaaatgtcgcttcgggatgtttagctatgacagtgctagattca
gaaccacaaggacttatagcagtaacatcttaaagacagtaattgtgggg
tggagaggtggctcagaggttgggaacacctgttctgtaggacggaattc
agtttccaacacccatgaggggtagctcacacctgcctgtaattccagtt
ccagggatctacagccctcttctggtctgtgcagcactgccctcacatca
catagtaaaagaaacaaacaaacacaataaacaacaacaacacgtgtcac
agagaaatggggcgtaactctaattgtgactgattgcgatggagaaagat
tcataatgcccactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_132342373_132343445
seq2: B6Ng01-058A09.b_45_1111

seq1  GAATTCTGTACTATACCTGGCTTTATGTGTGTGCTGGGGATTCAAAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTACTATACCTGGCTTTATGTGTGTGCTGGGGATTCAAAGTCA  50

seq1  GGTACATAGGCTAGCATGGCAAAGACTTTATCCCCTGAACTCTCTCTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATAGGCTAGCATGGCAAAGACTTTATCCCCTGAACTCTCTCTAGC  100

seq1  CCCGGCTTGGCATCTGGGAGACACTTACATAGGGAATGTGTGTGTATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGCTTGGCATCTGGGAGACACTTACATAGGGAATGTGTGTGTATCTC  150

seq1  CAAACACCTTCCTGTAACTGAGGGAAAAGAAGTTGAAGCCTTTCCCAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACCTTCCTGTAACTGAGGGAAAAGAAGTTGAAGCCTTTCCCAAAG  200

seq1  GGAGTATGGCATGTAATGTAAACGCCAAAACTTTCGTTGGTGGAATTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTATGGCATGTAATGTAAACGCCAAAACTTTCGTTGGTGGAATTAAA  250

seq1  TGCTAGGGTCTCGGGCCGACAGTTCCCGGGTCTGCTTAAGTGGAGGCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGGTCTCGGGCCGACAGTTCCCGGGTCTGCTTAAGTGGAGGCACA  300

seq1  AAGATCTACAAGTCAAGGACTACATGTTAGAATATACTCAGGGTGCTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTACAAGTCAAGGACTACATGTTAGAATATACTCAGGGTGCTGAC  350

seq1  CATGACACCTGCATTTCCAGCAAGGTTCAAGGAACGTGCTTCAGTGGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACACCTGCATTTCCAGCAAGGTTCAAGGAACGTGCTTCAGTGGGCA  400

seq1  GAGTGGTAGCCCAGTGTGCACGATGTACTGACTCTGTCCCCAGCAGCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGTAGCCCAGTGTGCACGATGTACTGACTCTGTCCCCAGCAGCACA  450

seq1  GAACAATAGTGATAGCACACCACTCTGACCCCAGCACTCAGGGAGGCGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATAGTGATAGCACACCACTCTGACCCCAGCACTCAGGGAGGCGTG  500

seq1  GGCAGGAGGATTAAGATTCAAGTCCTTAGTTATATACCAATTTCATTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAGGATTAAGATTCAAGTCCTTAGTTATATACCAATTTCATTGCC  550

seq1  AACCTGAAGGAGATCCTATCTGAGACTCTGCCCTAATACCCATCCCTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAAGGAGATCCTATCTGAGACTCTGCCCTAATACCCATCCCTCCA  600

seq1  GAGGGGGAGAAACAAAACAAAACAAAACAATAACAGAATCAGAATGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGAGAAACAAAACAAAACAAAACAATAACAGAATCAGAATGAGAA  650

seq1  TAGTTCTTTTCCTGCATTGTCTGGAAAGGGGGGATGTAAATGCTGCATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTTTCCTGCATTGTCTGGAAAGGGGGGATGTAAATGCTGCATGG  700

seq1  TATATCCTATCAAGCGTACTCTTGGAATATTTGAGGCTCTCCAATTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCTATCAAGCGTACTCTTGGAATATTTGAGGCTCTCCAATTATTA  750

seq1  CTACCGATATTGTTATTTTGTTGTTGTTGTTCATTAGCACTTATAAGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCGATATTGTTATTTTGTTGTTGTTGTTCATTAGCACTTATAAGATG  800

seq1  AAAGTGTGAAAAAAGCAGGGAAAGTCAAACTTCTCTGCGACAGCCTCTGT  850
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAAGTGTGAAAAAAGCA-GGAAAGTCAAACTTCTCTGCGACAGCCTCTGT  849

seq1  TCACAGTTTCACACACACACAAAATGGTTAGGAAAAAGGACAATAAGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTTTCACACACACACAAAATGGTTAGGAAAAAGGACAATAAGCCA  899

seq1  TGGATCTAAAATTAAGTAAGGGGGGAGGGGGGAGTCTACCGATCACACTC  950
      ||||||| ||||||||| | ||||||||||||||||||||||||||||||
seq2  TGGATCT-AAATTAAGT-ATGGGGGAGGGGGGAGTCTACCGATCACACTC  947

seq1  CCTTGGCCTGGCTCATTCCTTACGT-GCATTTCTCCTCACTGCT-GTGCT  998
      ||||||||| ||||||||||||||| |||||||| ||||||||| |||||
seq2  CCTTGGCCT-GCTCATTCCTTACGTGGCATTTCTTCTCACTGCTGGTGCT  996

seq1  GTGGAGGAGATTTTCATTTTCATTCCTAAGGCCTCTAGATTTTGTAGTAC  1048
      ||||||   |||| ||  |||| ||  ||||||||||||||||| |||||
seq2  GTGGAGAGAATTTCCA--TTCA-TCTCAAGGCCTCTAGATTTTGGAGTAC  1043

seq1  ACGTGTGTATGCACATAGAGGCATG  1073
        ||||||| ||||||| |||||||
seq2  CAGTGTGTAAGCACATA-AGGCATG  1067

seq1: chr5_132358706_132359795
seq2: B6Ng01-058A09.g_70_1134 (reverse)

seq1  AAGTGGGGCATTATGAAAATCTTTTCTCCATCGCAATTCAGTCAACATAT  50
      |||| ||||||||||  |||| |||||||||||||| |||||| ||| ||
seq2  AAGT-GGGCATTATG--AATC-TTTCTCCATCGCAA-TCAGTC-ACA-AT  43

seq1  GAGAGTTTAACGCCCCATTTTCTCTGTGACACGTGTTTGTTTTGTTTGTT  100
       ||||||  |||||||| ||||||||||||||||| |||||    |||||
seq2  TAGAGTT--ACGCCCCA-TTTCTCTGTGACACGTG-TTGTT---GTTGTT  86

seq1  TATT-TGTTTGTTTGTTTTGTTTTTCTTTTTACTATGTGGATGTGAGGGC  149
      |||| |||||||||||||         ||||||||||| |||||||||||
seq2  TATTGTGTTTGTTTGTTT--------CTTTTACTATGT-GATGTGAGGGC  127

seq1  AGTGCCTGCACAGACCAGAAGAGGGCTGTAGATTCCTTGGAACTGGAATT  199
      |||| ||||||||||||||||||||||||||| ||| |||||||||||||
seq2  AGTG-CTGCACAGACCAGAAGAGGGCTGTAGA-TCCCTGGAACTGGAATT  175

seq1  ACAGGCAGGTGTGAGCTACCCCTCATGGGTGTTGGAAACTGAATTCCGGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACAGGCAGGTGTGAGCTACCCCTCATGGGTGTTGGAAACTGAATTCC-GT  224

seq1  CCTACAGAACAGGTGTTCCCAACCTCTGAGCCACCTCTCCACCCCACAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGAACAGGTGTTCCCAACCTCTGAGCCACCTCTCCACCCCACAAT  274

seq1  TACTGTCTTTAAGATGTTACTGCTATAAGTCCTTGTGGTTCTGAATCTAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCTTTAAGATGTTACTGCTATAAGTCCTTGTGGTTCTGAATCTAG  324

seq1  CACTGTCATAGCTAAACATCCCGAAGCGACATTTCACCCTTTCCTTCCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCATAGCTAAACATCCCGAAGCGACATTTCACCCTTTCCTTCCCC  374

seq1  TATCTGGTTCTCTCTAGTCTACATACTATGAGGTGCAGGGTTGCACCTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGTTCTCTCTAGTCTACATACTATGAGGTGCAGGGTTGCACCTTG  424

seq1  ACATCTCACTTCTCTGCTTTTGTTTCTGTAAATTCTCAGGAAACTACAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTCACTTCTCTGCTTTTGTTTCTGTAAATTCTCAGGAAACTACAAC  474

seq1  CATGGATTCTTCAGATGCCTTCACTTGATATACAAAATGTCTGTCTTCGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATTCTTCAGATGCCTTCACTTGATATACAAAATGTCTGTCTTCGT  524

seq1  TAGCTTTAATTGTCAACTTGGCCCAGCCTAGAGGATCTGAGAGGAGAGCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTAATTGTCAACTTGGCCCAGCCTAGAGGATCTGAGAGGAGAGCT  574

seq1  TCAATTAAGGAAATGTCTACATCAGATGGGCATGATTGTAGGGGGTTATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAAGGAAATGTCTACATCAGATGGGCATGATTGTAGGGGGTTATC  624

seq1  TTGACTGGTATTTGATATGAAAGGGCACATCCCACTGTGGGTGGCACCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGGTATTTGATATGAAAGGGCACATCCCACTGTGGGTGGCACCAC  674

seq1  TGACTAGTTAAGTGGTTTTGAATCACCAATCATACGCTGGCAAGTGAGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGTTAAGTGGTTTTGAATCACCAATCATACGCTGGCAAGTGAGCC  724

seq1  AGAAAACAGCATCCTCCATGACTCCTGCTCAACTTTCTCTCTGTGAAGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAGCATCCTCCATGACTCCTGCTCAACTTTCTCTCTGTGAAGTG  774

seq1  AGTTCCTTGGTGCTTGGTCAGTGACAATGCTGAACGAATCAGCAAGAAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTTGGTGCTTGGTCAGTGACAATGCTGAACGAATCAGCAAGAAGG  824

seq1  CCTACCTTCAGTTTCCTGACTTGCCTTCCTGCATTAACAGACCGTGACCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTTCAGTTTCCTGACTTGCCTTCCTGCATTAACAGACCGTGACCT  874

seq1  GGAATTATAAGCAGAAATAAACTCTTCCCTTTTCTAGGTTGCTTTTGTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTATAAGCAGAAATAAACTCTTCCCTTTTCTAGGTTGCTTTTGTTC  924

seq1  TGAGTATTGGATCATAGCACCAGAACAGAAACAAAAGCAGTGTTAAAATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATTGGATCATAGCACCAGAACAGAAACAAAAGCAGTGTTAAAATG  974

seq1  CTGTGACCAACCAGTAAGTACTCGAGATAGCAGTTATTATCTCCTGGATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACCAACCAGTAAGTACTCGAGATAGCAGTTATTATCTCCTGGATA  1024

seq1  ATAATCCTGACAAACACCTTTTCACAGCTCATGATGAATTC  1090
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCTGACAAACACCTTTTCACAGCTCATGATGAATTC  1065