BAC Information

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BAC

Clone NameB6Ng01-067G07
Chromosome5 (Build37)
Map Location 19,426,168 - 19,554,492
singlet/doubletdoublet
Overlap geneMagi2
Upstream gene4921504A21Rik
Downstream geneLOC100041850, Phtf2, LOC622367, Tmem60, Rsbn1l, Ptpn12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067G07.bB6Ng01-067G07.g
ACCDH886296DH886297
length1,208563
definitionDH886296|Mus musculus domesticus DNA, BAC clone: B6Ng01-067G07, 5' end.DH886297|Mus musculus domesticus DNA, BAC clone: B6Ng01-067G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,553,253 - 19,554,492)(19,426,168 - 19,426,736)
sequence
gaattcaatagcacttggttcaaaatagaggtgtgactaaaaataatgac
acagttttctttctgactacacctggctatatgagtaatagagaaaatgt
tcttttccagccacttgtagtaactgagctgtgaagtcatctccagatta
actgagcccaatgtcaccactgttgttatgtgtgatattgcccaggtagc
gacaggagaacaacacaggaaagtgtttaacctctgggttaatagcagta
cataatcatactaatgctaagagtcatcgcttatgaaacgtgagtaagag
agtcatccatgaaaaacatgctgcaagaatgcaatcagaaaaaataaatt
tttaaaagtaaattccttgtgtctatgcaatagcagaaagtatacttagt
gcaatgagcatgctaaacaagaactctatttctgagctctacccctagcc
ttcattccactttcacagtcagagtcgtgctaagtggactattctgccct
taaactcactctatagcctcagcagtctgtagatttggagttttcctgac
tttagtcttatgctaaccaagactacagtctctactgtgagacccaactg
tcttctcacattctgaagtgcataggaattccctagacttatatttaagg
taattaggcctgagtgtgggctgctataatggatatataataagctttta
gaagatgctgttgctggaccacatgttgaacaacaaggtttcagcctggc
ctgcaatgggtaacttaggggtataccctatgctatttccttagttcctc
ttctttatgcctctatctttgtagctttagagcttcagttttggccaaca
actacaactgcttgttctcttgtatcacagatgattgggggagtacacca
gagttaaatagctcattatgtttatagactttattgcttttaccaagcaa
taaagaaagaacatccttcatgctattgtctgaactctttagtccaggaa
gagtaaaaaggagtcaatttatgattagactagtaggaaagtagaactca
tgtggaatagtaatataattttaaagcaaatttctcttgttcatcacatg
ggaaggtgaggaagtcaacttagactgatcttgccaagacagtttctgtg
accaatgatgggtaatgatagaacagacacaatttaagggtggtctgtga
atttattt
actaatgttcgctggatttagcaacagagacatcaagagaataaggagag
aaaaggagacagagcacagatagttcccttaaacttagtttttggtttgt
gctggagagaaaacagagtcaacagatggatttttttttcagtttaatga
gaaacgtgatcacattcatgtattaaagacaatgatttaagaaggaggaa
gcacatggtattggagaaagagctgctttcactgtctctgtgtaggtttg
taatctttgcactacctgggcctatacatggtactttcccagtaagttac
ctcaccagctttggtttctatattttattttgaaacaggctcttactatg
ttaccaaagctgcccttggaattgccatctccctacctagccctctaagt
acctgagattatgggtgcacaccacaatgtccagcctttggtgggagggc
tttagctagggcataccttccagagtacaggtggagaggctggtgtggcc
tgggcctatcagcagcaagaagccagctggcaaagaggtgggtggggaga
tttggtggtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_19553253_19554492
seq2: B6Ng01-067G07.b_45_1252 (reverse)

seq1  AAATAAATTTCACAGACCCACCCCTAAAATATGTTGTCTGTGTCTTTACA  50
      ||||||| |||||||| |||||| |||   ||  ||||||| ||| | ||
seq2  AAATAAA-TTCACAGA-CCACCCTTAA---ATTGTGTCTGT-TCTAT-CA  43

seq1  TTCCAATGTAACCACTTCATTGGT-ACAGAAAACCTGCTTTGCCAGGATT  99
      ||        ||| | |||||||| |||||||  |||  ||| || || |
seq2  TT--------ACC-CATCATTGGTCACAGAAA--CTGTCTTGGCAAGA-T  81

seq1  CAGTCCTTTAATGTTTGCTTTCCTCAC--TCCCATGTGAATAGAACAAGA  147
      |||||   |||   |||  ||||||||  ||||||||||   ||||||||
seq2  CAGTC---TAA--GTTGACTTCCTCACCTTCCCATGTGA--TGAACAAGA  124

seq1  GATATTTGCCTTTTAAAAATATATATACTATTCCCACATGAGTTTCTACT  197
      || ||||||  ||||||| ||||| ||||||| ||||||||| |||||||
seq2  GAAATTTGC--TTTAAAATTATAT-TACTATT-CCACATGAG-TTCTACT  169

seq1  TTCCTAACTAGTCTAATTCATAAATGTGGACTCCTTTTTTACTCTTCCCT  247
      ||||| |||||||||| |||||||  | |||||| ||||||||||| |||
seq2  TTCCT-ACTAGTCTAA-TCATAAA--TTGACTCC-TTTTTACTCTT-CCT  213

seq1  GGACTAAAGAGTTCAGACAATAGCATG-AGGATGTTCTTTCTTTATTGCT  296
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGACTAAAGAGTTCAGACAATAGCATGAAGGATGTTCTTTCTTTATTGCT  263

seq1  TGGTAAAAGC-ATAAAGTCTATAAACATAATGAGCTATTTAACTCTGGTG  345
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAAGCAATAAAGTCTATAAACATAATGAGCTATTTAACTCTGGTG  313

seq1  TACTCCCCCAATCATCTGTGATACAAGAGAACAAGCAGTTGTAGTTGTTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCCCAATCATCTGTGATACAAGAGAACAAGCAGTTGTAGTTGTTG  363

seq1  GCCAAAACTGAAGCTCTAAAGCTACAAAGATAGAGGCATAAAGAAGAGGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAACTGAAGCTCTAAAGCTACAAAGATAGAGGCATAAAGAAGAGGA  413

seq1  ACTAAGGAAATAGCATAGGGTATACCCCTAAGTTACCCATTGCAGGCCAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGAAATAGCATAGGGTATACCCCTAAGTTACCCATTGCAGGCCAG  463

seq1  GCTGAAACCTTGTTGTTCAACATGTGGTCCAGCAACAGCATCTTCTAAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAACCTTGTTGTTCAACATGTGGTCCAGCAACAGCATCTTCTAAAA  513

seq1  GCTTATTATATATCCATTATAGCAGCCCACACTCAGGCCTAATTACCTTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATTATATATCCATTATAGCAGCCCACACTCAGGCCTAATTACCTTA  563

seq1  AATATAAGTCTAGGGAATTCCTATGCACTTCAGAATGTGAGAAGACAGTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAGTCTAGGGAATTCCTATGCACTTCAGAATGTGAGAAGACAGTT  613

seq1  GGGTCTCACAGTAGAGACTGTAGTCTTGGTTAGCATAAGACTAAAGTCAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCACAGTAGAGACTGTAGTCTTGGTTAGCATAAGACTAAAGTCAG  663

seq1  GAAAACTCCAAATCTACAGACTGCTGAGGCTATAGAGTGAGTTTAAGGGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTCCAAATCTACAGACTGCTGAGGCTATAGAGTGAGTTTAAGGGC  713

seq1  AGAATAGTCCACTTAGCACGACTCTGACTGTGAAAGTGGAATGAAGGCTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGTCCACTTAGCACGACTCTGACTGTGAAAGTGGAATGAAGGCTA  763

seq1  GGGGTAGAGCTCAGAAATAGAGTTCTTGTTTAGCATGCTCATTGCACTAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAGAGCTCAGAAATAGAGTTCTTGTTTAGCATGCTCATTGCACTAA  813

seq1  GTATACTTTCTGCTATTGCATAGACACAAGGAATTTACTTTTAAAAATTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTTTCTGCTATTGCATAGACACAAGGAATTTACTTTTAAAAATTT  863

seq1  ATTTTTTCTGATTGCATTCTTGCAGCATGTTTTTCATGGATGACTCTCTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCTGATTGCATTCTTGCAGCATGTTTTTCATGGATGACTCTCTT  913

seq1  ACTCACGTTTCATAAGCGATGACTCTTAGCATTAGTATGATTATGTACTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACGTTTCATAAGCGATGACTCTTAGCATTAGTATGATTATGTACTG  963

seq1  CTATTAACCCAGAGGTTAAACACTTTCCTGTGTTGTTCTCCTGTCGCTAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAACCCAGAGGTTAAACACTTTCCTGTGTTGTTCTCCTGTCGCTAC  1013

seq1  CTGGGCAATATCACACATAACAACAGTGGTGACATTGGGCTCAGTTAATC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAATATCACACATAACAACAGTGGTGACATTGGGCTCAGTTAATC  1063

seq1  TGGAGATGACTTCACAGCTCAGTTACTACAAGTGGCTGGAAAAGAACATT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGACTTCACAGCTCAGTTACTACAAGTGGCTGGAAAAGAACATT  1113

seq1  TTCTCTATTACTCATATAGCCAGGTGTAGTCAGAAAGAAAACTGTGTCAT  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTATTACTCATATAGCCAGGTGTAGTCAGAAAGAAAACTGTGTCAT  1163

seq1  TATTTTTAGTCACACCTCTATTTTGAACCAAGTGCTATTGAATTC  1240
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAGTCACACCTCTATTTTGAACCAAGTGCTATTGAATTC  1208

seq1: chr5_19426168_19426736
seq2: B6Ng01-067G07.g_71_639

seq1  GAATTCACTAATGATCGCTGGATTTAGCAACAGAGACATCAAGAGAATAA  50
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAATGTTCGCTGGATTTAGCAACAGAGACATCAAGAGAATAA  50

seq1  GGAGAGAAAAGGAGACAGAGCACAGATAGTTCCCTTAAACTTAGTTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAAAAGGAGACAGAGCACAGATAGTTCCCTTAAACTTAGTTTTTG  100

seq1  GTTTGTGCTGGAGAGAAAACAGAGTCAACAGATGGATTTTTTTTTCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGCTGGAGAGAAAACAGAGTCAACAGATGGATTTTTTTTTCAGTT  150

seq1  TAATGAGAAACGTGATCACATTCATGTATTAAAGACAATGATTTAAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGAAACGTGATCACATTCATGTATTAAAGACAATGATTTAAGAAG  200

seq1  GAGGAAGCACATGGTATTGGAGAAAGAGCTGCTTTCACTGTCTCTGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGCACATGGTATTGGAGAAAGAGCTGCTTTCACTGTCTCTGTGTA  250

seq1  GGTTTGTAATCTTTGCACTACCTGGGCCTATACATGGTACTTTCCCAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTAATCTTTGCACTACCTGGGCCTATACATGGTACTTTCCCAGTA  300

seq1  AGTTACCTCACCAGCTTTGGTTTCTATATTTTATTTTGAAACAGGCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCTCACCAGCTTTGGTTTCTATATTTTATTTTGAAACAGGCTCTT  350

seq1  ACTATGTTACCAAAGCTGCCCTTGGAATTGCCATCTCCCTACCTAGCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTTACCAAAGCTGCCCTTGGAATTGCCATCTCCCTACCTAGCCCT  400

seq1  CTAAGTACCTGAGATTATGGGTGCACACCACAATGTCCAGCCTTTGGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTACCTGAGATTATGGGTGCACACCACAATGTCCAGCCTTTGGTGG  450

seq1  GAGGGCTTTAGCTAGGGCATACCTTCCAGAGTACAGGTGGAGAGGCTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTTTAGCTAGGGCATACCTTCCAGAGTACAGGTGGAGAGGCTGGT  500

seq1  GTGGCCTGGGCCTATCAGCAGCAAGAAGCCAGCTGGCAAAGAGGTGGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCTGGGCCTATCAGCAGCAAGAAGCCAGCTGGCAAAGAGGTGGGTG  550

seq1  GGGAGATTTGGTGGTGGGA  569
      |||||||||||||||||||
seq2  GGGAGATTTGGTGGTGGGA  569