BAC Information

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BAC

Clone NameB6Ng01-069F04
Chromosome5 (Build37)
Map Location 3,043,914 - 3,045,049
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC171266, LOC100040892
Downstream geneLOC667565, LOC624254, LOC100040940, LOC667585, LOC100034726, Cdk6, 5830415L20Rik, 1700109H08Rik, C030048B08Rik, Pex1, Gatad1, 4930511M11Rik, Ankib1, Krit1, 4932412H11Rik, LOC100041009, LOC667617, Mterf, Akap9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069F04.bB6Ng01-069F04.g
ACCDH887667DH887668
length1,2621,116
definitionDH887667|Mus musculus domesticus DNA, BAC clone: B6Ng01-069F04, 5' end.DH887668|Mus musculus domesticus DNA, BAC clone: B6Ng01-069F04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctactgaattccaagtttgtcagcttcaaggattttctgggact
ttggaacactggcaaaggcttagctatgtcagaattcaatctttaaaggc
acttataataaaataatactaaaagagagcacgtggatccatacaccaga
ctaacacggggatagggtatgagtatacaggttatgagaatgccaaggtt
ccaggaggttgagtttccttgaaactctttgcctcgtgagtgcttccagg
cctctcggcctgccaagcagacttcactgaagtgtgcgtagcattctctc
cctttcatttttatttttcagctaaagttccagaatgtccagcttcatca
tagctacagatctcagaagtactctaaagatgagtgtaaacacaatgatt
actaataaaataatgccaataataatagcaagtaggattatatattgtac
ccaatctatgggattcaatgcacttaggttatttttttaaatctctggct
aatttatcaatgttccaagtgtccaagtgatttttgctaatatctgaaat
ttctgcctttctagctttaatatttgctatattctgtcctattgctaaga
ctactgcttctaagacattaacctttacctccaattttttatctataata
tgttgctctgacaaagctatggaaatatttctatgcttatcattaacaaa
atgagcagtatgtagctgctgaactacggctgtagtatataccttttcaa
agtttgcattcccagatttttaaaccaaggatcatttcttaactctaata
ggcagcaaaccataagcaggtctttttaacaaaatcataacagcagattc
cttatctaaattagtatttacacaattagttaattgacaagaattacaat
gaatatgaaaagacttgccaaaggttggtgttcttaactctaaaattatc
taacaatatagcctacaaggtaagtacatagctttacagctataagggga
gtgggctgaatggccaatcagtgtctttgatgaatcttgacaatactctg
tagcagtcctctggcctcacggagtcatcatttagtttcccagttgaccc
aggttgctctcttgctgaaccatggtggagaatggagttctcatctgttg
catggctgctcctgatctctttctggggcctaatagctcttgaacggtcg
gaactcggaatccagagcgtaccaaacatttgagtcatcatctcgtatac
atcgatgaatac
gaattctgggtaaacacaggactggactttgcctccctaggtactatggt
cagatgctggacatggcctgctcatcaccgccatctttgctgtaaccatt
tctgtgtttataaatgcattatctctgaaatttttcatattgatgtttta
ttttgtctaattcttttgtccaccttgtcctctggccatggcattttaat
tttcttttgccttttaattttttctaatcatggaagatatcagaaaatat
tcaaataatcaggaagtatacagttgttataaagcaatttgaaaattaaa
aacttatgtactaattaaggagtgtttttagacaattgtatagatataaa
atcaaatttagggatgaaaaagaaaaaagaaaagaaagagcaatttgcaa
attcttctagaataacaacaaaaaaattcatgataccgaaaactattctc
aacaatataagaacctctggtggaatcaccatccctgacctcaagcttta
ctagagagaaatcataataaaaactggatggtactggtacagtgaaaggc
aggtagatcaatggaatgaaattgaagacccagaaatgagcctatatatc
tatggtcacttgatctttgacaacggtgctaaaaccatccaatggaaaaa
aagacagcattttcaacaattggtgctggtttaactggcagtcagcatgt
agaagaatgaaaatggacctttttttttttaagtctgataaattccttca
attatcttctctaaaactggcttttgaatttccttggccttattgttcac
gatggagttttcctttctcttttgtgatagatagctgtgctatgtctgta
ttggaaattattaactttagaacttgcaacacaccatttcatgttctact
gtattagaagttctcttgaatattgattgcttttcttaaagactagccca
tgtatgtgattttctgtttctcttgttcatttttctaaaacactgctttg
tttgatgtaatatgttttataatagaagtggagagatcattcctttctgc
tgcttgaaatatccacggatctgcattaattggattcatccaaactggaa
agtttctcttatgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_3043914_3045049
seq2: B6Ng01-069F04.g_68_1183

seq1  GAATTCTGGGTAAACACAGGACTGGACTTTGCCTCCCTAGGTACTATGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTAAACACAGGACTGGACTTTGCCTCCCTAGGTACTATGGT  50

seq1  CAGATGCTGGACATGGCCTGCTCATCACCGCCATCTTTGCTGTAACCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCTGGACATGGCCTGCTCATCACCGCCATCTTTGCTGTAACCATT  100

seq1  TCTGTGTTTATAAATGCATTATCTCTGAAATTTTTCATATTGATGTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTTATAAATGCATTATCTCTGAAATTTTTCATATTGATGTTTTA  150

seq1  TTTTGTCTAATTCTTTTGTCCACCTTGTCCTCTGGCCATGGCATTTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTAATTCTTTTGTCCACCTTGTCCTCTGGCCATGGCATTTTAAT  200

seq1  TTTCTTTTGCCTTTTAATTTTTTCTAATCATGGAAGATATCAGAAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGCCTTTTAATTTTTTCTAATCATGGAAGATATCAGAAAATAT  250

seq1  TCAAATAATCAGGAAGTATACAGTTGTTATAAAGCAATTTGAAAATTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAATCAGGAAGTATACAGTTGTTATAAAGCAATTTGAAAATTAAA  300

seq1  AACTTATGTACTAATTAAGGAGTGTTTTTAGACAATTGTATAGATATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATGTACTAATTAAGGAGTGTTTTTAGACAATTGTATAGATATAAA  350

seq1  ATCAAATTTAGGGATGAAAAAGAAAAAAGAAAAGAAAGAGCAATTTGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTTAGGGATGAAAAAGAAAAAAGAAAAGAAAGAGCAATTTGCAA  400

seq1  ATTCTTCTAGAATAACAACAAAAAAATTCATGATACCGAAAACTATTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTAGAATAACAACAAAAAAATTCATGATACCGAAAACTATTCTC  450

seq1  AACAATATAAGAACCTCTGGTGGAATCACCATCCCTGACCTCAAGCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATAAGAACCTCTGGTGGAATCACCATCCCTGACCTCAAGCTTTA  500

seq1  CTAGAGAGAAATCATAATAAAAACTGGATGGTACTGGTACAGTGAAAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAGAAATCATAATAAAAACTGGATGGTACTGGTACAGTGAAAGGC  550

seq1  AGGTAGATCAATGGAATGAAATTGAAGACCCAGAAATGAGCCTATATATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGATCAATGGAATGAAATTGAAGACCCAGAAATGAGCCTATATATC  600

seq1  TATGGTCACTTGATCTTTGACAACGGTGCTAAAACCATCCAATGGAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCACTTGATCTTTGACAACGGTGCTAAAACCATCCAATGGAAAAA  650

seq1  AAGACAGCATTTTCAACAATTGGTGCTGGTTTAACTGGCAGTCAGCATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGCATTTTCAACAATTGGTGCTGGTTTAACTGGCAGTCAGCATGT  700

seq1  AGAAGAATGAAAATGGACCTTTTTTTTTTTAAGTCTGATAAATTCCTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAATGAAAATGGACCTTTTTTTTTTTAAGTCTGATAAATTCCTTCA  750

seq1  ATTATCTTCTCTAAAACTGGCTTTTGAATTTCCTTGGCCTTATTGTTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTCTCTAAAACTGGCTTTTGAATTTCCTTGGCCTTATTGTTCAC  800

seq1  GATGGAGTTTTCCTTTCTCTTTTGTGATAGATAGCTGTGCTATGTCTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGTTTTCCTTTCTCTTTTGTGATAGATAGCTGTGCTATGTCTGTA  850

seq1  TTGGAAATTATTAACTTTAAGAACTTGCAACACACCATTTCATGTTCTAC  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTGGAAATTATTAACTTT-AGAACTTGCAACACACCATTTCATGTTCTAC  899

seq1  TGTATTAGAAAGTTTCTCTTGAATATTGAATTGCTTTTCTTATAGACTAG  950
      ||||||||||   ||||||||||||||| ||||||||||||| |||||||
seq2  TGTATTAGAA--GTTCTCTTGAATATTG-ATTGCTTTTCTTAAAGACTAG  946

seq1  CCCATGTATGTGATTTTCTGTTTCTC-TGTTCATGTTTCTAATACACTGC  999
      |||||||||||||||||||||||||| ||||||| ||||||| |||||||
seq2  CCCATGTATGTGATTTTCTGTTTCTCTTGTTCATTTTTCTAAAACACTGC  996

seq1  TTTGGTTTGTATGTTAATATGTTTTATAATAGAAGTGGAGAGATTCATTT  1049
      ||| ||||| ||| ||||||||||||||||||||||||||||| ||||| 
seq2  TTT-GTTTG-ATG-TAATATGTTTTATAATAGAAGTGGAGAGA-TCATTC  1042

seq1  CTCTTCTTGTCTGCTTGATATTCTAACTGAATCCTGCATTTATATTGGCA  1099
      || ||||   |||||||| ||    || ||   |||||||   |||||  
seq2  CT-TTCT--GCTGCTTGAAATATCCACGGA--TCTGCATT--AATTGG--  1083

seq1  TTTTATCCCTAACCATGAGAAATTTTCTCTTATGATT  1136
       || ||||  || | || |||| ||||||||||||||
seq2  ATTCATCC--AAAC-TG-GAAAGTTTCTCTTATGATT  1116