BAC Information

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BAC

Clone NameB6Ng01-069P12
Chromosome5 (Build37)
Map Location 81,656,960 - 81,657,300
singlet/doubletsinglet
Overlap geneLphn3
Upstream geneLOC100039506, LOC100039384
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069P12.bB6Ng01-069P12.g
ACCDH888114DH888115
length6341,158
definitionDH888114|Mus musculus domesticus DNA, BAC clone: B6Ng01-069P12, 5' end.DH888115|Mus musculus domesticus DNA, BAC clone: B6Ng01-069P12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggttacaaatatgacatttataattttaaataagaattatggc
atctttagtttttctttttttgctgagcaaatgtaactcaggatttcaag
acattctcttccttacctttgagcacacacacacacatatatatatatat
atatatatatatatatatatatatatatatatgtatatatatatatatac
atacatatatatatatatatattttcctcaattacttttccaatgctatc
caaaaagtcccccataccctctcccccacccccctacccaccctatctca
ctttttggcactggcgttcccctgtactggggcatattaggtttgcgtgt
gcgagggggctcgggtgggtgtgtgggcgtacgaggccatgtgtatgatg
cgtatgcatctagaatcaagagctccggggtactgtatagttcatattgt
tgttccacctatagggttgcagttccctatagctccttgggtattctcta
gctcctccataggagccgtgtgacccatccaataactgactgtgatcatc
cacttctgtgttgctaggtctctgcatagtctcacaagagagagctatac
tgttccttcagcgaatcttgctagtgtatgcaat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctaggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgttgcttgtgagactatgccggggtctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagaagaaagtattcaaggagctaagggatcttcacccta
tagttggacacatatgaactaaccagtaccctgagctctgactctagctg
catatgtatcaaagatgctagtcgcatccttgaagagagcccatggaccc
tgactttgtgtgctcggtcagggaacgccaagtcaaagggggggaagtgg
gtgggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_81656960_81657300
seq2: B6Ng01-069P12.b_349_682

seq1  CTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGT  50
      ||||||||| ||||||||||||||||||||||||||| | ||||||  ||
seq2  CTTTTTGGCACTGGCGTTCCCCTGTACTGGGGCATATTAGGTTTGCGTGT  50

seq1  CCAATGGGCCTCTCTTTGCAGTGATGACCGACTAGGCCATCT-TTTGATA  99
       | | ||| |||   | |  |||  | |  || ||||||| | | |||| 
seq2  GCGAGGGGGCTCGGGTGGGTGTGTGGGCGTACGAGGCCATGTGTATGATG  100

seq1  CATATGCAGCTAAAGACAAGAGCTCCCGGGTACTGGTTAGTTCATATTGT  149
      | |||||| ||| |  |||||||||| ||||||||  |||||||||||||
seq2  CGTATGCATCTAGAATCAAGAGCTCCGGGGTACTGTATAGTTCATATTGT  150

seq1  TGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTTGGGTAATTTCTC  199
      |||||||||||||||||||||||||||| ||||||||||||||  |||||
seq2  TGTTCCACCTATAGGGTTGCAGTTCCCTATAGCTCCTTGGGTA--TTCTC  198

seq1  TAGCTCCTCCATTAGGGGCCGTGTGACCCATCCAATAGCTGACTGTGATC  249
      ||||||||||| |||| |||||||||||||||||||| ||||||||||||
seq2  TAGCTCCTCCA-TAGGAGCCGTGTGACCCATCCAATAACTGACTGTGATC  247

seq1  ATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGAGAGCT  299
      ||||||||||||| |||||||| | | |||||||||||||||||||||||
seq2  ATCCACTTCTGTG-TTGCTAGGTCTCTGCATAGTCTCACAAGAGAGAGCT  296

seq1  ATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAAT  341
      ||| ||  || | ||||||  |||||||||||||||||||||
seq2  ATA-CT--GTTCCTTCAGC-GAATCTTGCTAGTGTATGCAAT  334