BAC Information

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BAC

Clone NameB6Ng01-071A14
Chromosome5 (Build37)
Map Location 122,700,990 - 122,701,769
singlet/doubletsinglet
Overlap geneTect1
Upstream geneEG545802, AU042671, Trafd1, C330023M02Rik, Erp29, Tmem116, Adam1b, Adam1a, Mapkapk5, Aldh2, 9330129D05Rik, Acad10, Brap, Atxn2, Sh2b3, A230106M15Rik, Cutl2, LOC100042693, Myl2, Ccdc63, Ppp1cc, Hvcn1
Downstream genePptc7, Rad9b, Vps29, 1500011H22Rik, Atpbd1c, Arpc3, Anapc7, Atp2a2, Ift81, P2rx7, P2rx4, Camkk2, Anapc5, Rnf34, Fbxl10, LOC100039895, Tmem142a, Morn3, LOC623672, BC022593, Rhof, 4932422M17Rik, Setd1b, Hpd, Psmd9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071A14.bB6Ng01-071A14.g
ACCDH888852DH888853
length1,230780
definitionDH888852|Mus musculus domesticus DNA, BAC clone: B6Ng01-071A14, 5' end.DH888853|Mus musculus domesticus DNA, BAC clone: B6Ng01-071A14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacacccctaagccccttaccccataaaaacccctagcttctga
gcctcatggtcgaatccactgtctcctgcgtgagatacgtttcgacccgg
aactccgccattaaactacctcgtgtttttacatcaaggcgttgtgttct
gtttgtgattcttgggtgcactccgaatcgggagttaagtgggagtttcc
ccactaggttctatcagtacacagacaggcagacaaacactcaatgataa
aatgcatcaggtgctggagagagcgttcacttgctgctctttcagaggac
tcaggctaggttcccagcatccacaggatggttcattaattccagtgcca
ggaaatccagtgttctcttttgatctctgtgggcaacacacacacacaca
cacggtacgcacaaacacacatatacacatgcaggcagtacaatcataaa
cataaaagttaaaataagtaaacctaaaatataataaatgtttttagaaa
aaatgtttgctgttttttttttctacatttggaatatttcataattaaac
ccaagtctagccaactgtagtggcccatgcctctaaacccagaggcaaga
tgcttgcaagttcaaggacagcctagggctacacggtaagtttcagacca
gcctggtgtatgtatagaaagacccacgtcagaaagaaaacagaccaggc
atgatgacaaactcctttagtcgcagcacttgggagacagaagcagatgg
atctctgtggtttcaaggcctgcctaactaagtaagttctaggacagcca
gggatacatagtgagaccctctttcaaaacaagcaaacaagacacatccc
acatctttttttaaaaagatttatttattatatgtaagtacactgtagct
gtcttcagacactccagaagagggagtcagatcttcattacagatggctg
tgagccaccatgtggttgctgggatttgaactcaggacctcccgaccact
gagccacctctccaacccatatcccacatctttaccagtagccacataat
ggaaatgagtgtgggcaactaatggatagtcaaatgaacatgtacccgct
gaagaaaagaggataaccgatcatgaataagaaaactgtctcaattattc
cagcctaaataaattggcacttggtagagctaatgaagcactggcatgcc
agcttccatctgtgtgaagtatctaaagca
gaattcaaacttactagaactcaggcctggaggaccaacttagaaaacag
gagggactaaggagggtaaaggactctgaatatggcagcccaggtgcctc
accctcccacaacactaataagaacttagaaaccaggaggggccttggac
attatcccatggttgagtcacctcttcctctcttcagccctccctccctg
tcatgtaggacagagcctcgctcactctgttccagctccatcaccatctc
taaggaacatggccctttccttgggacttgggtaccccacccagcttgct
gttagaccattcctgatagcctctgtctttaggtagacggggaagcccac
tttttatggtgttggtaggactggactgttaacgtggcgctggacgatct
ccaacgtgagcagtcactgaagacctggccttgctcagccgctctcaaga
caaatgaaggaaattttaaaactgaatggaaacgagacacagccgagctc
cacacaaacttcctaaagatcactgagcagccaccgataccacagggcca
gagaacacaacaggccaggccaagtggagatcactctacatcttaaaggg
acagtcagttctgcatccagatgagtcttaccctcagaatggcagggctg
ctgtaatgagccatgctgagggcttccattccttcacactgttctatgtc
cacccttcggctgcattcgaaggcctggctcaccaggaacgctggaaatg
gtaacatccagggggtgggggtgggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_122700990_122701769
seq2: B6Ng01-071A14.g_66_845

seq1  GAATTCAAACTTACTAGAACTCAGGCCTGGAGGACCAACTTAGAAAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTTACTAGAACTCAGGCCTGGAGGACCAACTTAGAAAACAG  50

seq1  GAGGGACTAAGGAGGGTAAAGGACTCTGAATATGGCAGCCCAGGTGCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACTAAGGAGGGTAAAGGACTCTGAATATGGCAGCCCAGGTGCCTC  100

seq1  ACCCTCCCACAACACTAATAAGAACTTAGAAACCAGGAGGGGCCTTGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCCACAACACTAATAAGAACTTAGAAACCAGGAGGGGCCTTGGAC  150

seq1  ATTATCCCATGGTTGAGTCACCTCTTCCTCTCTTCAGCCCTCCCTCCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCCATGGTTGAGTCACCTCTTCCTCTCTTCAGCCCTCCCTCCCTG  200

seq1  TCATGTAGGACAGAGCCTCGCTCACTCTGTTCCAGCTCCATCACCATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAGGACAGAGCCTCGCTCACTCTGTTCCAGCTCCATCACCATCTC  250

seq1  TAAGGAACATGGCCCTTTCCTTGGGACTTGGGTACCCCACCCAGCTTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAACATGGCCCTTTCCTTGGGACTTGGGTACCCCACCCAGCTTGCT  300

seq1  GTTAGACCATTCCTGATAGCCTCTGTCTTTAGGTAGACGGGGAAGCCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGACCATTCCTGATAGCCTCTGTCTTTAGGTAGACGGGGAAGCCCAC  350

seq1  TTTTTATGGTGTTGGTAGGACTGGACTGTTAACGTGGCGCTGGACGATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGGTGTTGGTAGGACTGGACTGTTAACGTGGCGCTGGACGATCT  400

seq1  CCAACGTGAGCAGTCACTGAAGACCTGGCCTTGCTCAGCCGCTCTCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACGTGAGCAGTCACTGAAGACCTGGCCTTGCTCAGCCGCTCTCAAGA  450

seq1  CAAATGAAGGAAATTTTAAAACTGAATGGAAACGAGACACAGCCGAGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAAGGAAATTTTAAAACTGAATGGAAACGAGACACAGCCGAGCTC  500

seq1  CACACAAACTTCCTAAAGATCACTGAGCAGCCACCGATACCACAGGGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAACTTCCTAAAGATCACTGAGCAGCCACCGATACCACAGGGCCA  550

seq1  GAGAACACAACAGGCCAGGCCAAGTGGAGATCACTCTACATCTTAAAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACACAACAGGCCAGGCCAAGTGGAGATCACTCTACATCTTAAAGGG  600

seq1  ACAGTCAGTTCTGCATCCAGATGAGTCTTACCCTCAGAATGGCAGGGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAGTTCTGCATCCAGATGAGTCTTACCCTCAGAATGGCAGGGCTG  650

seq1  CTGTAATGAGCCATGCTGAGGGCTTCCATTCCTTCACACTGTTCTATGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATGAGCCATGCTGAGGGCTTCCATTCCTTCACACTGTTCTATGTC  700

seq1  CACCCTTCGGCTGCATTCGAAGGCCTGGCTCACCAGGAACGCTGGAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTCGGCTGCATTCGAAGGCCTGGCTCACCAGGAACGCTGGAAATG  750

seq1  GTAACATCCAGGGGGTGGGGGTGGGGGAGG  780
      ||||||||||||||||||||||||||||||
seq2  GTAACATCCAGGGGGTGGGGGTGGGGGAGG  780