BAC Information

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BAC

Clone NameB6Ng01-073M02
Chromosome5 (Build37)
Map Location 132,784,515 - 132,960,910
singlet/doubletdoublet
Overlap geneAuts2
Upstream gene4930563F08Rik
Downstream geneLOC100039731
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073M02.bB6Ng01-073M02.g
ACCDH890790DH890791
length1,085949
definitionDH890790|Mus musculus domesticus DNA, BAC clone: B6Ng01-073M02, 5' end.DH890791|Mus musculus domesticus DNA, BAC clone: B6Ng01-073M02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,959,824 - 132,960,910)(132,784,515 - 132,785,463)
sequence
gaattcatgaactctcagtgagcaggattacccgcacaggaccggagcct
attaacatcccatcctcttctctaatagcccatgctggcctggaactgac
tgctgtgtagctgatgttgaccttgcccttctgatcgggatgcctgtgtc
tctcaagtgctgaggttacaggagtgcaccatcacaccctgcagatgtgg
tgccgaaggttgaacccaggcctgtgtgtgctggtgaagcgctctcctaa
ccgagtcacatctgtggccctgttcttctgtttcacctcactgtgcagag
gtagatagcagctcttgggttccctacaacccggggagataagccccctt
ttccaggcacttgaggtaacagtgcgggaagactgtggttgccgagagtc
tcctgccacagttcaggaacactaacctatctgggaagattcctggatgt
gcagccaggtcttttttttccctgacctcagaaaattgagaggagtaggc
tgaaagctggaaaagattgattggtgagctacaaaagactgaaaagacat
tttcttgaaggtgaacttgccttatcaaaatattatgaaaattccaaaga
aaagctgagctgggttaccaagaaaatgccaggagggaaaaatcttaata
tatagaatttgaaaatggaaggctagtctttttgacagtttcccatttca
caagttgaggatgttacaggatatggggaaatgtttgaaagctcctctgg
ctgtaattcctgactgtggtctccttccctcagtcctgtaccttggtcac
ctgatattgctggtagctcatctcctacaacctgccagtacacataaacc
atttataaccctgtccatgatactgaatggtctgatatcttccttataaa
cgtgctatggcctagggctcatatggagggagagaaacttttaataaaac
caacactcagttttggggctccttttaaatttttattgcagtgtgaatag
ggatatgtcacttgcctatatggtgggccaatgccatgtggtgtgtttgg
aggtcagaacgaccactttgagcactgggttcttt
gaattctggtttctttagaaaacacagaaataatacaagaacactttttc
atttgactcccaggtgcgaggacatcatgctgctttggactgtccacagc
agcggactgtgatttgcctcatgctctagcagtagcatggtgttgctagc
tgcagttaatttccaagattgtgtgacatttggaattctgggaagttttc
aaaggatacatgaatgacagagacctgacaggcatggtaagtgattgttg
gccacagtctattagtagccttagtcaaagaagaaacaaacggaaacaga
ttagatgcaaggattttcctagttcctctctctcctctgtccttgtttct
ctcctatctagtgttgggggtaaatcaggggcagggatgaaggatgggaa
aaagaaaaacccacaaagcagcaaagcccagctacctgtttctctgatcc
tcagtcattaacattagtccagcattatcccaagtcatcaacatcctgtt
cactcaacaagtatttactgagaactggccacttcccaggcactgcacaa
catatgccatatttcttaaaaagataccatttccttcactcagattgtta
ccatctttactaagagagctcttaaatcttgacctctcatatatgcctac
tgaagaactgtgctatgaatacaaacccataggaagcccctacctatgag
taatgaacactcatactctaccatctatacccctactggatttggtaccc
aaaatcctgtatctttaatgcacttttcaaatatcttgatgtctcattcc
ttatttaacttacacatcagatgcatattaagattgcctcttataggact
atgcagagtcgaagcttaacagtcttatgcctcacacctcgtacgggcat
aaatcacacgtataaagaaaggtaggcgtgtgtgtgtgtgggggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_132959824_132960910
seq2: B6Ng01-073M02.b_42_1126 (reverse)

seq1  AAAGAACCAACTGCTCAAAGTTGTC-CTCTGACCTCCAAACACA-CACAT  48
      |||||||| | |||||||||| |||  ||||||||||||||||| |||||
seq2  AAAGAACCCAGTGCTCAAAGTGGTCGTTCTGACCTCCAAACACACCACAT  50

seq1  GGCATTTGCCCACCCATAT-GCCAAATGGACAAATCCCTATACACACTGC  97
      |||||| ||||| |||||| | ||| | |||| |||||||| ||||||||
seq2  GGCATTGGCCCA-CCATATAGGCAAGT-GACATATCCCTATTCACACTGC  98

seq1  AATAAAAATTTTAAAAAGAGCCCCAAAACATGAGTGTTGGGTTTTCTTAA  147
      |||||||| ||||||| |||||||||||| |||||||| |||||| ||||
seq2  AATAAAAA-TTTAAAAGGAGCCCCAAAAC-TGAGTGTT-GGTTTTATTAA  145

seq1  ATGTCTCTTCTCCCTCCATATGAGCCCTAGGCCATAG-ACGTTTATGACG  196
      | || || ||||||||||||||||||||||||||||| |||||||| | |
seq2  AAGTTTC-TCTCCCTCCATATGAGCCCTAGGCCATAGCACGTTTATAAGG  194

seq1  AAGCTATCAGACCATTCACTATCATGGACAGGGTTATAAATGGTTTATGT  246
      ||| |||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGATATCAGACCATTCAGTATCATGGACAGGGTTATAAATGGTTTATGT  244

seq1  GTACTGGCAGGTTGTAGGAGATGAGCTACCAGCAATACCAGGTGACCAAG  296
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTACTGGCAGGTTGTAGGAGATGAGCTACCAGCAATATCAGGTGACCAAG  294

seq1  GTACAGGACTGAGGGAAGGAGACCACAGTCAGGAATTACAGCCAGAGGAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGACTGAGGGAAGGAGACCACAGTCAGGAATTACAGCCAGAGGAG  344

seq1  CTTTCAAACATTTCCCCATATCCTGTAACATCCTCAACTTGTGAAATGGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAACATTTCCCCATATCCTGTAACATCCTCAACTTGTGAAATGGG  394

seq1  AAACTGTCAAAAAGACTAGCCTTCCATTTTCAAATTCTATATATTAAGAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTCAAAAAGACTAGCCTTCCATTTTCAAATTCTATATATTAAGAT  444

seq1  TTTTCCCTCCTGGCATTTTCTTGGTAACCCAGCTCAGCTTTTCTTTGGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTCCTGGCATTTTCTTGGTAACCCAGCTCAGCTTTTCTTTGGAA  494

seq1  TTTTCATAATATTTTGATAAGGCAAGTTCACCTTCAAGAAAATGTCTTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATAATATTTTGATAAGGCAAGTTCACCTTCAAGAAAATGTCTTTT  544

seq1  CAGTCTTTTGTAGCTCACCAATCAATCTTTTCCAGCTTTCAGCCTACTCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTTGTAGCTCACCAATCAATCTTTTCCAGCTTTCAGCCTACTCC  594

seq1  TCTCAATTTTCCGAGGTCAGGGAAAAAAAAGACCTGGCTGCACATCCAGG  646
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATTTTCTGAGGTCAGGGAAAAAAAAGACCTGGCTGCACATCCAGG  644

seq1  AATCTTCCCAGATAGGCTAGTGTTCCTGAACTGTGGCAGGAGACTCTCGG  696
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATCTTCCCAGATAGGTTAGTGTTCCTGAACTGTGGCAGGAGACTCTCGG  694

seq1  CAACCACAGTCTTCCCGCACTGTTACCTCAAGTGCCTGGAAAAGGGGGCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACAGTCTTCCCGCACTGTTACCTCAAGTGCCTGGAAAAGGGGGCT  744

seq1  TATCTCCCCGGGTTGTAGGGAACCCAAGAGCTGCTATCTACCTCTGCACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCCCGGGTTGTAGGGAACCCAAGAGCTGCTATCTACCTCTGCACA  794

seq1  GTGAGGTGAAACAGAAGAACAGGGCCACAGATGTGACTCGGTTAGGAGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTGAAACAGAAGAACAGGGCCACAGATGTGACTCGGTTAGGAGAG  844

seq1  CGCTTCACCAGCACACACAGGCCTGGGTTCAACCTTCGGCACCACATCTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTCACCAGCACACACAGGCCTGGGTTCAACCTTCGGCACCACATCTG  894

seq1  CAGGGTGTGATGGTGCACTCCTGTAACCTCAGCACTTGAGAGACACAGGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTGTGATGGTGCACTCCTGTAACCTCAGCACTTGAGAGACACAGGC  944

seq1  ATGCCGATCAGAAGGGCAAGGTCAACATCAGCTACACAGCAGTCAGTTCC  996
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCGATCAGAAGGGCAAGGTCAACATCAGCTACACAGCAGTCAGTTCC  994

seq1  AGGCCAGCATGGGCTCTTAGAGAAGAGGATGGGATGTTAATAGGCTCCGG  1046
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCATGGGCTATTAGAGAAGAGGATGGGATGTTAATAGGCTCCGG  1044

seq1  TCCTGTGCGGGTAATCATGCTCACTGAGAGTTCATGAATTC  1087
      |||||||||||||||| ||||||||||||||||||||||||
seq2  TCCTGTGCGGGTAATCCTGCTCACTGAGAGTTCATGAATTC  1085

seq1: chr5_132784515_132785463
seq2: B6Ng01-073M02.g_66_1013

seq1  GAATTCTGGTTTCTTTAGAAAACACAGAAATAATACAAGAACACGTTTTC  50
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAATTCTGGTTTCTTTAGAAAACACAGAAATAATACAAGAACACTTTTTC  50

seq1  ATTTGACTCCCAGGTGCGAGGACATCAGGCTGCTTTGGACTGTCCACAGC  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATTTGACTCCCAGGTGCGAGGACATCATGCTGCTTTGGACTGTCCACAGC  100

seq1  AGCGGACTGTGATTTGCCTCATGCTCTAGCAGTAGCATGGTGTTGCTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGACTGTGATTTGCCTCATGCTCTAGCAGTAGCATGGTGTTGCTAGC  150

seq1  TGCAGTTAATTTCCAAGATTGTGTGACATTTGGAATTCTGGGAAGTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTAATTTCCAAGATTGTGTGACATTTGGAATTCTGGGAAGTTTTC  200

seq1  AAAGGATACATGAATGAGAGAGACCTGACAGGCATGGTAAGTGATTGTTG  250
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAAGGATACATGAATGACAGAGACCTGACAGGCATGGTAAGTGATTGTTG  250

seq1  GCCACAGTCTATTAGTAGCCTTAGTCAAAGAAGAAACAAACGGAAACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGTCTATTAGTAGCCTTAGTCAAAGAAGAAACAAACGGAAACAGA  300

seq1  TTAGATGCAAGGATTTTCCTAGTTCCTCTCTCTCCTCTGTCCTTGTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGCAAGGATTTTCCTAGTTCCTCTCTCTCCTCTGTCCTTGTTTCT  350

seq1  CTCCTATCTAGTGTTGGGGGTAAATCAGGGGCAGGGATGAAGGATGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTATCTAGTGTTGGGGGTAAATCAGGGGCAGGGATGAAGGATGGGAA  400

seq1  AAAGAAGAACCCACAAAGCAGCAAAGCCCAGCTACCTGTTTCTCTGATCC  450
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAACCCACAAAGCAGCAAAGCCCAGCTACCTGTTTCTCTGATCC  450

seq1  TCAGTCATTAACATTAGTCCAGCATTATCCCAAGTCATCAACATCCTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCATTAACATTAGTCCAGCATTATCCCAAGTCATCAACATCCTGTT  500

seq1  CACTCAACAAGTATTTACTGAGAACTGGCCACTTCCCAGGCACTGCACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAACAAGTATTTACTGAGAACTGGCCACTTCCCAGGCACTGCACAA  550

seq1  CATATGCCATATTTCTTAAAAAGATACCATTTCCTTCACTCAGATTGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCCATATTTCTTAAAAAGATACCATTTCCTTCACTCAGATTGTTA  600

seq1  CCATCTTTACTAAGAGAGCTCTTAAATCTTGACCTCTCATATATGCCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTTACTAAGAGAGCTCTTAAATCTTGACCTCTCATATATGCCTAC  650

seq1  TGAAGAACTGTGCTATGAATACAAACCCATAGGAAGCCCCTACCTAGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  TGAAGAACTGTGCTATGAATACAAACCCATAGGAAGCCCCTACCTATGAG  700

seq1  TAATGAACACTCATACTCTACCATCAATACCCCTACTGGATTTGGTACCC  750
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAATGAACACTCATACTCTACCATCTATACCCCTACTGGATTTGGTACCC  750

seq1  AAAATCCTGTTTCTTTAATGCACTTTTCAAATATCTTGATGTCTCATTCC  800
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCTGTATCTTTAATGCACTTTTCAAATATCTTGATGTCTCATTCC  800

seq1  TTATTTAACTTACACATCAGATGCATATTAAGATTGCCTCTTATTGGACT  850
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTATTTAACTTACACATCAGATGCATATTAAGATTGCCTCTTATAGGACT  850

seq1  ATGCAAGAGTCGAAGCTTAACAGTCTTATGCCACACACCACATACAGGCG  900
      |||| ||||||||||||||||||||||||||| |||||| | ||| ||| 
seq2  ATGC-AGAGTCGAAGCTTAACAGTCTTATGCCTCACACCTCGTACGGGCA  899

seq1  TAGATCACACTTTTAAAGAAAGGTAGGTGTGTGTGTGTGTGGGGGGGGG  949
      || ||||||| | |||||||||||||| |||||||||||||||||||||
seq2  TAAATCACACGTATAAAGAAAGGTAGGCGTGTGTGTGTGTGGGGGGGGG  948