BAC Information

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BAC

Clone NameB6Ng01-074D12
Chromosome5 (Build37)
Map Location 70,499,892 - 70,500,911
singlet/doubletsinglet
Overlap genenone
Upstream geneKctd8, LOC545756, Yipf7, Guf1, Gnpda2
Downstream geneGabrg1, Gabra2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074D12.bB6Ng01-074D12.g
ACCDH891131DH891132
length1,0191,135
definitionDH891131|Mus musculus domesticus DNA, BAC clone: B6Ng01-074D12, 5' end.DH891132|Mus musculus domesticus DNA, BAC clone: B6Ng01-074D12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatctgtattcagaattcaaaacttcttgtgcttctcttttaat
tacgttatttgtataaacatacatgtatgaaggttggaggacagctcata
agaattggttgcctccttcctccatattaattccataaacttaacttaga
gattcatgctaagtagcaagggccttttctcactgagccacatagtcacc
tctttactgtgcttcttggtagatgcttctgatatgttggcctgtttagc
actggcaacacattatataaatgatataaaacaattttataaacaatttt
taaaacaatttctgtattatttttatatatgatattttaactttgctttt
ccagataaaaaatttaaatttattgagatggctcaggagtacaggtgtta
gtttccaaagttgaatgatctcagtttgattgatagaacctattcacatc
ataggaagaaggaaatgaaagttatcctctgcctcccaccaatatggctt
gacaaaccatgtgccctcacacatgaatcaatatacacacaccacacacc
cacatatacatacacaatccctaacattatataataaaattatgtaaatg
tttataaatatatagaatgttgtggaagataattagtatctttaattttt
ctatagtattatttgttctttattataagtctgttgtcttcaactacaaa
tggatttataaaaaaaaaagaaaactcagcataaaactagatacattgaa
actggcaaaacagaaaactgctgtatccataaagtacttgacccaggaaa
agaatttctgaacaggacaccatcattacaggtactaacatcaacaatca
ataaataagaactcatgagactaagaaggttctgcacaacaatgaacacc
atcatttagacaaaatgacatggtgttagatgccctagtgtaggggaatg
ccaggaaagagacaggagtggaatagcacccttatagaggcagggagggg
caggggggagggggaggtt
gaattccttatttaggtctgagccccatttttaaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatatatatatatattgga
ttgtagtcccctatctgatttaggattggaaaacatcctttcccaatctg
ttggtggtctttttgtcttattgacagtgtctgttgccttatggaagctt
tgtaattttatgaggtcccatttgtcgattcttgatcttacagcagaagc
tattgctgttctattcaggaatgtttcccctgtgtccatatctttgaggc
ttttccccactttttcctctataaatttcagtgtctctggttttatgtgg
agttccctgatccacttagatttgaccttagcacaaggagacaggaatgg
atcaattcgcattcttctaatgataactgccagttgtgtcagcatcattt
cttttgtgccacctgtcttttttccactggatggttttagttcccttgtc
aaaggacaagtgaccataggtttgtgggttcatttctgggtcttcaattc
tattccattggtctaattctctgtcgctataccagtactatgcagttttt
tatcataattgctctgtagtacagctttaggtcaggcatggtgattccac
cagaggttctttgatctttgagaagagtttttgctttcctaggttttttt
gttattccagatgaatttgcaaattgccctttctaattctttgaagaatt
ggattggaattttgatggggattgcatttgaatctgtagattgcttttgg
aaagatagccattttttgtatattggatcctgcatttccataagcatggg
agatcttttccttctctgagctcttcttaatttctttcttcagagactgg
acgttcttatcatacagatctttcacttccttagttagagtcacgccaag
gtatttggttaatttgtgactaatgagaaggattagtttccctaatttct
ttctcagcctgggtttattctttgttgtagagaaaggccatttgacttgt
tgagtaattttatatcctgcttacttcattgagctgtttatcagggttta
gagtttctcttggggaaatttttagggctccttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_70499892_70500911
seq2: B6Ng01-074D12.b_45_1063

seq1  GAATTCCATCTGTATTCAGAATTCAAAACTTCTTGTGCTTCTCTTTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTGTATTCAGAATTCAAAACTTCTTGTGCTTCTCTTTTAAT  50

seq1  TACGTTATTTGTATAAACATACATGTATGAAGGTTGGAGGACAGCTCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTTATTTGTATAAACATACATGTATGAAGGTTGGAGGACAGCTCATA  100

seq1  AGAATTGGTTGCCTCCTTCCTCCATATTAATTCCATAAACTTAACTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGGTTGCCTCCTTCCTCCATATTAATTCCATAAACTTAACTTAGA  150

seq1  GATTCATGCTAAGTAGCAAGGGCCTTTTCTCACTGAGCCACATAGTCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATGCTAAGTAGCAAGGGCCTTTTCTCACTGAGCCACATAGTCACC  200

seq1  TCTTTACTGTGCTTCTTGGTAGATGCTTCTGATATGTTGGCCTGTTTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACTGTGCTTCTTGGTAGATGCTTCTGATATGTTGGCCTGTTTAGC  250

seq1  ACTGGCAACACATTATATAAATGATATAAAACAATTTTATAAACAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAACACATTATATAAATGATATAAAACAATTTTATAAACAATTTT  300

seq1  TAAAACAATTTCTGTATTATTTTTATATATGATATTTTAACTTTGCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAATTTCTGTATTATTTTTATATATGATATTTTAACTTTGCTTTT  350

seq1  CCAGATAAAAAATTTAAATTTATTGAGATGGCTCAGGAGTACAGGTGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATAAAAAATTTAAATTTATTGAGATGGCTCAGGAGTACAGGTGTTA  400

seq1  GTTTCCAAAGTTGAATGATCTCAGTTTGATTGATAGAACCTATTCACATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAAAGTTGAATGATCTCAGTTTGATTGATAGAACCTATTCACATC  450

seq1  ATAGGAAGAAGGAAATGAAAGTTATCCTCTGCCTCCCACCAATATGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAGAAGGAAATGAAAGTTATCCTCTGCCTCCCACCAATATGGCTT  500

seq1  GACAAACCATGTGCCCTCACACATGAATCAATATACACACACCACACACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACCATGTGCCCTCACACATGAATCAATATACACACACCACACACC  550

seq1  CACATATACATACACAATCCCTAACATTATATAATAAAATTATGTAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATACATACACAATCCCTAACATTATATAATAAAATTATGTAAATG  600

seq1  TTTATAAATATATAGAATGTTGTGGAAGATAATTAGTATCTTTAATTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAATATATAGAATGTTGTGGAAGATAATTAGTATCTTTAATTTTT  650

seq1  CTATAGTATTATTTGTTCTTTATTATAAGTCTGTTGTCTTCAACTACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTATTATTTGTTCTTTATTATAAGTCTGTTGTCTTCAACTACAAA  700

seq1  TGGATTTATAAAAAAAAAAGAAAACTCAGCATAAAACTAGATACATTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTATAAAAAAAAAAGAAAACTCAGCATAAAACTAGATACATTGAA  750

seq1  ACTGGCAAAACAGAAAACTGCTGTATCCATAAAGTACTTGACCCAGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAAAACAGAAAACTGCTGTATCCATAAAGTACTTGACCCAGGAAA  800

seq1  AGAATTTCTGAACAGGACACCATCATTACAGGTACTAACATCAACAATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCTGAACAGGACACCATCATTACAGGTACTAACATCAACAATCA  850

seq1  ATAAATAAGAACTCATGAGACTAAGAAGGTTCTGCACAACAATGAACACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAGAACTCATGAGACTAAGAAGGTTCTGCACAACAATGAACACC  900

seq1  ATCATTTAGACAAAAATGACATGGTGTTAGATGCCCTAGTGTAGGGGAAT  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTAGAC-AAAATGACATGGTGTTAGATGCCCTAGTGTAGGGGAAT  949

seq1  GCCAGGAAAGAGACAGGAGTGGAATAGCACCCTTATAGAGGCAGGGGAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCCAGGAAAGAGACAGGAGTGGAATAGCACCCTTATAGAGGCA-GGGAGG  998

seq1  GGCA-GGGGGAGGGGGAGGTT  1020
      |||| ||||||||||||||||
seq2  GGCAGGGGGGAGGGGGAGGTT  1019