BAC Information

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BAC

Clone NameB6Ng01-074H22
Chromosome5 (Build37)
Map Location 84,754,183 - 84,755,351
singlet/doubletsinglet
Overlap geneEpha5
Upstream geneSrd5a2l2, LOC100039608, LOC231368, LOC100039489
Downstream genenone
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074H22.bB6Ng01-074H22.g
ACCDH891329DH891330
length9041,157
definitionDH891329|Mus musculus domesticus DNA, BAC clone: B6Ng01-074H22, 5' end.DH891330|Mus musculus domesticus DNA, BAC clone: B6Ng01-074H22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagggtattacctactttcttttctaggttcagtgtatctggtt
ttatgttgacagttgatccaagaaacaaagagaataatacaaagagaaaa
tgaaactcaaagttgattctttgagaaaaccaacaagatagaccaacttt
tatcaaaataaactaaaatattgggaaataatagccatattaacacgata
agaaacagaaagagagatgtaacaatagacaccaaggaaaacaatatatt
cataagaacatattttaaaaacctgtgttccactaaattattaaatttaa
aagaaatggataattttcttgataggtaccacttaccaaaattaaattaa
gattagataaatagtttatagtataacccctagttaaataggaacagtca
ttaacaatctcccaaccaaagaatttgtccaatagcagatggttttagca
ccgaattttaccagacattcaaagaactgttaatgccaatattcctcaaa
ttatttcacaagctacagagataggaaaaattgtctgatttattttatga
ggctacagttaccttgatacccaaagtatgtaaagccttaacaaaaagat
aattaaagaccaatttttcttattaacacacgtacaatgttcaatgaaac
acttggaaatcttatccaataacacatcaaataaatcatgtaattcaata
ggcttcatctccaaagattcaagatgaatcaatattaaaaaaaaaaaaaa
aagaaaagaaaaaaagaaaacacatgggtcacctgatttatatgcagaaa
aagccattaaaaaaattcaacaccacttcacaataaaagtttctagagag
ataagataagaaatataatagacatacatatatgtgaaaaaaataaaatg
tatc
gaattcctaaggcttccactgggtgagatcaaagagcctgctaaaatcct
ccctgacatctctgacccacattctcactcccatcatctcataagtatct
gactaaaaacattaatgacaatgttgaaaatatggcttagaatgaaaggg
aacaaaaagcaaggacaatattctgtaaaactattgtagaactccaaacc
cccagtagagcatggtttaagctgaaagaaccaaaactcatctattttta
ttatccttatgtgtcatacaggaaaataaacatgagggatgagctagtta
attgccagttcatggtgtttcctcctatctgaagggtatgtgcacatgta
tacacacacacaatcatgaacatacatacatggatacatagagcgcatac
atacctgcaaacacaggtgcaaaaattcataaacacctgcatacatacat
atgaatacacatgcatgcatacatgcacatatccacccatgaatatacag
tcacacacacaaaaaccactttcattttatacttgtataactcctaacat
tggctgaaattttaaaattaagattagtttcttattgttgaataaaatag
cattcttattgttgagtaaaatagaaccaacagttcaatttctttgatgt
ttttttggtaatgtgcctaattaaaaataactaggctccccaatgaataa
ttacaggaacacctaatatgctatacttccagccacttttttgtgcatca
aaaatatgagccagaaatatgaatgatcaccatattgtttccctgctgta
tctgaactcctttcttgaatcttagctctttcctgagttgggtattttca
actttttccttgctgcgccattcatctcccagtttggacaattaacaaga
gcttttcctccacagcccttgaggggcaccatgctttacctgtattttag
cacgcactatataccttctcactccactggttttggcagtgacccacaat
ccaatctctttcccatttatagaagtgcaccatatatgtaggctaattct
attactacttcatccactcacagtgatgagaatgatggcttgctctgcat
cttgagtatgcagcaccagtcacgggaactcagcagtcaacatttgaatt
catgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_84754183_84755351
seq2: B6Ng01-074H22.g_71_1227

seq1  GAATTCCTAAGGCTTCCACTGGGTGAGATCAAAGAGCCTGCTAAAATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAGGCTTCCACTGGGTGAGATCAAAGAGCCTGCTAAAATCCT  50

seq1  CCCTGACATCTCTGACCCACATTCTCACTCCCATCATCTCATAAGTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGACATCTCTGACCCACATTCTCACTCCCATCATCTCATAAGTATCT  100

seq1  GACTAAAAACATTAATGACAATGTTGAAAATATGGCTTAGAATGAAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAAAACATTAATGACAATGTTGAAAATATGGCTTAGAATGAAAGGG  150

seq1  AACAAAAAGCAAGGACAATATTCTGTAAAACTATTGTAGAACTCCAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAGCAAGGACAATATTCTGTAAAACTATTGTAGAACTCCAAACC  200

seq1  CCCAGTAGAGCATGGTTTAAGCTGAAAGAACCAAAACTCATCTATTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTAGAGCATGGTTTAAGCTGAAAGAACCAAAACTCATCTATTTTTA  250

seq1  TTATCCTTATGTGTCATACAGGAAAATAAACATGAGGGATGAGCTAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTTATGTGTCATACAGGAAAATAAACATGAGGGATGAGCTAGTTA  300

seq1  ATTGCCAGTTCATGGTGTTTCCTCCTATCTGAAGGGTATGTGCACATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCAGTTCATGGTGTTTCCTCCTATCTGAAGGGTATGTGCACATGTA  350

seq1  TACACACACACAATCATGAACATACATACATGGATACATAGAGCGCATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACACACAATCATGAACATACATACATGGATACATAGAGCGCATAC  400

seq1  ATACCTGCAAACACAGGTGCAAAAATTCATAAACACCTGCATACATACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGCAAACACAGGTGCAAAAATTCATAAACACCTGCATACATACAT  450

seq1  ATGAATACACATGCATGCATACATGCACATATCCACCCATGAATATACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATACACATGCATGCATACATGCACATATCCACCCATGAATATACAG  500

seq1  TCACACACACAAAAACCACTTTCATTTTATACTTGTATAACTCCTAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACACAAAAACCACTTTCATTTTATACTTGTATAACTCCTAACAT  550

seq1  TGGCTGAAATTTTAAAATTAAGATTAGTTTCTTATTGTTGAATAAAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGAAATTTTAAAATTAAGATTAGTTTCTTATTGTTGAATAAAATAG  600

seq1  CATTCTTATTGTTGAGTAAAATAGAACCAACAGTTCAATTTCTTTGATG-  649
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CATTCTTATTGTTGAGTAAAATAGAACCAACAGTTCAATTTCTTTGATGT  650

seq1  TTTTTTGGTAATGTGCCTAATTAAAAATAACTAGGCTCCCCAATGAATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGTAATGTGCCTAATTAAAAATAACTAGGCTCCCCAATGAATAA  700

seq1  TTACAGGAACACCTAATATGCTATACTTCCAGCCACTTTTTTGTGCATCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGAACACCTAATATGCTATACTTCCAGCCACTTTTTTGTGCATCA  750

seq1  AAAATATGAGCCAGAAATATGAATGATCACCATATTG-TTCCCTGCTGTA  798
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAAATATGAGCCAGAAATATGAATGATCACCATATTGTTTCCCTGCTGTA  800

seq1  TCTGAACT-CTTTC-TGAATCTAAGCTCTTTCCTGAGTTGGGTATTTTCA  846
      |||||||| ||||| ||||||| |||||||||||||||||||||||||||
seq2  TCTGAACTCCTTTCTTGAATCTTAGCTCTTTCCTGAGTTGGGTATTTTCA  850

seq1  --CTTTTCCTTGCTGCG-CAATCATCTCCCAG-TTGGACAATTAACAAGA  892
         |||||||||||||| || ||||||||||| |||||||||||||||||
seq2  ACTTTTTCCTTGCTGCGCCATTCATCTCCCAGTTTGGACAATTAACAAGA  900

seq1  GCTTTTCCTCCACAGCCCTTGAGGGGCAACATGCTTTACCCTGTATTTTA  942
      |||||||||||||||||||||||||||| ||||||||| |||||||||||
seq2  GCTTTTCCTCCACAGCCCTTGAGGGGCACCATGCTTTA-CCTGTATTTTA  949

seq1  GCACGCACTATATACCTTCTTCACTCCAACTGGTTTTGGCAGTGACCCAC  992
      ||||||||||||||||||| ||||||| ||||||||||||||||||||||
seq2  GCACGCACTATATACCTTC-TCACTCC-ACTGGTTTTGGCAGTGACCCAC  997

seq1  AATCTAAATCTCTTTTCCCCATTTAATAGAAGTGAAACCATAATTATGTA  1042
      ||||  |||||||||  ||||||| |||||||||  ||||||  ||||||
seq2  AATC-CAATCTCTTT--CCCATTT-ATAGAAGTG-CACCATA--TATGTA  1040

seq1  GGGCTAATTTCAAATTACTACTTCATTCCACTCACAAGTGATGAAGATTA  1092
       ||||||||    |||||||||||| ||||||||| ||||||| ||| | 
seq2  -GGCTAATT--CTATTACTACTTCA-TCCACTCAC-AGTGATG-AGAATG  1084

seq1  GTGGTCTTGCTCTGCATC-TGAGTATGCCAGCAACACAAGCACGGGAGAA  1141
       ||| ||||||||||||| |||||||| |||||   ||  |||||  |||
seq2  ATGG-CTTGCTCTGCATCTTGAGTATG-CAGCA--CCAGTCACGG--GAA  1128

seq1  CTCAGCAGGCAACATTTG-ATTCATGTGA  1169
      |||||||| ||||||||| ||||||||||
seq2  CTCAGCAGTCAACATTTGAATTCATGTGA  1157