BAC Information

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BAC

Clone NameB6Ng01-080N06
Chromosome5 (Build37)
Map Location 3,821,285 - 3,822,437
singlet/doubletsinglet
Overlap geneKrit1
Upstream geneLOC171266, LOC100040892, LOC667565, LOC624254, LOC100040940, LOC667585, LOC100034726, Cdk6, 5830415L20Rik, 1700109H08Rik, C030048B08Rik, Pex1, Gatad1, 4930511M11Rik, Ankib1
Downstream gene4932412H11Rik, LOC100041009, LOC667617, Mterf, Akap9, Cyp51, ENSMUSG00000053178, LOC100041073, Fzd1, LOC667678, Pftk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080N06.bB6Ng01-080N06.g
ACCDH895854DH895855
length1,142247
definitionDH895854|Mus musculus domesticus DNA, BAC clone: B6Ng01-080N06, 5' end.DH895855|Mus musculus domesticus DNA, BAC clone: B6Ng01-080N06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttgtaggcctagaccttcaggtagagaatttaacattacatt
acaatacacagcaacagaccaaacctcaacactatacgctggagggtatg
aagttgggcagaaattatcttgttcctctatggtatgtaattttttttat
tagatgttttctttatttacattgcaaattttatcccctttcctcatttc
ccctccaacccccaccccatctcatcctgcccttcacttgctcactaaac
cacccactcctgcttccctgtcctggcattcccctacactggggcatcga
gccttcacaagaccaagggactctcctctcattgatgtcccacaaggtca
tcctctgctacatatgaggctggagacatgggtccctccatgtataccct
ttggttggtggtttagtacccgggagctctgggggtgttcctcctattgg
gctgcaaatcccttaagcttcttgtgtcctttctctaactcctccattgg
ggacactgtgctcagtccaatgggtgactgtgagcatccatttctgtatt
tatgtaattattttgaatgtgtatgtgaatgtgtctgcatgtgcttgtga
gtatctacagggaccataagatggcattggattccctgaacctggaattg
caagtgattgtgaacctctcaaaataggtgtagggaattaaactccaatt
ctctacaagaacagcaagtgttcttgactactcaactgtctgttcaggct
caggatatagaatttttagatggcttacatggcttttcatattttttcct
agtatgaaaaagttcgaatctatagaatggatggatcataccgttctgtt
gaactaaagcatggcaataataccacagcacagcagataatggagggaat
gcggctctctcaggaaactcagcgatatttcactatttggatctgttcag
aaaatcttagtagaaacttgagagggggaagtagtttactatttaaatct
cattgctctttttggatgtgtataagaaacttgtggatagcagtaattat
attgacttttagctatattccatattattagttgtcaactgaaatgctca
tcaaagcatgcttaatagtaaccaccaaggttttctctctga
tgcaggcaaatggggggaacttgagattatcatcctgagtgagatgaacg
tgcatggtatgtactcactcataagtggatatcagccataaagtactagt
gccatgttacactccacagacccaaggaagctaaacaagaaggaaggccc
aagtgaggaagcctgagtctcactaaaaggggaaatagtcataagaggca
gatgaagagagagaactgggtgggagaggggatggagagaggaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_3821285_3822437
seq2: B6Ng01-080N06.b_45_1186

seq1  GAATTCACTTGTAGGCCTAGACCTTCAGGTAGAGAATTTAACATTACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTAGGCCTAGACCTTCAGGTAGAGAATTTAACATTACATT  50

seq1  ACAATACACAGCAACAGACCAAACCTCAACACTATACGCTGGAGGGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACACAGCAACAGACCAAACCTCAACACTATACGCTGGAGGGTATG  100

seq1  AAGTTGGGCAGAAATTATCTTGTTCCTCTATGGTATGTAATTTTTTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGGCAGAAATTATCTTGTTCCTCTATGGTATGTAATTTTTTTTAT  150

seq1  TAGATGTTTTCTTTATTTACATTGCAAATTTTATCCCCTTTCCTCATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTTTTCTTTATTTACATTGCAAATTTTATCCCCTTTCCTCATTTC  200

seq1  CCCTCCAACCCCCACCCCATCTCATCCTGCCCTTCACTTGCTCACTAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCAACCCCCACCCCATCTCATCCTGCCCTTCACTTGCTCACTAAAC  250

seq1  CACCCACTCCTGCTTCCCTGTCCTGGCATTCCCCTACACTGGGGCATCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACTCCTGCTTCCCTGTCCTGGCATTCCCCTACACTGGGGCATCGA  300

seq1  GCCTTCACAAGACCAAGGGACTCTCCTCTCATTGATGTCCCACAAGGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCACAAGACCAAGGGACTCTCCTCTCATTGATGTCCCACAAGGTCA  350

seq1  TCCTCTGCTACATATGAGGCTGGAGACATGGGTCCCTCCATGTATACCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCTACATATGAGGCTGGAGACATGGGTCCCTCCATGTATACCCT  400

seq1  TTGGTTGGTGGTTTAGTACCCGGGAGCTCTGGGGGTGTTCCTCCTATTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGGTGGTTTAGTACCCGGGAGCTCTGGGGGTGTTCCTCCTATTGG  450

seq1  GCTGCAAATCCCTTAAGCTTCTTGTGTCCTTTCTCTAACTCCTCCATTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAAATCCCTTAAGCTTCTTGTGTCCTTTCTCTAACTCCTCCATTGG  500

seq1  GGACACTGTGCTCAGTCCAATGGGTGACTGTGAGCATCCATTTCTGTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTGTGCTCAGTCCAATGGGTGACTGTGAGCATCCATTTCTGTATT  550

seq1  TATGTAATTATTTTGAATGTGTATGTGAATGTGTCTGCATGTGCTTGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAATTATTTTGAATGTGTATGTGAATGTGTCTGCATGTGCTTGTGA  600

seq1  GTATCTACAGGGACCATAAGATGGCATTGGATTCCCTGAACCTGGAATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTACAGGGACCATAAGATGGCATTGGATTCCCTGAACCTGGAATTG  650

seq1  CAAGTGATTGTGAACCTCTCAAAATAGGTGTAGGGAATTAAACTCCAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGATTGTGAACCTCTCAAAATAGGTGTAGGGAATTAAACTCCAATT  700

seq1  CTCTACAAGAACAGCAAGTGTTCTTGACTACTCAACTGTCTGTTCAGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAAGAACAGCAAGTGTTCTTGACTACTCAACTGTCTGTTCAGGCT  750

seq1  CAGGATATAGAATTTTTAGATGGCTTACATGGCTTTTCATATTTTTTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATATAGAATTTTTAGATGGCTTACATGGCTTTTCATATTTTTTCCT  800

seq1  AGTATGAAAAAGTTCGAATCTATAGAATGGATGGATCATACCGTTCTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAAAAAGTTCGAATCTATAGAATGGATGGATCATACCGTTCTGTT  850

seq1  GAACTAAAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAAT  900

seq1  GCGGCTCTCTCAGGAAACTCAGCGATATTTCACTATTTGGATCTGTTCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTCTCTCAGGAAACTCAGCGATATTTCACTATTTGGATCTGTTCAG  950

seq1  AAAATCTTAGTAAGAAAACTTGAGAGGGGGAAGTAGTTTACTATTTAAAT  1000
      ||||||||||||   |||||||||||||||||||||||||||||||||||
seq2  AAAATCTTAGTA--GAAACTTGAGAGGGGGAAGTAGTTTACTATTTAAAT  998

seq1  CTCATTGCTCCTTTTTGGATGTGTATTAAGAAACTTGTGGATAGCAGTAA  1050
      ||||||||| ||||||||||||||| ||||||||||||||||||||||||
seq2  CTCATTGCT-CTTTTTGGATGTGTA-TAAGAAACTTGTGGATAGCAGTAA  1046

seq1  TTATTATTGACTTTTAGCTATATTTCATATTATTAGTGTTCAAACTGAAA  1100
      ||| |||||||||||||||||||| ||||||||||||  || ||||||||
seq2  TTA-TATTGACTTTTAGCTATATTCCATATTATTAGTTGTC-AACTGAAA  1094

seq1  TGCTTCATTCAAAGCATGCTGAAATTAGTAAACACCAGAGGTTTTCTCTC  1150
      ||| ||| |||||||||||| ||  |||||| ||||| ||||||||||||
seq2  TGC-TCA-TCAAAGCATGCTTAA--TAGTAACCACCA-AGGTTTTCTCTC  1139

seq1  TGA  1153
      |||
seq2  TGA  1142