BAC Information

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BAC

Clone NameB6Ng01-085E02
ChromosomeY (Build37)5 (Build37)
Map Location 2,652,656 - 2,652,69218,084,511 - 18,084,575
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244
Downstream geneLOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085E02.bB6Ng01-085E02.g
ACCDH898980DH898981
length1,030863
definitionDH898980|Mus musculus domesticus DNA, BAC clone: B6Ng01-085E02, 5' end.DH898981|Mus musculus domesticus DNA, BAC clone: B6Ng01-085E02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(2,652,656 - 2,652,692)(18,084,511 - 18,084,575)
sequence
gaattctttgtttagctttgtactccaatttttttttcaatttttcttac
acgggttcatgcaaccggccaggaagaacgcagcaaaccggaatcttctg
cggcaaagctttattgcttacatcttcaggagccagagagcaagagagca
agagctctattgcttacatctttaggagacagagcgcaagagcgcaagag
agcaagagtgcaagcaagagtgcaagagtgcaagagctcaagagagcaag
agccagagcaagagtgcaagagctctattgcttacatctttaggagccag
agcgcaagagagagaatggcgaaaccccgtcccttttaaggagaattatc
ctccgcctaggacgtgtcgctccctgattggctgcagcccatcggccgag
ttgtcttcacggggaaggcagagcacatgtagtggaaaactacccttggc
acatgcgcagattatttgtttaccatttagaacacaggatgtcagcgcca
tcttgcaacagcgaatgtgagggcggctccctacaattttttatttttca
ttttttattacatattttcctcaattacatttccaatgctatcccaaaag
tacccaataccctccccctaatggggctatttgattttctggagtccagc
ttcttgagctctttgtatatattggatattagtcccctatcagatttagg
attggtaaaaatcgtttcccattctgttggtggcctttttgtgacactga
cagtgtcttttgccttacagaagctttgcaattttatgaggtcccatttg
tcaattcttgatcttatagcacaagccattgctgttctgtttaggaattt
ttcccctgtgcccatatcttcgaggctttttcacactttctcctctataa
atatcagtgtggaagtcttatttagaagtctttgatccacttaaacttga
gctttgtacaagagataggaatggatcaattaccattcttctacatgaaa
actgccagtcgtgcagcaccatttgttgaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcactctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_2652656_2652692
seq2: B6Ng01-085E02.b_496_532 (reverse)

seq1  GTGTTCTAACTGGTAAACAAATAGTCTGCGCATGTGC  37
      ||||||||| ||||||||||||| |||||||||||||
seq2  GTGTTCTAAATGGTAAACAAATAATCTGCGCATGTGC  37

seq1: chr5_18084511_18084575
seq2: B6Ng01-085E02.g_388_452 (reverse)

seq1  CTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTC  50

seq1  CTTCTTACCAGTTGG  65
      |||||||||||||||
seq2  CTTCTTACCAGTTGG  65