BAC Information

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BAC

Clone NameB6Ng01-085E04
Chromosome5 (Build37)
Map Location 95,061,931 - 95,062,958
singlet/doubletsinglet
Overlap genenone
Upstream geneC87414, LOC666075, LOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421, AA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507
Downstream geneLOC621203, LOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049, EG666159, LOC666164, EG666169, D5Ertd577e, LOC100041354, LOC100040503, LOC666187, EG622731, LOC100041380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085E04.bB6Ng01-085E04.g
ACCDH898984DH898985
length1,2451,025
definitionDH898984|Mus musculus domesticus DNA, BAC clone: B6Ng01-085E04, 5' end.DH898985|Mus musculus domesticus DNA, BAC clone: B6Ng01-085E04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaactgaaaatcctctgtaaggcaaatgacatcatctatat
gacaaaatggtagcctaaagaacggaaaattaactttactgactgtatat
ttgacagagggctgatatccaaacattacaaatacctcaagaaattagac
atcagcaaaccaaatacaccttttaaaaagggagtgcagaggtcaacaga
gaattttcaaaagaggaatctctaatggtcaagaagcacttaaagaaata
tttactattcctagtcacaagcaaactgaaaggaccctgagactccatcc
tatacacatcatcatggctaagatcaaaactcaactaccagcacatgcta
gtgaggatgtggagctaggaataccatcccactgttgtgagaagtgtgca
aacttgtacaacaaatttggaaatgaatctgggtatttctcagaaataat
tctactttaagaacttgttatagcactccagggaatatattgaaaatgtg
tttcccccagagcacatggacacttgctaaagtacattcatagcacattt
attcataataactagaaactggaagcagcccacctgtacagcacccatag
aatggatgaggaaagtcttgtacatttatgccatgaaatactaatcaacc
attaaaaataaggactgttttataattttcaggccaatggataaaactgg
aaaatggataaaactggaaaatatgattgtaagtgaggtaacccacacac
aaaagaacttgcttagtgtgtactcagtgataagtaaatattgcccatag
agtacaggataactatactataatccaaacacccaaagaagctaagaatc
agtatggcccaaggtaagatgatgattgaatctcactcagaaggggaaat
aaaatgtatatcaatagtgtttgattagtggaactgtatgggaaagggta
tggagacaggaacagttttgggatcagtggtggtgggaagagctgtctcc
aaaggactgggagagggaaaagcatccatgtggggcatcctcagaagaat
cagagacttgggttgggcagctgctgggagataaggagtgatcttgctga
aacctacttacctgggataagactggatggcacccctgagccaacgaatt
tcaatgaaggtagggacccaccttcccaagttctccaactcctggctcag
aattgcattaagctgacaaagttaaggaatcacaccctgaggtgt
gaattctcacctgagaaatagcgaatggcagagaagcaccttaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaactctgaga
ttccacctcaaaccagtcaggatggctgagatcaaaaattcattttccat
tctttacgctgccattttttcctattgatgctgtcttttgccttacagag
gatattcagtttcatgaagcccatttattgttgatcttaatgcataagct
atggttgttctgtgcagtaattagtcaacttttacaataactttgagagc
cctgacaccattaatgatattcttcaaccagtagcatttaggagtggagg
atatcaaactatttacagtactagtgttttgttttcctctaatctaattg
tgactgtgccccttttcttttctcttgaagtaaaaagtatttcatatgca
agagccaccatgagctatagcctaaaaaggaagctcctgttactcgaaac
tagggatcactgagcaagagtgagggagagtgactggcatttctttcttt
tcctttctttccttttctttttttgatattatatttattagatatttttt
atttacatttcaaatgttaccccctttcctagtttctcctccaaaaatcc
cctatctcctacccctccccatggtcaagagcccacccactctcattgct
tgtcctggcaatcccctatattgaggcagagagtcttcccaggaccaagg
gtctctcctcccattgatgactgactaggcaatcctctgctacaaatata
gctagagcctcaagttccaccatgtgttttctttggttggtggtatagct
ccaagtagctctaagtgtactggttagttcatattgatgttccttctatg
aggcttcagtccccttcagctccctggctgttttctctggctcatccagt
ggcgaccttgtgctccgtccatagaaactatgagcattcacttctgtatt
tgccagcactggcagagcctcgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_95061931_95062958
seq2: B6Ng01-085E04.g_70_1094

seq1  GAATTCTCACCTGAGAAATAGCGAATGGCAGAGAAGCACCTTAAAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGAAATAGCGAATGGCAGAGAAGCACCTTAAAAAAAT  50

seq1  GTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACTCTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACTCTGAGA  100

seq1  TTCCACCTCAAACCAGTCAGGATGGCTGAGATCAAAAATTCATTTTCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCTCAAACCAGTCAGGATGGCTGAGATCAAAAATTCATTTTCCAT  150

seq1  TCTTTACGCTGCCATTTTTTCCTATTGATGCTGTCTTTTGCCTTACAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACGCTGCCATTTTTTCCTATTGATGCTGTCTTTTGCCTTACAGAG  200

seq1  GATATTCAGTTTCATGAAGCCCATTTATTGTTGATCTTAATGCATAAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCAGTTTCATGAAGCCCATTTATTGTTGATCTTAATGCATAAGCT  250

seq1  ATGGTTGTTCTGTGCAGTAATTAGTCAACTTTTACAATAACTTTGAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGTTCTGTGCAGTAATTAGTCAACTTTTACAATAACTTTGAGAGC  300

seq1  CCTGACACCATTAATGATATTCTTCAACCAGTAGCATTTAGGAGTGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACACCATTAATGATATTCTTCAACCAGTAGCATTTAGGAGTGGAGG  350

seq1  ATATCAAACTATTTACAGTACTAGTGTTTTGTTTTCCTCTAATCTAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAACTATTTACAGTACTAGTGTTTTGTTTTCCTCTAATCTAATTG  400

seq1  TGACTGTGCCCCTTTTCTTTTCTCTTGAAGTAAAAAGTATTTCATATGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTGCCCCTTTTCTTTTCTCTTGAAGTAAAAAGTATTTCATATGCA  450

seq1  AGAGCCACCATGAGCTATAGCCTAAAAAGGAAGCTCCTGTTACTCGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCACCATGAGCTATAGCCTAAAAAGGAAGCTCCTGTTACTCGAAAC  500

seq1  TAGGGATCACTGAGCAAGAGTGAGGGAGAGTGACTGGCATTTCTTTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATCACTGAGCAAGAGTGAGGGAGAGTGACTGGCATTTCTTTCTTT  550

seq1  TCCTTTCTTTCCTTTTCTTTTTTTGATATTATATTTATTAGATATTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTTTCCTTTTCTTTTTTTGATATTATATTTATTAGATATTTTTT  600

seq1  ATTTACATTTCAAATGTTACCCCCTTTCCTAGTTTCTCCTCCAAAAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATTTCAAATGTTACCCCCTTTCCTAGTTTCTCCTCCAAAAATCC  650

seq1  CCTATCTCCTACCCCTCCCCATGGTCAAGAGCCCACCCACTCCCATTGCT  700
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCTATCTCCTACCCCTCCCCATGGTCAAGAGCCCACCCACTCTCATTGCT  700

seq1  TGTCCTGGCAATCCCCTATATTGAGGCAGAGAGTCTTCCCAGGACCAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGCAATCCCCTATATTGAGGCAGAGAGTCTTCCCAGGACCAAGG  750

seq1  GTCTCTCCTCCCATTGATGACTGACTAGGCAATCCTCTGCTACAAATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCCTCCCATTGATGACTGACTAGGCAATCCTCTGCTACAAATATA  800

seq1  GCTAGAGCCTCAAGTTCCACCATGTGTTTTCTTTGGTTGGTGGTATAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGCCTCAAGTTCCACCATGTGTTTTCTTTGGTTGGTGGTATAGCT  850

seq1  CCAAGTAGCTCTAAGTGTACTGGTTAGTTCATATTGATGTTCCTTCTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAGCTCTAAGTGTACTGGTTAGTTCATATTGATGTTCCTTCTATG  900

seq1  AGGCTTCAGTCCCCTTCAGCTCCCTGGCTGTTTTCTCTGGCTCATCCAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCAGTCCCCTTCAGCTCCCTGGCTGTTTTCTCTGGCTCATCCAGT  950

seq1  GGCGACCTTGTGCTCCGTCCAATAGAAAACTATGAGCATTCACTTCTGTA  1000
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  GGCGACCTTGTGCTCCGTCC-ATAG-AAACTATGAGCATTCACTTCTGTA  998

seq1  TTTGCCAGGCACTGGCAGAGCCTCGCAG  1028
      ||||||| ||||||||||||||||||||
seq2  TTTGCCA-GCACTGGCAGAGCCTCGCAG  1025