BAC Information

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BAC

Clone NameB6Ng01-086C09
Chromosome5 (Build37)
Map Location 15,010,136 - 15,010,663
singlet/doubletsinglet
Overlap genenone
Upstream geneSema3e, LOC100042957, Pclo, ENSMUSG00000033219, LOC624245, Speer8-ps1
Downstream geneSpeer4c, Speer4d, 4930572O03Rik, Speer7-ps1, 4930519H02Rik, LOC100041781, Cacna2d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086C09.bB6Ng01-086C09.g
ACCDH899627DH899628
length8811,126
definitionDH899627|Mus musculus domesticus DNA, BAC clone: B6Ng01-086C09, 5' end.DH899628|Mus musculus domesticus DNA, BAC clone: B6Ng01-086C09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatttttccaagaattttaacatgaagggttgttaaatttta
tcaaattatttctcagaatctaatgagatgatcatgtggtctttgttttt
cagtggatttctgtatgttgaattatctctgcatttcttggatgaagcct
acttgattgtggtaaatgatcattttgatgtgttcttggatttggtttgc
aagaattttattgagtttttttttgcattgatattcataagcaaaaatgt
tctgaagttctctttctttgttgagtctttgtgtgtttaggtataagtgc
aactgtggcttcatagaacaaattgggtagcgttccttctgtttctattt
tgtgggatagtttgaagagtattgggattaggtcttctttgaaggtctga
tagaattctgcactaaacccatctagtcctgggctttgtttggttgggag
acttttaatgactgtttctatttctttggcagttatgggagtgttagact
gtttatctaatcctggtttcattttggtacctagtgtctgtctagaaaat
tgtccatttcatccaattttttcagtattgttgagtatagtcttttgtaa
taggacattatgatttttgaatattctgtttattctgttgttatttctcc
cttttcaattctgattttgttaatttggatactgtctctttgccctctgg
ttaatctggctaagggattatctattgtgttgctttctcaaagaaccagc
tcccggttttattgattctttgtttagttcttttgtttctacttggttga
tttcagctctgtatttgattatttcctgacatctactcctcttcggtgta
tgttgggaacaaaatacaagaaggggggggg

gaattcctgatctttccaaaacttttatcatgaatgggtgttgaatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatatgttcttggattcggttagcaagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgagt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatattctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggtgatatgggactgtctagatggtcaacttgatcctgactcaactt
tggtacctggtatctgtccagaaatttttccatttcatccaggttttcca
gttttgttgagtataaccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtccttgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaatcaactcctcgtttggtaaattctttga
atagttcttcttgtttccactgggttgatttcaccccttgagtttgatta
tttcctgccgtctactcctctgggtgaatttgcttcctttttttctagag
cttttagatgtgttgtcaagctgctagtatgtgctctcttccgtttcttc
ttggaagcactcagagctatgagttccctctaagaaatgctttcatgtgt
cccaaggtttgagtacgttgtgcttcattttcataactcttaatttcttc
ctttatcctttctgacaaggatcatgagaagatggtgttccgtttcacat
gaatgtgggcttttcattaattatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_15010136_15010663
seq2: B6Ng01-086C09.b_399_926

seq1  GGGATAGTTTGAAGAGTATTGGGATTAGGTCTTCTTTGAAGGTCTGATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGTTTGAAGAGTATTGGGATTAGGTCTTCTTTGAAGGTCTGATAG  50

seq1  AATTCTGCACTAAACCCATCTAGTCCTGGGCTTTGTTTGGTTGGGAGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGCACTAAACCCATCTAGTCCTGGGCTTTGTTTGGTTGGGAGACT  100

seq1  TTTAATGACTGCTTCTATTTCTTTGGCAGTTATGGGAGTGTTAGACTGTT  150
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGACTGTTTCTATTTCTTTGGCAGTTATGGGAGTGTTAGACTGTT  150

seq1  TATCTAATCCTGGTTTCATTTTGGTACCTAGTGTCTGTCTAGAAAATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAATCCTGGTTTCATTTTGGTACCTAGTGTCTGTCTAGAAAATTGT  200

seq1  CCATTTCATCCAATTTTTTCAGTATTGTTGAGTATAGTCTTTTGTAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCATCCAATTTTTTCAGTATTGTTGAGTATAGTCTTTTGTAATAG  250

seq1  GAAATTATGATTTTTGAATATTCTGTTTATTCTGTTGTTATTTCTCCCTT  300
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTATGATTTTTGAATATTCTGTTTATTCTGTTGTTATTTCTCCCTT  300

seq1  TTCAATTCTGATTTTGTTAATTTGGATACTGTCTCTTTGCCCTCTGGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTCTGATTTTGTTAATTTGGATACTGTCTCTTTGCCCTCTGGTTA  350

seq1  ATCTGGCTAAGGGATTATCTATTGTGTTGCTTTCTCAAAGAACCAGCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGCTAAGGGATTATCTATTGTGTTGCTTTCTCAAAGAACCAGCTCC  400

seq1  CGGTTTTATTGATTCTTTGTTTAGTTCTTTTGTTTCTACTTGGTTGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTTATTGATTCTTTGTTTAGTTCTTTTGTTTCTACTTGGTTGATTT  450

seq1  CAGCTCTGTATTTGATTATTTCCTGACATCTACTCCTCTTGGGTGTATGT  500
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAGCTCTGTATTTGATTATTTCCTGACATCTACTCCTCTTCGGTGTATGT  500

seq1  TGGGAACAAAATACAAGAAGGGGGGGGG  528
      ||||||||||||||||||||||||||||
seq2  TGGGAACAAAATACAAGAAGGGGGGGGG  528


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