BAC Information

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BAC

Clone NameB6Ng01-087B05
Chromosome5 (Build37)
Map Location 5,740,746 - 5,741,945
singlet/doubletsinglet
Overlap geneSteap1
Upstream geneFzd1, LOC667678, Pftk1, 1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik, Steap2
Downstream geneLOC727711, LOC546854, LOC100041208
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087B05.bB6Ng01-087B05.g
ACCDH900303DH900304
length1,1841,106
definitionDH900303|Mus musculus domesticus DNA, BAC clone: B6Ng01-087B05, 5' end.DH900304|Mus musculus domesticus DNA, BAC clone: B6Ng01-087B05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgcgtgtgctgaagctcggaggggcagtcaaaggcatcgacgt
ggaccgcgtgctgcaagtgcgagagccccggtcttttcagcatgctcgtc
tctcccgagtccttagtctacgaaagaaagggaacatcttaacactggac
aaagcatgggatttcttttacctgctccatcgttgtgcttcttggtgaat
agagcattcagaagctcgcttgtggataccaggcagctaaagccagtata
gtctgtgtaagactgacccaggatgcaccccgatacactggtgttccgca
cttgcctatttatttccctctttgtgttagagccagggtctgtagctcag
gcaggcttttctcccactgctgggcacgtgctgggttagcagcatatgct
accaaactgggttccatttctctttaaaataaaagagatacatgcccaca
caccaaggtttacacagttccttctcttttgaagacttgaaataatggaa
taattttttttttttttggacaggttttctcagtgtagtgctggctatcc
tggaacttactctgtagaccaggcttaaactcatagagatcttcctgtgt
ctgcctcccagtacttgaaattaaaagtgtgtaccagcacccagagggat
aagcttaagaagtccccccccaatatatatacatacacatacacatatat
atatctttaaataagtccagtattctttggaaaaatcagctaatatgcat
atcataatagtgttttgtaatatttctattggttcctgggcaattatgca
gagcagtagcagtgaatttattaagttaagtgcaaaggagctggaataat
agcgtcaatcaatcctagtagagaaaaatgtgaatttcattatgtggttg
cggttttaatgagaatggcaggaataacacggtgattacgaaaagggaat
atgaatttcattgtgtaattttgctccttgattatatatatatatctcaa
aacagataagttaatgatcagaaagctaaaaagaacaaaaagctacttac
tacctagtgactcctgcagacccatctgcttcctgacaagataatacttc
tctgtccccatgttttgtgctggtcagtattcaaagaagtatgatggata
agtttgttgccaggataaggaaacaagttgtaaa
gaattccacataaaaccagagacactaaaatttatagaggagaaagtggg
gaaaagcctcgaagatatggtcacaggggaaaattttctaaacagaacaa
caatggcttgtgctctaaaatcaagaactgacaaatgggacctcataaaa
ttgcaaagcttctgtaaagcaaaagacactgtcaataagacaaagaggac
aacaacaaattgggaaaggatttttaccaatcctaaatctgataggggac
taatatccaatatatacaaagagctcaagaaggtggactctagaaattca
aataaccccattaaaaatggggttcagagctaaacaaagaattctcaact
gaggaatattgaatggctgagaagcacctgaaaaaatgttcaacatcctt
aatcatcagggaaatgcaaatcaaaacaaccttgagattctacctcacac
cactcagaatgactaagatcaaaaattcaggtgacagcagacgctggcga
ggatatggagaaagaggaacactcctccattgttggtgtgattgcaagct
tgtacaactactctggaagtcagtctggatgttcctcagaaaattggaca
tagtactactggaagatccagcaatacctctcctgggtataataagtctc
ccagaagatgtcccaaccggtaagaaggacacatgctccactatgttcat
agcagccttatttataatagccagaagttggaaagaacccagatgttcct
caacagaaggaacagaggaagattttgctgaagggaccctgatatagctg
tctcgtatgagggctatgccagtgccttggcaaatacagaagtggatgct
cacagttatctatagatgcaacacagggctcccaacggagagctagagaa
agccacaatgagctgaatgggtttgcaaccatataggtggaacaacatat
tgaactaacagtaaccccagagttctatctctagctggcatgtcagaaga
agatgacttagtctgccatcactgggaagaagaggcccttgattagccat
ctttatgcccttgtacaggggatgtcatgaccaataagtgggagttggtc
tagcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_5740746_5741945
seq2: B6Ng01-087B05.b_44_1227

seq1  GAATTCCTGCGTGTGCTGAAGCTCGGAGGGGCAGTCAAAGGCATCGACGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCGTGTGCTGAAGCTCGGAGGGGCAGTCAAAGGCATCGACGT  50

seq1  GGACCGCGTGCTGCAAGTGCGAGAGCCCCGGTCTTTTCAGCATGCTCGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCGCGTGCTGCAAGTGCGAGAGCCCCGGTCTTTTCAGCATGCTCGTC  100

seq1  TCTCCCGAGTCCTTAGTCTACGAAAGAAAGGGAACATCTTAACACTGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCGAGTCCTTAGTCTACGAAAGAAAGGGAACATCTTAACACTGGAC  150

seq1  AAAGCATGGGATTTCTTTTACCTGCTCCATCGTTGTGCTTCTTGGTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATGGGATTTCTTTTACCTGCTCCATCGTTGTGCTTCTTGGTGAAT  200

seq1  AGAGCATTCAGAAGCTCGCTTGTGGATACCAGGCAGCTAAAGCCAGTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATTCAGAAGCTCGCTTGTGGATACCAGGCAGCTAAAGCCAGTATA  250

seq1  GTCTGTGTAAGACTGACCCAGGATGCACCCCGATACACTGGTGTTCCGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTAAGACTGACCCAGGATGCACCCCGATACACTGGTGTTCCGCA  300

seq1  CTTGCCTATTTATTTCCCTCTTTGTGTTAGAGCCAGGGTCTGTAGCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTATTTATTTCCCTCTTTGTGTTAGAGCCAGGGTCTGTAGCTCAG  350

seq1  GCAGGCTTTTCTCCCACTGCTGGGCACGTGCTGGGTTAGCAGCATATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTTTTCTCCCACTGCTGGGCACGTGCTGGGTTAGCAGCATATGCT  400

seq1  ACCAAACTGGGTTCCATTTCTCTTTAAAATAAAAGAGATACATGCCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACTGGGTTCCATTTCTCTTTAAAATAAAAGAGATACATGCCCACA  450

seq1  CACCAAGGTTTACACAGTTCCTTCTCTTTTGAAGACTTGAAATAATGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGGTTTACACAGTTCCTTCTCTTTTGAAGACTTGAAATAATGGAA  500

seq1  TAATTTTTTTTTTTTTTGGACAGGTTTTCTCAGTGTAGTGCTGGCTATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTTTTTTTTTTGGACAGGTTTTCTCAGTGTAGTGCTGGCTATCC  550

seq1  TGGAACTTACTCTGTAGACCAGGCTTAAACTCATAGAGATCTTCCTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTACTCTGTAGACCAGGCTTAAACTCATAGAGATCTTCCTGTGT  600

seq1  CTGCCTCCCAGTACTTGAAATTAAAAGTGTGTACCAGCACCCAGAGGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCAGTACTTGAAATTAAAAGTGTGTACCAGCACCCAGAGGGAT  650

seq1  AAGCTTAAGAAGTCCCCCCCCAATATATATACATACACATACACATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTAAGAAGTCCCCCCCCAATATATATACATACACATACACATATAT  700

seq1  ATATCTTTAAATAAGTCCAGTATTCTTTGGAAAAATCAGCTAATATGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTTAAATAAGTCCAGTATTCTTTGGAAAAATCAGCTAATATGCAT  750

seq1  ATCATAATAGTGTTTTGTAATATTTCTATTGGTTCCTGGGCAATTATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAATAGTGTTTTGTAATATTTCTATTGGTTCCTGGGCAATTATGCA  800

seq1  GAGCAGTAGCAGTGAATTTATTAAGTTAAGTGCAAAGGAGCTGGAATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTAGCAGTGAATTTATTAAGTTAAGTGCAAAGGAGCTGGAATAAT  850

seq1  AGCGTCAATCAATCCTAGTAGAGAAAAATGTGAATTTCATTATGTGGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTCAATCAATCCTAGTAGAGAAAAATGTGAATTTCATTATGTGGTTG  900

seq1  CGGTTTTAATGAGAATGGCAGGAATAACAGGGTGATTACGAAAAGGCGAA  950
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  CGGTTTTAATGAGAATGGCAGGAATAACACGGTGATTACGAAAAGG-GAA  949

seq1  TATGAATTTCATTGTGTAATTTTGCTCTTTGATTATATATATATATCT-A  999
      ||||||||||||||||||||||||||| |||||||||||||||||||| |
seq2  TATGAATTTCATTGTGTAATTTTGCTCCTTGATTATATATATATATCTCA  999

seq1  AAACAGATAAGTTAATGATCAGAAAGCTAAAAAGAACAAAAAGCTACTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAACAGATAAGTTAATGATCAGAAAGCTAAAAAGAACAAAAAGCTACTT-  1048

seq1  ACTACCTAGTGAACTCCTGCAGACACATCTGCTTCCTGACAAGATAATAC  1099
      ||||||||||| |||||||||||| |||||||||||||||||||||||||
seq2  ACTACCTAGTG-ACTCCTGCAGACCCATCTGCTTCCTGACAAGATAATAC  1097

seq1  TTCTCTGTCCACCATGTTTTGTGCTGGTCAGTAATTCAAAAGAAAGTATG  1149
      |||||||||| ||||||||||||||||||||| |||||||   |||||||
seq2  TTCTCTGTCC-CCATGTTTTGTGCTGGTCAGT-ATTCAAA--GAAGTATG  1143

seq1  TTGGATAATGTTTTGTTTGCACAAGGGATAAGGGGAAACAAAGTTTGTAA  1199
       |||||||   ||||||  ||    ||||||  ||||||||   ||||||
seq2  ATGGATAA--GTTTGTTGCCA----GGATAA--GGAAACAA--GTTGTAA  1183

seq1  A  1200
      |
seq2  A  1184