BAC Information

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BAC

Clone NameB6Ng01-093P17
Chromosome5 (Build37)
Map Location 4,467,168 - 4,468,305
singlet/doubletsinglet
Overlap genenone
Upstream geneCdk6, 5830415L20Rik, 1700109H08Rik, C030048B08Rik, Pex1, Gatad1, 4930511M11Rik, Ankib1, Krit1, 4932412H11Rik, LOC100041009, LOC667617, Mterf, Akap9, Cyp51, ENSMUSG00000053178, LOC100041073
Downstream geneFzd1, LOC667678, Pftk1, 1700015F17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093P17.bB6Ng01-093P17.g
ACCDH905320DH905321
length1,1811,132
definitionDH905320|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P17, 5' end.DH905321|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatgggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttggtcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagggacttgaagtttttatcat
acagatctttcacttccttcgtagagtcacgccgagatattttatattat
ttgtggctattgaagaagggtgttgttttcccttatttctttctcagctg
tttattctttgtttagagaaaggccattgactggtttgagtaattttatt
ccagctacttcaccggagctgttatcagttagagatctcgttgaaatttt
aggtcactatatatactaccatatcactgcaaaggaatttgacttcctct
tccattggtatcctgaacctcttttgtggcg
gaattcactggattatatttcttgttaaaaggacatagtcaaaatcgagt
tttcaagaagcagatggtggtaactgttgcaaagccgtgctgaagaccac
taactgtatagccttagactgtgaagagtggaggaagtgcttggaactag
atacagggccacaaattagtacagagaaagcaaagctggggaaaccaggg
ggaaggcagctggctgcatccttgctgtgactgtgtgatgctcttctata
aatgtgaccttggagacacaccagacagagggtgttcagggctcgctctc
ttcatgacttcttagacctgcatatcagtctacagtgattccattttaaa
gctcagtaatttttacaccagctgtatttgttcaagaccagttttgtcat
ataatttcatagtcgtatctggaaatattggggaaatcaagtgctcttgt
ttcattaaatagcagcagttcctaaatataaagttttccctttttagctt
aaaaaaaatctagttttcaaacatcatccacaatatttgtttaattcata
tatcactaaaaatttaaaccctaattgcactgagtagccctggaacttac
ctgcttaactttcctacggtgtctgatccatcaattaaccacccactgca
catgaagctcttggccagtattctaatagaatcagaatcccttgtggtac
tccaggaaggaaacccataaattatcctgagtttttaaaaatatgaaaat
tcataaagccttatatgagaagtctcaggtgctagactctttaatgattt
ttaaaaaattaatttcccacttcaaaaggagaaatatacctcaggttaca
gtttcaggaagatggggactggagaggaatggagtcaggaaacacagacg
attgcccctgtgtgtgggtccctctgaatccccttagggattttctcttc
tcatgatgccattattagtgatgtagggccatgagaacagagtctgctat
gagccccctgtgcgaatttatcagcagaagtcctgaaatcaaccagtggt
gtcctctaatgcctgaataaacagctcttccagcagaaaggcccaatggc
caatttattggtttgctagtactatgcccatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_4467168_4468305
seq2: B6Ng01-093P17.g_70_1201

seq1  GAATTCACTGGATTATATTTCTTGTTAAAAGGACATAGTCAAAATCGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGATTATATTTCTTGTTAAAAGGACATAGTCAAAATCGAGT  50

seq1  TTTCAAGAAGCAGATGGTGGTAACTGTTGCAAAGCCGTGCTGAAGACCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGAAGCAGATGGTGGTAACTGTTGCAAAGCCGTGCTGAAGACCAC  100

seq1  TAACTGTATAGCCTTAGACTGTGAAGAGTGGAGGAAGTGCTTGGAACTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTATAGCCTTAGACTGTGAAGAGTGGAGGAAGTGCTTGGAACTAG  150

seq1  ATACAGGGCCACAAATTAGTACAGAGAAAGCAAAGCTGGGGAAACCAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGGCCACAAATTAGTACAGAGAAAGCAAAGCTGGGGAAACCAGGG  200

seq1  GGAAGGCAGCTGGCTGCATCCTTGCTGTGACTGTGTGATGCTCTTCTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCAGCTGGCTGCATCCTTGCTGTGACTGTGTGATGCTCTTCTATA  250

seq1  AATGTGACCTTGGAGACACACCAGACAGAGGGTGTTCAGGGCTCGCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGACCTTGGAGACACACCAGACAGAGGGTGTTCAGGGCTCGCTCTC  300

seq1  TTCATGACTTCTTAGACCTGCATATCAGTCTACAGTGATTCCATTTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGACTTCTTAGACCTGCATATCAGTCTACAGTGATTCCATTTTAAA  350

seq1  GCTCAGTAATTTTTACACCAGCTGTATTTGTTCAAGACCAGTTTTGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTAATTTTTACACCAGCTGTATTTGTTCAAGACCAGTTTTGTCAT  400

seq1  ATAATTTCATAGTCGTATCTGGAAATATTGGGGAAATCAAGTGCTCTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCATAGTCGTATCTGGAAATATTGGGGAAATCAAGTGCTCTTGT  450

seq1  TTCATTAAATAGCAGCAGTTCCTAAATATAAAGTTTTCCCTTTTTAGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAAATAGCAGCAGTTCCTAAATATAAAGTTTTCCCTTTTTAGCTT  500

seq1  AAAAAAAATCTAGTTTTCAAACATCATCCACAATATTTGTTTAATTCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATCTAGTTTTCAAACATCATCCACAATATTTGTTTAATTCATA  550

seq1  TATCACTAAAAATTTAAACCCTAATTGCACTGAGTAGCCCTGGAACTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTAAAAATTTAAACCCTAATTGCACTGAGTAGCCCTGGAACTTAC  600

seq1  CTGCTTAACTTTCCTACGGTGTCTGATCCATCAATTAACCACCCACTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAACTTTCCTACGGTGTCTGATCCATCAATTAACCACCCACTGCA  650

seq1  CATGAAGCTCTTGGCCAGTATTCTAATAGAATCAGAATCCCTTGTGGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGCTCTTGGCCAGTATTCTAATAGAATCAGAATCCCTTGTGGTAC  700

seq1  TCCAGGAAGGAAACCCATAAATTATCCTGAGTTTTTAAAAATATGAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAAGGAAACCCATAAATTATCCTGAGTTTTTAAAAATATGAAAAT  750

seq1  TCATAAAGCCTTATATGAGAAGTCTCAGGTGCTAGACTCTTTAATGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAGCCTTATATGAGAAGTCTCAGGTGCTAGACTCTTTAATGATTT  800

seq1  TTAAAAAATTAATTTCCCACTTCAAAAGGAGAAATATACCTCAGGTTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATTAATTTCCCACTTCAAAAGGAGAAATATACCTCAGGTTACA  850

seq1  GTTTCAGGAAGATGGGGACTGGAGAGGAATGGAGTCAGGAAACACAGGAC  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTTTCAGGAAGATGGGGACTGGAGAGGAATGGAGTCAGGAAACACA-GAC  899

seq1  GATTGCCCCTGTGTGTGGGTCCCTCTGAATCCCCTTAGGGATTTTCTCTT  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GATTGCCCCTGTGTGTGGGTCCCTCTGAATCCCCTTAGGGATTTTCTC-T  948

seq1  TCTCATGATGCCATTATTAGTGATGTTAGGGCCATGAGAACAGAGTCTGC  1000
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTCATGATGCCATTATTAGTGATG-TAGGGCCATGAGAACAGAGTCTGC  997

seq1  TATGAGCCCCCTGTGCAGATTTATCAGCAG-AGT-CTGAAATCAAACAGT  1048
      ||||||||||||||||  |||||||||||| ||| |||||||||| ||||
seq2  TATGAGCCCCCTGTGCGAATTTATCAGCAGAAGTCCTGAAATCAACCAGT  1047

seq1  GGTGCACTCTAAATGCTGAATAAACAGCTC-TCCAGCAAAGAAGCCCCAA  1097
      ||||  ||||||   ||||||||||||||| ||||||| | ||| |||||
seq2  GGTGTCCTCTAATGCCTGAATAAACAGCTCTTCCAGCAGA-AAGGCCCAA  1096

seq1  TGCACAATATTTATTGGTTTTGCTAGGTGACTATGCCCATT  1138
      ||  ||  ||||||||| ||||||||   ||||||||||||
seq2  TGGCCA--ATTTATTGG-TTTGCTAG--TACTATGCCCATT  1132