BAC Information

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BAC

Clone NameB6Ng01-094P15
Chromosome5 (Build37)
Map Location 150,971,287 - 151,132,509
singlet/doubletdoublet
Overlap geneLOC667470, Fry
Upstream geneEG667410, LOC100040006, Uspl1, 2310047D07Rik, Alox5ap, 6330406I15Rik, 4930588N13Rik, LOC100040037, LOC100040062, 4930434E21Rik, Hsp110, EG433968, B3galtl, LOC100040089, Rxfp2
Downstream geneLOC100042068, Gm5, XM_359419, Brca2, B230342M21Rik, BC037393, Aprin, LOC100040180, Kl, LOC667510, Stard13, LOC630708
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094P15.bB6Ng01-094P15.g
ACCDH906042DH906043
length427381
definitionDH906042|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P15, 5' end.DH906043|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,132,077 - 151,132,509)(150,971,287 - 150,971,672)
sequence
atataactctaaatccaggaatcttcctcaaccttttaggtatctttttt
ggttttttttttttgttgttgttgttgttgttttgttttgtgtttggttg
gttggttggttggtttttggtttttcgagacagggtttctctgtgtagcc
ctggctgtcctggaactcactttgtagaccaggctggcctcgaactcaga
aatccgcttgcctctgcctcctgagtgctgggattaaaggcatgtgccac
cactcctggctccttttaggtattttgaaaccatttcaacaagagattac
tgctggcaatactgaacgacccttgtgtatagatgtgaagaaactgacca
taaaaggttcacttgatgattgtcttttacaaagagtccagtgttgcttt
gggatacagctagatcagacagcagca
cagagatttcctttttgagcccaaatgtttgccactccacatgacaccgg
atccagttccacgtgtgggcatggttagcatccaggctggttgtttgaga
cattcctctttagacacattagtggtttctcacaaggctcatttccaaat
ggctatagatgcagtcggtaatgacggtaaagatacgaagcgagcaccag
agggagctagaggcacgcagttgtctgcatccacacagcgcccttaatga
aaaaagatgccatgaaattgaaaaagagcaagggggagggggtggggttt
atgagaggatttggaacggaaaaagggaagatggaagtggtgtggtcata
ttatattctcaaaaaataaaaaggaacattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_151132077_151132509
seq2: B6Ng01-094P15.b_47_479 (reverse)

seq1  TGTTGCTGTCTGATCTAGCTGTATCCCAAAGCAACACTGGACTCTTTGTA  50
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGTCTGATCTAGCTGTATCCCAAAGCAACACTGGACTCTTTGTA  50

seq1  GAAGACAATCATCAACTGAACCTTTTCTGGTCAGTTTCTTCACATCTATA  100
       |||||||||||||| |||||||||| |||||||||||||||||||||||
seq2  AAAGACAATCATCAAGTGAACCTTTTATGGTCAGTTTCTTCACATCTATA  100

seq1  CACAAGGGTCCTTCAGTATTGCCAGCAGTAATCTCCTGTTGAAATGGTTT  150
      |||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  CACAAGGGTCGTTCAGTATTGCCAGCAGTAATCTCTTGTTGAAATGGTTT  150

seq1  CAAGATACCTAAAAGGAGCCAGGCGTGGTGGCACATGCCTTTAATCCCAG  200
      ||| ||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAAAATACCTAAAAGGAGCCAGGAGTGGTGGCACATGCCTTTAATCCCAG  200

seq1  CACTCAGGAGGCAGAGGCAAGCGGATTTCTGAGTTCGAGGCCAGCCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGGAGGCAGAGGCAAGCGGATTTCTGAGTTCGAGGCCAGCCTGGT  250

seq1  CTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCT  300

seq1  CGAAAAACCAAAAACCAACCAACCAACCAACCAAACACAAAACAAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAACCAAAAACCAACCAACCAACCAACCAAACACAAAACAAAACAA  350

seq1  CAACAACAACAACAAAAAAAAAAAACCAAAAAAGATACCTAAAAGGTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAACAAAAAAAAAAAACCAAAAAAGATACCTAAAAGGTTGA  400

seq1  GGAAGATTCCTGGATTTAGAGTTATATGAATTC  433
      |||||||||||||||||||||||||||||||||
seq2  GGAAGATTCCTGGATTTAGAGTTATATGAATTC  433

seq1: chr5_150971287_150971672
seq2: B6Ng01-094P15.g_66_452

seq1  GAATTCCAGAGATTTCCTTTTTGAGCCCAAATGTTTGCCACTCCACATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGATTTCCTTTTTGAGCCCAAATGTTTGCCACTCCACATGA  50

seq1  CACCGGATCCAGTTCCACGTGTGGGCATGGTTAGCATCCAGGCTGGTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGGATCCAGTTCCACGTGTGGGCATGGTTAGCATCCAGGCTGGTTGT  100

seq1  TTGAGACATTCCTCTTTAGACACATTAGTGGTTTCTCACAAGGCTCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACATTCCTCTTTAGACACATTAGTGGTTTCTCACAAGGCTCATTT  150

seq1  CCAAATGGCTATAGATGCAGTCGGTAATGACGGTAAAGATACGAAGCGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGGCTATAGATGCAGTCGGTAATGACGGTAAAGATACGAAGCGAG  200

seq1  CACCAGAGGGAGCTAGAGGCACGCAGTTGTCTGCATCCACACAGCGCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAGGGAGCTAGAGGCACGCAGTTGTCTGCATCCACACAGCGCCCT  250

seq1  TAATGAAAAAAGATGCCATGAAATTGAAAAAGAGCAAGGGGGAGGGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAAAAAGATGCCATGAAATTGAAAAAGAGCAAGGGGGAGGGGGTG  300

seq1  GGGTTTATGAGAGGATTTGGAACGGAAAAAGGGAAGATGGAAGTGGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTATGAGAGGATTTGGAACGGAAAAAGGGAAGATGGAAGTGGTGTG  350

seq1  GTCATATTATAATCTCAAAAAAT-AAAAGGAACATTT  386
      ||||||||||| ||||||||||| |||||||||||||
seq2  GTCATATTATATTCTCAAAAAATAAAAAGGAACATTT  387