BAC Information

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BAC

Clone NameB6Ng01-095I21
Chromosome5 (Build37)
Map Location 4,628,854 - 4,629,947
singlet/doubletsinglet
Overlap genenone
Upstream genePex1, Gatad1, 4930511M11Rik, Ankib1, Krit1, 4932412H11Rik, LOC100041009, LOC667617, Mterf, Akap9, Cyp51, ENSMUSG00000053178, LOC100041073
Downstream geneFzd1, LOC667678, Pftk1, 1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095I21.b
ACCDH906466
length1,066
definitionDH906466|Mus musculus domesticus DNA, BAC clone: B6Ng01-095I21, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagactgtgccacagaacacaactaagttttgccaaaagctaa
ttccattagtcttctatacctttaataatctgtacaatataattagcatt
tcctattttcttcaggaagtctgggctgattaaaaaggattatagtttat
cttttcattttgacccttcagactttctggatttttcagagcatcttgtg
attgtgtcaacaaactcccatctccatgagaattgagtagcacataatta
ttttgtcttaaaacaaacgaactctcagggctgaggagatgacttggcag
gtaaaagcacttgttgcccaagcagaagtgcctgagttcaatttcccatc
acctacataaaatgctggcctgccagtgctgtggagaacagagacaggat
tgctggggcttgctggccataagcttagccccaagttcaagtggtagatt
tttttctcaaggaactaaggcagagaagaaaaacagctacctactgaaga
ctcaattcaaataccatcctttctcagaaatcctgggcctttcccaacaa
cctttccacctgattcccaaactattaaccaactcattaattaatatatt
gtcacacaacatgattattttattggatctaatttgtattcatctaagtg
attttatattcttgtgaaaagaaatgaatcacaaattacatggccaaggg
gaatttctgttaaagtaaatgggatatggctattactgggtgacatcaca
tataatcagtatcagcagttccatccatggtcttgctgttccacagccac
aactctgcctccagcatgcctggctaaggatgatagacttccagggaatc
tacttttccctgtagtcttttgagagtcagaacaagttaaaactactaag
tagcatacatcctgcagttgactcatggtacattgtaaagcactactgct
atagagacatgcataattctatctggctggaggatcctcactacatgctt
ctctgagtcgttttcactgcctctgccgaagtctacagctatgacgtacc
atgccctctctcatac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_4628854_4629947
seq2: B6Ng01-095I21.b_42_1107 (reverse)

seq1  GTATGAGAGAGAGAGAAAGAGAAAGTTAATTAGACTGTAAGACCTTTGGG  50
      |||||||||||   |  |  | | || |  ||| |||| ||||  || ||
seq2  GTATGAGAGAG---GGCATGGTACGTCA--TAG-CTGT-AGAC--TTCGG  41

seq1  CAGA-GCAGTGAAAAACAAACCTCAGAAGAAGCAATGTAGTGAAGAATTC  99
      |||| ||||||||||  |   ||||| |||||| ||||||||| ||  ||
seq2  CAGAGGCAGTGAAAACGA---CTCAG-AGAAGC-ATGTAGTGAGGA--TC  84

seq1  TTCAAACCAGATAAGGAATTATGGATGGTTCTCTATAGCAGTAGGGCTTT  149
       || | |||||||  |||||||| |||  ||||||||||||||| |||||
seq2  CTCCAGCCAGATA--GAATTATGCATG--TCTCTATAGCAGTAGTGCTTT  130

seq1  ACAATGTACCATGAGTCAACTGCAGGATGTTATGCCTACTTGGTAGTTTT  199
      ||||||||||||||||||||||||||||| |||| |||||| ||||||||
seq2  ACAATGTACCATGAGTCAACTGCAGGATG-TATG-CTACTTAGTAGTTTT  178

seq1  AAACTTTGGTTCTGACTCTCAAAAGACTACAGGGAAAAGTAGATTCCCTG  249
       |||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  -AACTT--GTTCTGACTCTCAAAAGACTACAGGGAAAAGTAGATTCCCTG  225

seq1  GAAGGCTATCATCCTTAGCCAGGCATGCTGGAGGCAGAGTTGTGGCTGTG  299
      |||| |||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAAGTCTATCATCCTTAGCCAGGCATGCTGGAGGCAGAGTTGTGGCTGT-  274

seq1  GGAACAGCAAGACCATGGATGGAACTGCTGATACTGATTATATGTGATGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGCAAGACCATGGATGGAACTGCTGATACTGATTATATGTGATGT  324

seq1  CACCCAGTAATAGCCATATCCCATTTACTTTAACAGAAATTCCCCTTGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGTAATAGCCATATCCCATTTACTTTAACAGAAATTCCCCTTGGC  374

seq1  CATGTAATTTGTGATTCATTTCTTTTCACAAGAATATAAAATCACTTAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAATTTGTGATTCATTTCTTTTCACAAGAATATAAAATCACTTAGA  424

seq1  TGAATACAAATTAGATCCAATAAAATAATCATGTTGTGTGACAATATATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACAAATTAGATCCAATAAAATAATCATGTTGTGTGACAATATATT  474

seq1  AATTAATGAGTTGGTTAATAGTTTGGGAATCAGGTGGAAAGGTTGTTGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATGAGTTGGTTAATAGTTTGGGAATCAGGTGGAAAGGTTGTTGGG  524

seq1  AAAGGCCCAGGATTTCTGAGAAAGGATGGTATTTGAATTGAGTCTTCAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCCAGGATTTCTGAGAAAGGATGGTATTTGAATTGAGTCTTCAGT  574

seq1  AGGTAGCTGTTTTTCTTCTCTGCCTTAGTTCCTTGAGAAAAAAATCTACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGCTGTTTTTCTTCTCTGCCTTAGTTCCTTGAGAAAAAAATCTACC  624

seq1  ACTTGAACTTGGGGCTAAGCTTATGGCCAGCAAGCCCCAGCAATCCTGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAACTTGGGGCTAAGCTTATGGCCAGCAAGCCCCAGCAATCCTGTC  674

seq1  TCTGTTCTCCACAGCACTGGCAGGCCAGCATTTTATGTAGGTGATGGGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTCCACAGCACTGGCAGGCCAGCATTTTATGTAGGTGATGGGAA  724

seq1  ATTGAACTCAGGCACTTCTGCTTGGGCAACAAGTGCTTTTACCTGCCAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACTCAGGCACTTCTGCTTGGGCAACAAGTGCTTTTACCTGCCAAG  774

seq1  TCATCTCCTCAGCCCTGAGAGTTCGTTTGTTTTAAGACAAAATAATTATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCCTCAGCCCTGAGAGTTCGTTTGTTTTAAGACAAAATAATTATG  824

seq1  TGCTACTCAATTCTCATGGAGATGGGAGTTTGTTGACACAATCACAAGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTCAATTCTCATGGAGATGGGAGTTTGTTGACACAATCACAAGAT  874

seq1  GCTTTGAAAAATCCAGAAAGTCTGAAGGGTCAAAATGAAAAGATAAACTA  949
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAAAAATCCAGAAAGTCTGAAGGGTCAAAATGAAAAGATAAACTA  924

seq1  TAATCCTTTTTAATCAGCCCAGACTTCCTGAAGAAAATAGGAAATGCTAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTTTTTAATCAGCCCAGACTTCCTGAAGAAAATAGGAAATGCTAA  974

seq1  TTATATTGTACAGATTATTAAATGTATAGAAGACTAATGGAATTAGCTTT  1049
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTATATTGTACAGATTATTAAAGGTATAGAAGACTAATGGAATTAGCTTT  1024

seq1  TGGCAAAACTTAGTTGTGTTCTGTTGGCACATGTCTCATGAATTC  1094
      ||||||||||||||||||||||| ||||||| |||||| ||||||
seq2  TGGCAAAACTTAGTTGTGTTCTG-TGGCACA-GTCTCA-GAATTC  1066