BAC Information

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BAC

Clone NameB6Ng01-098P10
Chromosome5 (Build37)
Map Location 18,464,466 - 18,465,633
singlet/doubletsinglet
Overlap genenone
Upstream geneGnat3, Gnai1, LOC100041818, LOC668167
Downstream gene4921504A21Rik, Magi2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098P10.bB6Ng01-098P10.g
ACCDH908893DH908894
length1,2551,158
definitionDH908893|Mus musculus domesticus DNA, BAC clone: B6Ng01-098P10, 5' end.DH908894|Mus musculus domesticus DNA, BAC clone: B6Ng01-098P10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccatcttgagttctttatatatattggatattagtccc
ctatacgatttggtatacgtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttggtttgcagaagctttgcaatttta
tgaggtctcatttgttgattctcaatcttacagcacaagccattgctgtt
ctattcaggaatttttgccatgtacccatatcttcgaggcttttccctac
tttcccctctataagtttcagtgtctctggttttatgtggagttccttag
tccaattagatttgaccttagtacaaggagatagaaatggatcaattcgc
attcttctacatgataaccaccagttgtgccagcaccattttttgaaaat
gctgtctttttccactggatagtattggctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctgttccattggt
ctacttgtctgtcactataccagtatcattcagtttttatcacaattgct
ctgtagtacagctttaggtcaggcatggtaattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atctgccgattgccctttctaattcgttgaagaatggaattggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tactatattgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagatttgaagttcttattatac
agatctttcacttccttagttagaatcatgccaaggtattttatattatt
tgtgactcttgagaagggtgtggtttccctcatttctttctaagctgttt
atcctttatgtacagaaaggccattgacttgtttggagttaaatatatcc
agcctacttccttggaggctgtatcaaggcttaggaggtctctggtggta
ttttagaggtcactttatattatactatccattacctctgggagagtgat
atttgacttctcatgccaaatttgtatccgctgaattccatgtgtgctat
tggctctgctcagaactctaatacatacagttgtctctagagaagggcgg
atagt
gaattcctgtcctttcacttaataccagcctccctatctctttctttcta
ctccatttttcctcactccttataaatcttgctgttgtctggtgaacctt
aaacgcattgggtcatactgtctgagcatagctctgttctcaattttttt
tgtacatgatcctggagaattaatatatgtagcatcaagttgcacactag
acagaaaaaaattcataaagatcaaaatacagaagttgatagattttgga
ttttaaaaactattttcaattcacatttcatttaaattcattatagatat
aatatatatgtatattatatatatattgtcattaatgattggaagggtgc
aaatgtcattttaaaataagaaaattatttttgatgactagagtttgaaa
gcatatgttttcatagacacttctgagtgaaaatcacttccttgcctttg
gctattttctttttcattcccagttttctctaacctgcttaagaaacttt
gcaaatatcaagagtcaaatatttggattcagttagaaccctttctcacc
catacccagaacttaagaaactttttattctcattgtattttcaaataac
cttttctttaacttcaaggatttccaataagatagcaaaaaccatttgag
actgtatagaaaaataattaaaagtattgaattcttcaacctgtcttttt
taaaaatgtaacatatatttttaaaaatcttataaaagacgattttttaa
agcaagtgcacttggcatctgaaagagacattgaaaaaaataaatttaaa
agcagacactctgaataaaaagcccagccagaagcaaagcactaagtgtc
cagactatgtccatgtcagtgtcttcctgtaacttaaagtggttgaagtc
agcagattgggcacatacagagagacatacacacacacacacacactcac
acacacactcacacacacacacccctcccacaaatgcagaataattttaa
tgtccaaaacttagccttgtaacctaagaaatgaaggcctatcactctta
gctaccaaatatacagttttagtcatattcctggacggtttaataacaaa
ttaattggttactaggaataatttatgaggttattatcaaacaagaagtg
ccatgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_18464466_18465633
seq2: B6Ng01-098P10.g_66_1223

seq1  GAATTCCTGTCCTTTCACTTAATACCAGCCTCCCTATCTCTTTCTTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCCTTTCACTTAATACCAGCCTCCCTATCTCTTTCTTTCTA  50

seq1  CTCCATTTTTCCTCACTCCTTATAAATCTTGCTGTTGTCTGGTGAACCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTTTCCTCACTCCTTATAAATCTTGCTGTTGTCTGGTGAACCTT  100

seq1  AAACGCATTGGGTCATACTGTCTGAGCATAGCTCTGTTCTCAATTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGCATTGGGTCATACTGTCTGAGCATAGCTCTGTTCTCAATTTTTTT  150

seq1  TGTACATGATCCTGGAGAATTAATATATGTAGCATCAAGTTGCACACTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATGATCCTGGAGAATTAATATATGTAGCATCAAGTTGCACACTAG  200

seq1  ACAGAAAAAAATTCATAAAGATCAAAATACAGAAGTTGATAGATTTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAAAAATTCATAAAGATCAAAATACAGAAGTTGATAGATTTTGGA  250

seq1  TTTTAAAAACTATTTTCAATTCACATTTCATTTAAATTCATTATAGATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAACTATTTTCAATTCACATTTCATTTAAATTCATTATAGATAT  300

seq1  AATATATATGTATATTATATATATATTGTCATTAATGATTGGAAGGGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATATGTATATTATATATATATTGTCATTAATGATTGGAAGGGTGC  350

seq1  AAATGTCATTTTAAAATAAGAAAATTATTTTTGATGACTAGAGTTTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCATTTTAAAATAAGAAAATTATTTTTGATGACTAGAGTTTGAAA  400

seq1  GCATATGTTTTCATAGACACTTCTGAGTGAAAATCACTTCCTTGCCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGTTTTCATAGACACTTCTGAGTGAAAATCACTTCCTTGCCTTTG  450

seq1  GCTATTTTCTTTTTCATTCCCAGTTTTCTCTAACCTGCTTAAGAAACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTTCTTTTTCATTCCCAGTTTTCTCTAACCTGCTTAAGAAACTTT  500

seq1  GCAAATATCAAGAGTCAAATATTTGGATTCAGTTAGAACCCTTTCTCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATATCAAGAGTCAAATATTTGGATTCAGTTAGAACCCTTTCTCACC  550

seq1  CATACCCAGAACTTAAGAAACTTTTTATTCTCATTGTATTTTCAAATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCCAGAACTTAAGAAACTTTTTATTCTCATTGTATTTTCAAATAAC  600

seq1  CTTTTCTTTAACTTCAAGGATTTCCAATAAGATAGCAAAAACCATTTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTTAACTTCAAGGATTTCCAATAAGATAGCAAAAACCATTTGAG  650

seq1  ACTGTATAGAAAAATAATTAAAAGTATTGAATTCTTCAACCTGTCTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATAGAAAAATAATTAAAAGTATTGAATTCTTCAACCTGTCTTTTT  700

seq1  TAAAAATGTAACATATATTTTTAAAAATCTTATAAAAGACGATTTTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGTAACATATATTTTTAAAAATCTTATAAAAGACGATTTTTTAA  750

seq1  AGCAAGTGCACTTGGCATCTGAAAGAGACATTGAAAAAAATAAATTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTGCACTTGGCATCTGAAAGAGACATTGAAAAAAATAAATTTAAA  800

seq1  AGCAGACACTCTGAAT-AAAAGCCCAGCCAGAAGCAAAGCACTAAGTGTC  849
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGCAGACACTCTGAATAAAAAGCCCAGCCAGAAGCAAAGCACTAAGTGTC  850

seq1  CAGACTATGTCCATGTCAGTGTCTTCCTGTAACTTAAAGTGGTTGAAGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTATGTCCATGTCAGTGTCTTCCTGTAACTTAAAGTGGTTGAAGTC  900

seq1  AGCAGATTGGGCACATACAGAGAGACATACACACACACACACACACACAC  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGCAGATTGGGCACATACAGAGAGACATACACACACACACACACACTCAC  950

seq1  ACACACACACACACACACCAACACCCCTCCCCACAAATGCAGAATAATTT  999
      |||||||| |||||||||  |||||||| |||||||||||||||||||||
seq2  ACACACACTCACACACAC--ACACCCCT-CCCACAAATGCAGAATAATTT  997

seq1  TAATGTCCAAAACTTAAGCCTTTGTAACCTAAAGAAATGAAGCCTTATCA  1049
      ||||||||||||||| |||| ||||||||| ||||||||||| | |||||
seq2  TAATGTCCAAAACTT-AGCC-TTGTAACCT-AAGAAATGAAGGCCTATCA  1044

seq1  CTTCTTAGCTACCAAATATACATGTTTTAGTCATATTCTCTGACGTTTTT  1099
      | |||||||||||||||||||| |||||||||||||||   ||||  |||
seq2  C-TCTTAGCTACCAAATATACA-GTTTTAGTCATATTCCTGGACG-GTTT  1091

seq1  AATAACATAATTTATATGGTTTACTAGG-ATAATTTATGAGGTTTATTAT  1148
      ||||||| |||| || ||| |||||||| ||||||||||||| |||||||
seq2  AATAACA-AATTAAT-TGG-TTACTAGGAATAATTTATGAGG-TTATTAT  1137

seq1  CAAACAA-AGATGACATGTAT  1168
      ||||||| |  || |||||||
seq2  CAAACAAGAAGTGCCATGTAT  1158