MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-106M08
Chromosome	5 (Build37)
Map Location	3,852,855 - 3,965,624
singlet/doublet	doublet
Overlap gene	4932412H11Rik, LOC100041009, LOC667617, Mterf, Akap9
Upstream gene	LOC171266, LOC100040892, LOC667565, LOC624254, LOC100040940, LOC667585, LOC100034726, Cdk6, 5830415L20Rik, 1700109H08Rik, C030048B08Rik, Pex1, Gatad1, 4930511M11Rik, Ankib1, Krit1
Downstream gene	Cyp51, ENSMUSG00000053178, LOC100041073, Fzd1, LOC667678, Pftk1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC171266 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:171266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040892 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040892
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC667565 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC624254 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624254
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040940 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040940
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC667585 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	LOC100034726 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100034726
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Cdk6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12571 MGI:1277162
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5830415L20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68152 MGI:1915402
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700109H08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77036 MGI:1924286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C030048B08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269623 MGI:2442653
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pex1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71382 MGI:1918632
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gatad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67210 MGI:1914460
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930511M11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75010 MGI:1922305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankib1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70797 MGI:1918047
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Krit1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:79264 MGI:1930618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4932412H11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242838 MGI:3045299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041009 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041009
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 Proteins pseudo : _no_value

name	LOC667617 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667617
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 552 ESTs, 9 Proteins pseudo : _no_value

name	Mterf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545725 MGI:1918240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Akap9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100986 MGI:2178217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp51 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13121 MGI:106040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	ENSMUSG00000053178 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208595 MGI:3704243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041073 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	Fzd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14362 MGI:1196625
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667678 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667678
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Pftk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18647 MGI:894318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC171266 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:21717772 GeneID:171266
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, G10-like transcript_id : NM_134232.1

name	Cdk6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892426 GeneID:12571 MGI:1277162
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase 6 transcript_id : NM_009873.2

name	5830415L20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109948294 GeneID:68152 MGI:1915402
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5830415L20 gene transcript_id : NM_001042501.1

name	1700109H08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803495 GeneID:77036 MGI:1924286
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700109H08 gene transcript_id : NM_029843.2

name	C030048B08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348977 GeneID:269623 MGI:2442653
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C030048B08 gene transcript_id : NM_172991.3

name	Pex1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61657894 GeneID:71382 MGI:1918632
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisome biogenesis factor 1 transcript_id : NM_027777.1

name	Gatad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956153 GeneID:67210 MGI:1914460
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GATA zinc finger domain containing 1 transcript_id : NM_026033.1

name	4930511M11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803362 GeneID:75010 MGI:1922305
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930511M11 gene transcript_id : NM_029141.2

name	Ankib1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61656164 GeneID:70797 MGI:1918047
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and IBR domain containing 1 transcript_id : NM_001003909.2

name	Krit1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475699 GeneID:79264 MGI:1930618
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : KRIT1, ankyrin repeat containing transcript_id : NM_030675.2

name	4932412H11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377246 GeneID:242838 MGI:3045299
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932412H11 gene transcript_id : NM_172879.2

name	Mterf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111161294 GeneID:545725 MGI:1918240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial transcription termination factor transcript_id : NM_172135.2

name	Mterf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111161446 GeneID:545725 MGI:1918240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial transcription termination factor transcript_id : NM_001013023.2

name	Akap9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125661047 GeneID:100986 MGI:2178217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein (yotiao) 9 transcript_id : NM_194462.2

name	Cyp51 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71061450 GeneID:13121 MGI:106040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 51 transcript_id : NM_020010.2

name	ENSMUSG00000053178 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111161291 GeneID:208595 MGI:3704243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, ENSMUSG00000053178 transcript_id : NM_001042670.1

name	LOC100041073 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253509 GeneID:100041073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical protein LOC100041073 transcript_id : XM_001475743.1

name	Fzd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981156 GeneID:14362 MGI:1196625
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : frizzled homolog 1 (Drosophila) transcript_id : NM_021457.2

name	Pftk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755043 GeneID:18647 MGI:894318
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PFTAIRE protein kinase 1 transcript_id : NM_011074.1

name	LOC171266 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:21717773 GeneID:171266
definition	codon_start : 1 exception : unclassified translation discrepancy product : vomeronasal 1 receptor, G10-like protein_id : NP_598993.1

name	Cdk6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14149637 CCDS:CCDS19062.1 GeneID:12571 MGI:1277162
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004693 - cyclin-dependent protein kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : cyclin-dependent kinase 6 protein_id : NP_034003.1

name	5830415L20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109948295 GeneID:68152 MGI:1915402
definition	codon_start : 1 product : hypothetical protein LOC68152 protein_id : NP_001035966.1

name	1700109H08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249218 GeneID:77036 MGI:1924286
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC77036 protein_id : NP_084119.1

name	C030048B08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559873 CCDS:CCDS19064.1 GeneID:269623 MGI:2442653
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC269623 protein_id : NP_766579.2

name	Pex1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61657895 CCDS:CCDS19065.1 GeneID:71382 MGI:1918632
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : peroxin1 protein_id : NP_082053.1

name	Gatad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956154 CCDS:CCDS19066.1 GeneID:67210 MGI:1914460
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ocular development associated product : GATA zinc finger domain containing 1 protein_id : NP_080309.1

name	4930511M11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312892 CCDS:CCDS19067.1 GeneID:75010 MGI:1922305
definition	codon_start : 1 product : hypothetical protein LOC75010 protein_id : NP_083417.1

name	Ankib1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61656165 GeneID:70797 MGI:1918047
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : ankyrin repeat and IBR domain containing 1 protein_id : NP_001003909.2

name	Krit1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13994219 GeneID:79264 MGI:1930618
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence TAS]; GO:0005083 - small GTPase regulator activity [Evidence TAS] codon_start : 1 exception : mismatches in translation note : cerebral cavernous malformations 1 product : KRIT1, ankyrin repeat containing protein_id : NP_109600.1

name	4932412H11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370338 CCDS:CCDS19068.1 GeneID:242838 MGI:3045299
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC242838 protein_id : NP_766467.1

name	Mterf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111161447 GeneID:545725 MGI:1918240
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006353 - transcription termination [Evidence IEA] codon_start : 1 note : mitochondrial transcription termination factor 1 product : mitochondrial transcription termination factor precursor protein_id : NP_001013041.2

name	Mterf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26006865 GeneID:545725 MGI:1918240
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006353 - transcription termination [Evidence IEA] codon_start : 1 note : mitochondrial transcription termination factor 1 product : mitochondrial transcription termination factor precursor protein_id : NP_742147.1

name	Akap9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125661048 CCDS:CCDS19070.1 GeneID:100986 MGI:2178217
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0000242 - pericentriolar material [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : A kinase (PRKA) anchor protein (yotiao) 9 protein_id : NP_919444.2

name	Cyp51 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71061451 CCDS:CCDS19071.1 GeneID:13121 MGI:106040
definition	GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0008398 - sterol 14-demethylase activity [Evidence TAS] GO_process : GO:0006695 - cholesterol biosynthesis [Evidence TAS] codon_start : 1 note : cytochrome P450, 51 product : cytochrome P450, family 51 protein_id : NP_064394.2

name	LOC100041073 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253510 GeneID:100041073
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475793.1

name	ENSMUSG00000053178 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111161292 GeneID:208595 MGI:3704243
definition	codon_start : 1 note : mitochondrial transcription termination factor-like product : mitochondrial transcription termination factor-like precursor protein_id : NP_001036135.1

name	Fzd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981157 CCDS:CCDS19072.1 GeneID:14362 MGI:1196625
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004926 - non-G-protein coupled 7TM receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA]; GO:0007267 - cell-cell signaling [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0030855 - epithelial cell differentiation [Evidence IGI] [Evidence IDA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IGI] codon_start : 1 product : frizzled 1 protein_id : NP_067432.2

name	Pftk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755044 CCDS:CCDS19073.1 GeneID:18647 MGI:894318
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation function : cdk-related kinase product : PFTAIRE protein kinase 1 protein_id : NP_035204.1

name	LOC100040892 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040892
definition	number : 1 pseudo : _no_value

name	LOC100040892 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040892
definition	number : 2 pseudo : _no_value

name	LOC100040892 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040892
definition	number : 3 pseudo : _no_value

name	LOC667565 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667565
definition	number : 1 pseudo : _no_value

name	LOC624254 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624254
definition	number : 1 pseudo : _no_value

name	LOC624254 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624254
definition	number : 2 pseudo : _no_value

name	LOC624254 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624254
definition	number : 3 pseudo : _no_value

name	LOC624254 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624254
definition	number : 4 pseudo : _no_value

name	LOC624254 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624254
definition	number : 5 pseudo : _no_value

name	LOC100040940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040940
definition	number : 1 pseudo : _no_value

name	LOC100040940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040940
definition	number : 2 pseudo : _no_value

name	LOC100040940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040940
definition	number : 3 pseudo : _no_value

name	LOC100040940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040940
definition	number : 4 pseudo : _no_value

name	LOC100040940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040940
definition	number : 5 pseudo : _no_value

name	LOC100040940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040940
definition	number : 6 pseudo : _no_value

name	LOC100041009 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041009
definition	number : 1 pseudo : _no_value

name	LOC667678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667678
definition	number : 1 pseudo : _no_value

name	LOC667678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667678
definition	number : 2 pseudo : _no_value

name	LOC667678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667678
definition	number : 3 pseudo : _no_value

name	LOC667585 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253507 GeneID:667585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : similar to Speer4e protein pseudo : _no_value transcript_id : XR_032296.1

name	LOC100034726 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:130501680 GeneID:100034726
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L26 pseudogene pseudo : _no_value transcript_id : NR_003373.1

name	LOC667617 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253508 GeneID:667617
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 552 ESTs, 9 Proteins product : similar to ribosomal protein S4, X-linked X pseudo : _no_value transcript_id : XR_032360.1

clone name	MSMg01-414J18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-418L07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-114O07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-437A15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-539H15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-372I16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-300I14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-346H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-335H03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-423H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236O09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-177H07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-477M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065E07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-332P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045L05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-132J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529H05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-393P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112K19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-476P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-172F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512N13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-140D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530C11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-430N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169M19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-179M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545N21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-386K06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-213L10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-456M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435F17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-186D20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-429B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381E19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-102N02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-340P18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-340D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075J14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-079L10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-321G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176P10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-354L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194C19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-106M08.b	B6Ng01-106M08.g
ACC	DH914417	DH914418
length	1,176	1,126
definition	DH914417\|Mus musculus domesticus DNA, BAC clone: B6Ng01-106M08, 5' end.	DH914418\|Mus musculus domesticus DNA, BAC clone: B6Ng01-106M08, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(3,964,439 - 3,965,624)	(3,852,855 - 3,853,996)
sequence	gaattcacagttccctctgtctgcttctgtgtcctgggattatgggcata agctaccacacccaggtatattacacatttttggggtttttttttacact attttacttcaaattttttaactcaatttgcttactttcttattaaattg tccctgtgaattatgacagttgtctttctctccactgatgtcgtatatct ttttatatttacaatggttaggacttttggaaaatgctataaagcaacta acaaagtctcttctttcctgtgaggagttctactttgttccactattgac acttgaaaaatgggctttattttcctgcttaaaaatgtactatcttgtat caaatttactctaggttcctgaggtcttgcccacagggcaggacctgaga gacagcaaactggcagctcctcctgggctcactaagttccgtgtcttcca cttcaaacatgcttcactaggcgagcataagaaatgagcaattcctgtca tgccctgtctgcctccgcatggccacagccctggagaccttcacatgcca acactagggagactttctgtgaagtttctctttctcgttttatccaagta tattcaaataaagaagtcacacttcaagtgtattttgtttccactgaaaa gaaagcctatgtggctctatttatttaattttagtgagagacagtatcaa gagcagagcagctaacgttggagatcagatcctcccttatgtaaaaaaat taaaatgttgttgaacacctttggggtaattataacacatatttttcaaa acaattccatgtgtttagacatttaattagtaatttgaattacttgattc ttttaaaaatattatttatttttatgagcattgatgttttgcctgcagta tgtctgtgtgagggtgttagatcccctggaactggagttagacagttgtg agatgccatgtggggcactgggattgactggggccctcttgaaccaacca acactcttaccgctaagcatctctcagcctgaatttctgatcctattcag gttattaaagttatataaaagcaattcttctctgtatttgttataagatt gtcattggattaagtctatcagaaataaaggacaacatccccttgcttgt atttgaatgaaactgagctctgcatc	gaattcctaaattgataaaagaaatttcaaaccccatgtagattaaaagc tacagatagagctctgtaaagcttcatggctcatgcactaattgcatagg agaagaacaagtttggaacaaatttcgaatcatgccactatctggtaact aagggtcataagctggaatggacaatttagtgtaggttcaaggacaaaaa aaaaataagattgactagtttatctacataagacttcaaaataagacaca gggaagataattgtcctcttggcaaaaccacactaacttgtgacataaaa attattgtattaaacatataatgaacccatggtgccagaaaatagataag gaatgttcagtcaggtactagtcttaatggaaagacatgtgaacaattct gctgtaactctccctaaaaattatcaatctatggcatgatctattgcctt aaacttcttataaaattatggaatataaaagtgctcagaaaaccatgtta tcaattagtcccaagaaagtacaaaaactaagaaaaccaaaaaaagtggt ggtgtaacccttttctgcttaatccagtgtgcatgtgttctgtatgtctg actttcaaactctgagcctcttgcctaatcaaaacccaagagttaaagag taaagagcccaagttactgaattaattttcttaatcccctgttgctctca gcaagagttaaattgccagatttgctcctgaataccaaaagagttaaatt gccagaagccatcagcttttgacccatgctatgccaccttgctgcgtttc ttggctctgagcagattctggcacctggcatcctttgaacatgctgtgta gaccaggttgggccttggaactcacatatatctgcctgctttgcttcttc tttgatggctgggattaaatgtgggtgtccacatgcccattgttccacct cattttggagaaggtcttctactctcaaactgactagttagtgtctataa atgtgctctacccaaacccgtctgcactaggctatatgcaaacctacttg caagtaggtgctgagatgcagtcagatcctcacacttgcaggcactaatg actgaatcattactaactcccattct
quality values	Open. 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Hide. 61 47 61 49 61 49 49 49 33 28 28 52 52 59 59 59 59 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 59 61 59 59 59 59 59 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 55 55 61 59 59 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 59 61 61 59 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 49 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 52 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 43 61 61 43 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 53 43 61 61 61 61 42 53 57 57 53 57 53 53 47 57 53 57 57 57 53 57 57 53 53 52 57 57 57 57 57 57 50 57 57 57 53 45 57 47 53 57 57 57 57 53 45 53 57 53 53 57 57 53 57 57 52 47 53 53 53 53 57 57 47 47 57 47 47 53 45 57 47 35 35 38 57 57 52 57 50 53 50 57 57 53 53 38 38 57 39 30 57 45 53 50 50 41 52 57 47 30 32 52 50 40 45 57 57 47 53 45 53 52 50 50 52 57 57 57 39 53 30 53 46 28 50 45 42 50 26 38 50 45 47 38 57 26 41 32 32 57 39 45 52 47 33 46 32 36 28 10 57 53 34 47 38 37 52 37 52 50 39 39 30 44 52 15 57 57 53 37 53 25 33 34 24 57 39 27 53 40 28 40 23 27 57 37 31 37 52 21 37 40 29 35 31 37 57 57 53 37 33 29 57 36 24 35 48 44 37 35 42 36 23 37 29 20 28 20 30 40 34 47 40 30 23 37 57 37 40 41 23 37 40 29 41 36 37 32 26 8 32 36 14 44 23 39 29 29 33 36 21 23 26 31 32 30 30 29 24 36 28 32 13 51 47 29 38 29 20 23 32 36 29 34 31 24 32 28 39 24 29 19 29 22 21 22 11 34 22 51 25 29 29 24 26 18 29 16 30 23 34 34 22 25 28 33 35 29 23 29 29 29 29 17 29 25 30 23 46 51 17 22 20 29 28 25 14 30 28 20 39 29 29 25 9 34 23 15 18 17 46 9 17 22 33 28 51 10 12 29 14 39 51 46 20 31 11 9 5 5 26 14 24 28 26 46 33 23 26 25 29 21 9 16 15 14 40 15 14 28 23 26 39 51 24 25 10 16 5 30 30 25 33 12 23 14 5 6 19 8 20 30 29 22 20 21 51 19 23 21 28 20 19 24 21 16 14 30 17 10 32 9 6 9 9 51 8 18 34 24 15 25 12 17 33 12 26 30 23 28 33 17 13 51 14 14 51 27 31 24 22 15 28 18 9 12 26 16 25 30 19 27 23 10 5 13 25 25 24 44 30 12 21 16 35 9 6 16 13 18 17 14 28 16 21 31 30 8 16 23 8 8 18 35 23 15 25 6 8 4 7 10 4 6 5 5 22 15 18 13 6 12 5 22 10 10 17 18 7 22 12 16 5 3 4 1 5 20 9 11 22 11 17 9 5 5 17 7 13 21 9 6 25 7 15 6 5 6 21 26 6 5 6 20 8

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_3964439_3965624
seq2: B6Ng01-106M08.b_43_1218 (reverse)

seq1  GATGCAGGAAGCTCAGTTTTCATTCTAAGTACAAGCCAGGGGATGTTTGT  50
      |||||||  ||||||| |||||||| || ||||||| ||||||||||   
seq2  GATGCAG--AGCTCAG-TTTCATTC-AAATACAAGCAAGGGGATGTTGTC  46

seq1  CTTTATTTCTGAT-GACTTAATCCCATTGACAATCTTATATCAAATACAG  99
      ||||||||||||| |||||||| ||| ||||||||||||| |||||||||
seq2  CTTTATTTCTGATAGACTTAAT-CCAATGACAATCTTATAACAAATACAG  95

seq1  AGAGAATTTGCTTTTATAATAACTTATAATAACCTGAATAGGATCAAGAA  149
      |||  | |||||||||| ||||||| ||||||||||||||||||| ||||
seq2  AGAAGAATTGCTTTTAT-ATAACTT-TAATAACCTGAATAGGATC-AGAA  142

seq1  ATTCAGGCTGGAGAGATGGCTTAGCGGTTAAGAGTGTTGGTTGGTTCAAG  199
      ||||||||| ||||||| ||||||||| ||||||||||||||||||||||
seq2  ATTCAGGCT-GAGAGAT-GCTTAGCGG-TAAGAGTGTTGGTTGGTTCAAG  189

seq1  AGGGCCCCAGTTCAATTCCCAGTG-CCCACATGGCATCTCACAACTGTCT  248
      |||||||||| |||| |||||||| |||||||||||||||||||||||||
seq2  AGGGCCCCAG-TCAA-TCCCAGTGCCCCACATGGCATCTCACAACTGTCT  237

seq1  AACTCCAGTTCCAGGGGATCTAACACCCTCACACAGACATACTGCAGGCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCAGTTCCAGGGGATCTAACACCCTCACACAGACATACTGCAGGCA  287

seq1  AAACATCAATGCTCATAAAAATAAATAATATTTTTAAAAGAATCAAGTAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCAATGCTCATAAAAATAAATAATATTTTTAAAAGAATCAAGTAA  337

seq1  TTCAAATTACTAATT-AATGTCTAAACACATGGAATTGTTTTGAAAAATA  397
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTCAAATTACTAATTAAATGTCTAAACACATGGAATTGTTTTGAAAAATA  387

seq1  TGTGTTATAATTACCCCAAAGGTGTTCAACAACATTTTAATTTTTTTACA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTATAATTACCCCAAAGGTGTTCAACAACATTTTAATTTTTTTACA  437

seq1  TAAGGGAGGATCTGATCTCCAACGTTAGCTGCTCTGCTCTTGATACTGTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGAGGATCTGATCTCCAACGTTAGCTGCTCTGCTCTTGATACTGTC  487

seq1  TCTCACTAAAATTAAATAAATAGAGCCACATAGGCTTTCTTTTCAGTGGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTAAAATTAAATAAATAGAGCCACATAGGCTTTCTTTTCAGTGGA  537

seq1  AACAAAATACACTTGAAGTGTGACTTCTTTATTTGAATATACTTGGATAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATACACTTGAAGTGTGACTTCTTTATTTGAATATACTTGGATAA  587

seq1  AACGAGAAAGAGAAACTTCACAGAAAGTCTCCCTAGTGTTGGCATGTGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAGAAAGAGAAACTTCACAGAAAGTCTCCCTAGTGTTGGCATGTGAA  637

seq1  GGTCTCCAGGGCTGTGGCCATGCGGAGGCAGACAGGGCATGACAGGAATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCAGGGCTGTGGCCATGCGGAGGCAGACAGGGCATGACAGGAATT  687

seq1  GCTCATTTCTTATGCTCGCCTAGTGAAGCATGTTTGAAGTGGAAGACACG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTCTTATGCTCGCCTAGTGAAGCATGTTTGAAGTGGAAGACACG  737

seq1  GAACTTAGTGAGCCCAGGAGGAGCTGCCAGTTTGCTGTCTCTCAGGTCCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTAGTGAGCCCAGGAGGAGCTGCCAGTTTGCTGTCTCTCAGGTCCT  787

seq1  GCCCTGTGGGCAAGACCTCAGGAACCTAGAGTAAATTTGATACAAGATAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTGGGCAAGACCTCAGGAACCTAGAGTAAATTTGATACAAGATAG  837

seq1  TACATTTTTAAGCAGGAAAATAAAGCCCATTTTTCAAGTGTCAATAGTGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTTAAGCAGGAAAATAAAGCCCATTTTTCAAGTGTCAATAGTGG  887

seq1  AACAAAGTAGAACTCCTCACAGGAAAGAAGAGACTTTGTTAGTTGCTTTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTAGAACTCCTCACAGGAAAGAAGAGACTTTGTTAGTTGCTTTA  937

seq1  TAGCATTTTCCAAAAGTCCTAACCATTGTAAATATAAAAAGATATACGAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTTCCAAAAGTCCTAACCATTGTAAATATAAAAAGATATACGAC  987

seq1  ATCAGTGGAGAGAAAGACAACTGTCATAATTCACAGGGACAATTTAATAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGGAGAGAAAGACAACTGTCATAATTCACAGGGACAATTTAATAA  1037

seq1  GAAAGTAAGCAAATTGAGTTAAAAAATTTGAAGTAAAATAGTGTAAAAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTAAGCAAATTGAGTTAAAAAATTTGAAGTAAAATAGTGTAAAAAA  1087

seq1  AAACCCCAAAAATGTGTAATATACCTGGGTGTGGTAGCTTATGCCCATAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCAAAAATGTGTAATATACCTGGGTGTGGTAGCTTATGCCCATAA  1137

seq1  TCCCAGGACACAGAAGCAGACAGAGGGAACTGTGAATTC  1186
      |||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGACACAGAAGCAGACAGAGGGAACTGTGAATTC  1176

seq1: chr5_3852855_3853996
seq2: B6Ng01-106M08.g_69_1194

seq1  GAATTCCTAAATTGATAAAAGAAATTTCAAACCCCATGTAGATTAAAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAATTGATAAAAGAAATTTCAAACCCCATGTAGATTAAAAGC  50

seq1  TACAGATAGAGCTCTGTAAAGCTTCATGGCTCATGCACTAATTGCATAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATAGAGCTCTGTAAAGCTTCATGGCTCATGCACTAATTGCATAGG  100

seq1  AGAAGAACAAGTTTGGAACAAATTTCGAATCATGCCACTATCTGGTAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAACAAGTTTGGAACAAATTTCGAATCATGCCACTATCTGGTAACT  150

seq1  AAGGGTCATAAGCTGGAATGGACAATTTAGTGTAGGTTCAAGGACAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCATAAGCTGGAATGGACAATTTAGTGTAGGTTCAAGGACAAAAA  200

seq1  AAAAATAAGATTGACTAGTTTATCTACATAAGACTTCAAAATAAGACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAGATTGACTAGTTTATCTACATAAGACTTCAAAATAAGACACA  250

seq1  GGGAAGATAATTGTCCTCTTGGCAAAACCACACTAACTTGTGACATAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGATAATTGTCCTCTTGGCAAAACCACACTAACTTGTGACATAAAA  300

seq1  ATTATTGTATTAAACATATAATGAACCCATGGTGCCAGAAAATAGATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGTATTAAACATATAATGAACCCATGGTGCCAGAAAATAGATAAG  350

seq1  GAATGTTCAGTCAGGTACTAGTCTTAATGGAAAGACATGTGAACAATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTCAGTCAGGTACTAGTCTTAATGGAAAGACATGTGAACAATTCT  400

seq1  GCTGTAACTCTCCCTAAAAATTATCAATCTATGGCATGATCTATTGCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAACTCTCCCTAAAAATTATCAATCTATGGCATGATCTATTGCCTT  450

seq1  AAACTTCTTATAAAATTATGGAATATAAAAGTGCTCAGAAAACCATGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCTTATAAAATTATGGAATATAAAAGTGCTCAGAAAACCATGTTA  500

seq1  TCAATTAGTCCCAAGAAAGTACAAAAACTAAGAAAACCAAAAAAAGTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAGTCCCAAGAAAGTACAAAAACTAAGAAAACCAAAAAAAGTGGT  550

seq1  GGTGTAACCCTTTTCTGCTTAATCCAGTGTGCATGTGTTCTGTATGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAACCCTTTTCTGCTTAATCCAGTGTGCATGTGTTCTGTATGTCTG  600

seq1  ACTTTCAAACTCTGAGCCTCTTGCCTAATCAAAACCCAAGAGTTAAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAAACTCTGAGCCTCTTGCCTAATCAAAACCCAAGAGTTAAAGAG  650

seq1  TAAAGAGCCCAAGTTACTGAATTAATTTTCTTAATCCCCTGTTGCTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGCCCAAGTTACTGAATTAATTTTCTTAATCCCCTGTTGCTCTCA  700

seq1  GCAAGAGTTAAATTGCCAGATTTGCTCCTGAATACCAAAAGAGTTAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGTTAAATTGCCAGATTTGCTCCTGAATACCAAAAGAGTTAAATT  750

seq1  GCCAGAAGCCATCAGCTTTTGACCCATGCTATGCCACCTTGCTGCGTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAAGCCATCAGCTTTTGACCCATGCTATGCCACCTTGCTGCGTTTC  800

seq1  TTGGCTCTGAGCAGATTCTGGCACCTGGCATCCTTTGAACATGCTGTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCTGAGCAGATTCTGGCACCTGGCATCCTTTGAACATGCTGTGTA  850

seq1  GACCAGGTT-GGCCTTGGAACTCACATATATCTGCCTGCTTTGCTTCTTC  899
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGTTGGGCCTTGGAACTCACATATATCTGCCTGCTTTGCTTCTTC  900

seq1  TTTGATGGCTGGGATTAAATGTGGGTGTCACCATGCCCATTGTTTCCACC  949
      |||||||||||||||||||||||||||||  ||||||||||| |||||||
seq2  TTTGATGGCTGGGATTAAATGTGGGTGTCCACATGCCCATTG-TTCCACC  949

seq1  TCATTTTGGAGAAAGGGTCTCTTACTCTCAAACTGACTAGTTTAGTTGTC  999
      |||||||||||||  |||||  |||||||||||||||||| |||| ||||
seq2  TCATTTTGGAGAA--GGTCTTCTACTCTCAAACTGACTAG-TTAG-TGTC  995

seq1  TAATAAATGTGCCTCTACCCAAACCCGTCTGCACTAGGGCTATATGCAAA  1049
      | ||||||||| |||||||||||||||||||||||| |||||||||| ||
seq2  T-ATAAATGTG-CTCTACCCAAACCCGTCTGCACTA-GGCTATATGC-AA  1041

seq1  ACCTAACTTGCAAGTAGGTGCTGAGGATGCAAAGTCAGATCCTCACACTT  1099
      |||| ||||||||||||||||||| |||||  ||||||||||||||||||
seq2  ACCT-ACTTGCAAGTAGGTGCTGA-GATGC--AGTCAGATCCTCACACTT  1087

seq1  GCAGGCACTTTATTGACTGAGTCATTTACTTAACTCCCATCCT  1142
      ||||||||  || ||||||| ||| |||| |||||||||| ||
seq2  GCAGGCAC--TAATGACTGAATCA-TTAC-TAACTCCCATTCT  1126

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information