MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-109F11
Chromosome	5 (Build37)
Map Location	81,477,216 - 81,478,385
singlet/doublet	singlet
Overlap gene	Lphn3
Upstream gene	LOC100039506, LOC100039384
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039506 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 78 ESTs pseudo : _no_value

name	LOC100039384 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039384
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 102 ESTs, 1 Protein pseudo : _no_value

name	Lphn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319387 MGI:2441950
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lphn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130922 GeneID:319387 MGI:2441950
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : latrophilin 3 transcript_id : NM_198702.2

name	Lphn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037543 GeneID:319387 MGI:2441950
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : calcium-independent alpha-latrotoxin receptor homolog 3; lectomedin 3 product : latrophilin 3 protein_id : NP_941991.1

name	LOC100039506 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253986 GeneID:100039506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 78 ESTs product : similar to mitochondrial carrier homolog 2 pseudo : _no_value transcript_id : XR_030982.1

name	LOC100039384 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253983 GeneID:100039384
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 102 ESTs, 1 Protein product : similar to Mtch2 protein pseudo : _no_value transcript_id : XR_030957.1

clone name	MSMg01-419J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202F20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-293I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400A06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-289A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075E16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-109F11.b	B6Ng01-109F11.g
ACC	DH916274	DH916275
length	1,267	1,149
definition	DH916274\|Mus musculus domesticus DNA, BAC clone: B6Ng01-109F11, 5' end.	DH916275\|Mus musculus domesticus DNA, BAC clone: B6Ng01-109F11, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggcccatagctaaacataataagagcaatatatagcaaacca gtagccaatatcaaactaaatggagagaaacttgaagcaatcccactaaa atgagggactagagaatgctgtccattccctcacttcctgttcaatatag tactcaaagttctatcaagaacaattacaaaagaaaaagaaaaataaaag aaggtcaaacagatacaaattggaaaggaagaagtcaaaatatcactatt tgcagatgaatgataatatacttaagtgacccaaaaaattctaccagaga actcctaaatctgataaacaacttcatcaaagtggatggatataaaatta actcaaacaaatcatttgccttccttcctctactcaaagaataaacaggc tgagaaagaaattaggggaaaaaaacacctttcacaatagtcacaaataa tataaaaggtgttggtgtgactctaactaagcaagtgaaatatctatatg ataagaacttcaattctctgaagaaaaaaatggagaacatctcagaagat aaaaaaaatctcctgtgctcatggattgacaggattaatatagtaaaaat tgttcaccttgtcaaaagcaatctacaggtttaatgcaatccccatcaaa attacaaatcaagtcttcatagagttagaaatagcaatctgcaaataatt catttggaataataataatgataataataataataataataataataata ataataataataataataaaaacaggatagcgaaaactattttcaaagat agaagaaattctgggagaatgaccatgcttgacctgaagctgtactacag agcaattgtgatacaacctgcatggttttggtacaatgacagacaggaag atcaatggaatagaattgaagacccagaaatgaatccacaggcctatggt cattcgacctttgacaaagaagctaaaaccatccagtggaaaaaagacag cattttccacaaatgattctggttcaactggcagttagtatgtagaagat tgcaaatcattcattctatctcttatacaatctcaggtcaaatggatcag acctccaataaaatcagaatacactgaactaatagaaagaaggaggagtg ccttcagccatggcacaggagaaattctgacaagaaccaaagctatgtct aagatcacgatgcaatggatcctcatatgtcaagctcggtaggcaagaga acactgttccaatagca	gaattccatctaaaaatgaacaattaaaagtataatttttcccattttat gactacaatacaattctcagagataagaactacttcatgataatatgagt gtcttaaggagagggaggacacctccctactcatctgcaagcaaggccaa gacaaagaattatcaatttactcttacaatatgcacttatgatgtgcctg ttatgtgctaagttaaaattcagggaatacatttttaaagagaaagtatt tcatggtcctttagaaatgtaaaatataaaatcacagactatgaaagtat ttggctctgaagagctaagacaccaaaaaagattttacatttccattttt ctatttctctattgagaacgtaacaacttccattcacttggaggtgatag tagcaaagaaactttatatagtaggcactttagatttgtttgttttctcc cttctagcttctaaccagctccaaagaaagtaacactccaatttcatata aagttccctcctgacccaccttgagtcattgctgggtccttgaagtatga acaaaagtcatgtgttttgctgtcaaataaccaaagtaccattttctatt gtgtggttttgagcttaatcatcttagtgttgctatttgagttttatctg tgagccttaacaaggtcatataacatgaactaacgtcccctagtcacttc ccattgaaacctcaattttatttatgaggatcctagctagcttctctgtt gctatggtaaattcgtgaccccaagcaacttggagaggaaaagttcacta caccttattggacagagacctccttcaaatgaatccaagtcaggaattcc agcaggaacttggatacaagaaataagtgaaaacaaacaaaaacccaaac aaacaaacaaacaaaccaaacaaacaaacaaatgaaataaagtctctact ttatttcttgtagtgtcatggaggaacactatttactggctactaagcta ccattcttgtaatgccaaacccaatatctagaaacactcaacccatgtgt gccgggctcttcataattcatcgaaatcaagaaatttctcataaacatac caagccatctgatgaaagaaatccttaatgaagttctctcttccaggta
quality values	Open. Hide. 55 47 37 38 61 30 24 49 61 61 61 61 49 36 61 61 61 61 61 61 59 61 61 49 61 23 28 34 34 19 22 30 25 35 36 59 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 55 44 44 44 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 38 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 47 47 61 61 53 53 53 57 57 42 37 53 53 53 57 57 53 47 53 53 57 57 57 47 47 53 57 51 41 57 53 47 47 47 37 47 57 57 53 50 57 57 57 53 52 53 57 53 53 57 53 57 53 57 53 50 57 53 50 57 53 57 45 53 47 53 57 53 47 47 53 57 53 50 57 57 47 41 53 45 53 45 57 53 57 52 47 52 52 45 53 53 57 50 40 53 50 52 57 33 43 53 53 50 53 57 43 47 37 52 53 53 46 46 53 57 53 41 32 46 46 52 42 52 35 57 50 45 53 57 53 57 53 47 57 36 50 53 38 53 52 39 50 46 52 57 50 46 37 47 57 39 52 57 52 46 57 41 37 57 52 52 57 40 46 57 40 57 57 44 36 53 40 39 57 33 34 57 30 46 57 33 34 57 38 52 57 40 37 53 28 53 48 30 57 45 44 39 57 24 45 46 18 20 37 41 48 40 35 44 45 35 35 36 36 32 57 57 41 37 28 57 34 35 41 37 38 34 39 32 20 46 48 44 23 30 30 30 47 46 31 31 27 44 39 36 31 24 10 30 27 32 39 34 32 29 30 29 12 29 30 34 29 30 34 36 39 36 24 30 39 34 27 29 24 26 36 13 30 30 25 30 29 41 28 29 23 25 27 29 28 33 28 36 28 30 24 24 28 43 46 29 51 51 39 29 31 29 21 29 13 34 29 36 16 21 14 23 35 26 29 28 33 27 33 21 21 21 34 22 21 29 36 33 16 28 29 29 29 43 34 36 35 31 28 29 12 30 21 36 31 14 22 31 51 22 28 34 22 20 29 33 35 9 19 10 22 29 17 27 31 21 19 24 23 20 23 11 27 33 34 22 30 15 15 24 46 25 29 27 14 8 41 28 15 27 30 16 29 17 23 30 26 16 15 26 28 35 22 29 15 20 17 18 25 28 38 38 38 38 19 13 17 8 9 34 29 20 25 51 33 24 6 17 14 23 19 34 22 23 30 28 19 13 18 26 26 25 9 16 26 15 15 31 23 23 28 17 31 21 20 19 31 28 14 6 4 13 23 31 13 13 28 8 29 13 21 25 13 14 33 18 23 14 29 11 11 24 10 22 13 14 29 8 10 13 8 21 6 11 4 6 4 5 6 16 4 6 8 12 26 12 18 9 29 4 30 11 12 25 14 11 21 9 13 6 4 12 9 14 15 12 15 12 5 6 30 32 23 23 12 6 6 20 12 7 4 5 4 6 11 7 13 11 9 12 16 11 15 8 5 6 17 7 7 5 13 2 2 4 8 11 8 6 11 18 20 7 20 5 12 6 7 7 7 5 5 8 7 2 1 8 3 12 7 13 7 15 24 15 6 6 15 9 9 17 4 4 4 7 8 5 17 11 3 15 6 5 11 16 6 6 17 4 8 4 3 4 3 6 5 3 7 9 5 17 7 5 3 3 11 5 16 13 3 4 14 6 5 3 4 3 4 3 3 3 8 10 13 8 9 11 4 4 5 6 6 4 16 8 19 9 4 4 6 5 4 9 6 4 11 10 4 8 4 2 3 2 7 4 4 1 3	Open. Hide. 61 61 61 59 61 24 28 19 28 28 19 13 23 18 24 22 59 59 59 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 55 61 61 61 61 61 61 59 61 61 61 59 61 61 59 61 59 55 35 35 35 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 44 55 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 50 61 61 61 61 61 61 61 61 61 53 47 57 57 53 57 57 57 57 53 52 57 53 57 57 57 57 53 53 53 53 57 57 57 53 50 57 47 57 50 53 53 53 47 57 50 57 57 57 57 57 47 36 57 57 53 53 52 57 53 53 38 47 47 53 31 57 57 57 50 47 52 57 52 51 52 57 57 53 52 53 52 57 57 34 57 33 57 29 15 57 57 57 53 53 50 53 53 53 47 57 53 53 42 53 53 53 53 53 52 52 52 39 53 52 42 52 50 45 57 57 53 53 40 36 57 57 50 52 53 53 53 41 42 52 52 32 47 33 50 52 37 52 50 35 38 47 52 17 40 40 48 37 37 37 52 37 37 38 53 52 53 37 31 28 57 52 39 34 29 57 57 53 37 40 33 40 40 34 42 43 53 34 57 41 35 53 37 53 40 45 44 40 31 40 37 24 37 30 57 57 43 29 29 57 53 29 40 33 48 18 40 30 27 34 47 30 47 25 30 32 30 35 41 29 33 31 30 35 30 25 12 30 29 27 39 30 29 18 44 24 44 51 48 30 43 44 31 29 29 29 25 51 51 46 28 36 29 29 30 34 29 25 47 29 33 21 15 47 20 30 31 51 51 8 9 5 38 31 28 34 31 28 30 22 26 25 20 46 27 23 30 29 32 21 21 30 35 34 23 26 19 29 29 23 38 15 51 28 27 46 29 29 34 27 24 29 28 43 26 29 29 29 28 34 33 24 28 27 28 27 20 39 23 28 29 28 13 33 15 20 26 20 36 23 32 15 27 24 26 18 30 12 29 51 29 21 32 21 26 28 34 29 46 46 41 26 20 38 25 29 29 51 42 36 32 20 36 29 16 36 29 24 17 36 24 27 21 41 25 29 24 46 23 29 40 38 30 16 28 17 38 15 21 19 51 19 29 17 51 19 33 30 51 38 28 34 26 51 28 26 22 36 24 24 25 34 31 30 29 26 29 28 51 25 22 21 51 28 11 5 17 32 16 28 14 19 34 33 13 18 21 19 23 32 16 14 26 7 11 13 13 17 23 23 39 20 11 27 25 24 11 4 9 23 22 17 20 30 25 31 31 31 30 28 18 33 14 22 23 18 25 12 29 24 19 32 12 19 22 31 15 12 34 6 4 4 13 13 17 15 20 12 9 4 19 9 5 6 12 7 6 10 9 12 29 12 4 5 3 1 6 3 5 6 8 15 33 12 4 9 9 7 9 10 3 4 5 4 4 5 21 6 23 7 5 8 26 20 12 9 10 5 5 15 30 18 5 21 22 5 5 9 10 7 14 27 6 11 5 7 5 20 5 2 2 4 4 7 5 6 6 12 13 7 5 11 23 26 5 4 22 25 18 7 13 5 13 4 8 7 7 8 6 5 18 6 4 6 8 12 4 5 7 4 9 18 6 15 9 2 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_81477216_81478385
seq2: B6Ng01-109F11.g_68_1216 (reverse)

seq1  TACCTGGGAAGAGAGAACCTCAATTAAGGATTTTCTTTCATCAGATAGGC  50
      ||||| |||||||||||| || |||||||| ||||||||||||||| |||
seq2  TACCT-GGAAGAGAGAACTTC-ATTAAGGA-TTTCTTTCATCAGAT-GGC  46

seq1  CTATGGGTATGTTTATGAGAAATTTTCTTGATTTCTGATGGATGTATG-A  99
         | ||||||||||||||||| |||||||||||| |||| || |||| |
seq2  ---TTGGTATGTTTATGAGAAA-TTTCTTGATTTC-GATGAAT-TATGAA  90

seq1  GAGCCCGGCACACTATGGGTTGAGTGTTTCCTAGATATTTGGGTTTGGCA  149
      ||||||||||||| ||||||||||||||| ||||||| ||||||||||||
seq2  GAGCCCGGCACAC-ATGGGTTGAGTGTTT-CTAGATA-TTGGGTTTGGCA  137

seq1  TTTACAAGAATGGTAGCTTAGTAGGCCAGTAAATAGTGTTCCTCCATGAA  199
       |||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  -TTACAAGAATGGTAGCTTAGTA-GCCAGTAAATAGTGTTCCTCCATG-A  184

seq1  CACTACAAGAAATAAAGTAGAGACTTTATTTCATTTTGTTTGTTTGTTTG  249
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CACTACAAGAAATAAAGTAGAGACTTTATTTCA-TTTGTTTGTTTGTTTG  233

seq1  GTTTTGTTTGTTTGTTTGTTTGGGTTTTTTGTTTGTTTTTCACTTTATTT  299
      | |||||||||||||||||||||| |||||||||| ||||||| ||||||
seq2  G-TTTGTTTGTTTGTTTGTTTGGG-TTTTTGTTTG-TTTTCAC-TTATTT  279

seq1  CTTGTATCCAAGTTCCTGCTGGAATTCCTGACTTGGATTCATTTGAAGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATCCAAGTTCCTGCTGGAATTCCTGACTTGGATTCATTTGAAGGA  329

seq1  GGTCTCTGTCCAATAAGGTGTAGTGAACCTTTTCCTCTCCAAGTTGCTTG  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGTCTCTGTCCAATAAGGTGTAGTGAA-CTTTTCCTCTCCAAGTTGCTTG  378

seq1  GGGTCACGAATTTACCATAGCAACAGAGAAGCTAGCTAGGATCCTCATAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACGAATTTACCATAGCAACAGAGAAGCTAGCTAGGATCCTCATAA  428

seq1  ATAAAATTGAGGTTTCAATGGGAAGTGACTAGGGGACGTTAGTTCATGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTGAGGTTTCAATGGGAAGTGACTAGGGGACGTTAGTTCATGTT  478

seq1  ATATGACCTTGTTAAGGCTCACAGATAAAACTCAAATAGCAACACTAAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACCTTGTTAAGGCTCACAGATAAAACTCAAATAGCAACACTAAGA  528

seq1  TGATTAAGCTCAAAACCACACAATAGAAAATGGTACTTTGGTTATTTGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAGCTCAAAACCACACAATAGAAAATGGTACTTTGGTTATTTGAC  578

seq1  AGCAAAACACATGACTTTTGTTCATACTTCAAGGACCCAGCAATGACTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAACACATGACTTTTGTTCATACTTCAAGGACCCAGCAATGACTCA  628

seq1  AGGTGGGTCAGGAGGGAACTTTATATGAAATTGGAGTGTTACTTTCTTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGTCAGGAGGGAACTTTATATGAAATTGGAGTGTTACTTTCTTTG  678

seq1  GAGCTGGTTAGAAGCTAGAAGGGAGAAAACAAACAAATCTAAAGTGCCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGTTAGAAGCTAGAAGGGAGAAAACAAACAAATCTAAAGTGCCTA  728

seq1  CTATATAAAGTTTCTTTGCTACTATCACCTCCAAGTGAATGGAAGTTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAAAGTTTCTTTGCTACTATCACCTCCAAGTGAATGGAAGTTGTT  778

seq1  ACGTTCTCAATAGAGAAATAGAAAAATGGAAATGTAAAATCTTTTTTGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTCTCAATAGAGAAATAGAAAAATGGAAATGTAAAATCTTTTTTGGT  828

seq1  GTCTTAGCTCTTCAGAGCCAAATACTTTCATAGTCTGTGATTTTATATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGCTCTTCAGAGCCAAATACTTTCATAGTCTGTGATTTTATATTT  878

seq1  TACATTTCTAAAGGACCATGAAATACTTTCTCTTTAAAAATGTATTCCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCTAAAGGACCATGAAATACTTTCTCTTTAAAAATGTATTCCCT  928

seq1  GAATTTTAACTTAGCACATAACAGGCACATCATAAGTGCATATTGTAAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTAACTTAGCACATAACAGGCACATCATAAGTGCATATTGTAAGA  978

seq1  GTAAATTGATAATTCTTTGTCTTGGCCTTGCTTGCAGATGAGTAGGGAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTGATAATTCTTTGTCTTGGCCTTGCTTGCAGATGAGTAGGGAGG  1028

seq1  TGTCCTCCCTCTCCTTAAGACACTCATATTATCATGAAGTAGTTCTTATC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCCCTCTCCTTAAGACACTCATATTATCATGAAGTAGTTCTTATC  1078

seq1  TCTGAGAATTGTATTGTAGTCATAAAATGGGAAAAATTATACTTTTAATT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAATTGTATTGTAGTCATAAAATGGGAAAAATTATACTTTTAATT  1128

seq1  GTTCATTTTTAGATGGAATTC  1170
      |||||||||||||||||||||
seq2  GTTCATTTTTAGATGGAATTC  1149

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information