BAC Information

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BAC

Clone NameB6Ng01-109H19
Chromosome5 (Build37)
Map Location 18,415,975 - 18,416,901
singlet/doubletsinglet
Overlap genenone
Upstream geneGnat3, Gnai1, LOC100041818, LOC668167
Downstream gene4921504A21Rik, Magi2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109H19.bB6Ng01-109H19.g
ACCDH916382DH916383
length1,0441,177
definitionDH916382|Mus musculus domesticus DNA, BAC clone: B6Ng01-109H19, 5' end.DH916383|Mus musculus domesticus DNA, BAC clone: B6Ng01-109H19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctatcaatatcttcctcaagtgtcttaacacaggacctctaaa
tgaaccaggagcttattcattgttctggctcagtgagatggctgtaggac
ttcaaaatctgcctgtttatcattacatatacctgattttaactgagatc
tttatacttgcacagcatccttaccattctgcaaatgggtgaagcaatga
cttgctgtctggagttttgttttgcttgattttgtttttactgcgatatt
gttaactattaatacatggttaagttgttcctccttttactgttcaaaat
agagtggatccaaatacagggcaggaaactcactgttgtaaaaggagttt
aaaaattacattcctgaatgggcaaacaatacttccatagaaaatagggt
ttattatatgaaaatctctgcaaggcattgttggtcagggtgaccctatt
agtgccccaaacagcactggttattatcatccctcttggtcacccatctt
aactagggtgaaaacacttactttagtgatatcacttacttttggttaag
gtcatagaaaaattaagttgaaagtgaattgaaaacatcctccctgctat
gtttgccatttggagagaaaatacattaatattctaaacactgctggatt
cccaaatgctacaacactaatctgccagacaagatgtgttggataatata
acagtagtagaaaagctatgaggataaccagcctctttgtgatttgctcc
caggacagagttcatgcatgggtgagcatagacatgtctgtgtttccata
gattatcagttctagggcaattcctaatacttttgttttatgaaacagac
aagctaaccaactgccttctaaattatggggcttttatcagttgatgagt
acagtcttggcccatgaagcttctttctgcagtagaatagctcataactg
gtcaaagtggttagaatacatgactcttgatgttcagtataatatgacat
tcatatcatcccatccaaggctcaaggaacatcatgtgcatgga
gaattcagtgaacaacttgttatggggagagaagagtgatgagggaatat
gaagcaagatagctaaaatttaagacacaatgatgaatattttggaagtc
taattcagtagaattgttgcaaagtatgttcatatatgaagtctacctga
aattgtcaaataatgggggtgactaagcaccaattgaccatttcttgtca
ccaaatatagtttcctgtatcagaattgggttactttttgttgagctgtt
gtctaaaaatgtaccttgggaattcccaaacaacccaagggatttccaag
actgtagattgctttccacaaattgactgatggcaaggctctattgctaa
aatcaatgtttgcacaactcattagacatggaggccttgaggttgtgcat
atacatcacctttatttctatggtctagcatctttgtataacaaaataac
ctgactactactgataaaaaattataaacaccaatatagccacaaacatt
tgatgttctgactgtaagatatgttagagcaatattggtacaaagtatgt
aggtgttaccaaccaatatctgattttatttaaggcctactccataaaat
gaaattcatctttgacactgctgggaatgacgaagaacctgagactatat
agccaagtgatgtagggggacaaccaaatattacttttctgttaaaagaa
cataacaataaaatgacacctactgatggttctgtagtacttatgatcag
tgtcttgctcagctatgaatgggatgcctctatcagatcctccttcaggg
ctcagtgaaaacagtatatgaatcagaggagatagaagacgtcaaagaca
gggccctctaaatcaacattgtgaaagcacatatgaactcacagagatga
ggcagcatgctaagcttcagggatcagtagcagatcatttgcatgtgtat
tatgacttctagttagagtttttatgggtctgatgtaaaactagttctga
ttctgtgcctttctgactttcggttggtgttttgttaattaaggtgttcc
ttttttatcaatagcagcctttaatcccttatatgttggttataatatct
aagcctggttgttccgagagacgaatggaatctccgttaaggctatgatt
agagaaccgtgcaagagatagtgaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_18415975_18416901
seq2: B6Ng01-109H19.b_45_971

seq1  GAATTCTCTATCAATATCTTCCTCAAGTGTCTTAACACAGGACCTCTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATCAATATCTTCCTCAAGTGTCTTAACACAGGACCTCTAAA  50

seq1  TGAACCAGGAGCTTATTCATTGTTCTGGCTCAGTGAGATGGCTGTAGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAGGAGCTTATTCATTGTTCTGGCTCAGTGAGATGGCTGTAGGAC  100

seq1  TTCAAAATCTGCCTGTTTATCATTACATATACCTGATTTTAACTGAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATCTGCCTGTTTATCATTACATATACCTGATTTTAACTGAGATC  150

seq1  TTTATACTTGCACAGCATCCTTACCATTCTGCAAATGGGTGAAGCAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTTGCACAGCATCCTTACCATTCTGCAAATGGGTGAAGCAATGA  200

seq1  CTTGCTGTCTGGAGTTTTGTTTTGCTTGATTTTGTTTTTACTGCGATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGTCTGGAGTTTTGTTTTGCTTGATTTTGTTTTTACTGCGATATT  250

seq1  GTTAACTATTAATACATGGTTAAGTTGTTCCTCCTTTTACTGTTCAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTATTAATACATGGTTAAGTTGTTCCTCCTTTTACTGTTCAAAAT  300

seq1  AGAGTGGATCCAAATACAGGGCAGGAAACTCACTGTTGTAAAAGGAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGATCCAAATACAGGGCAGGAAACTCACTGTTGTAAAAGGAGTTT  350

seq1  AAAAATTACATTCCTGAATGGGCAAACAATACTTCCATAGAAAATAGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTACATTCCTGAATGGGCAAACAATACTTCCATAGAAAATAGGGT  400

seq1  TTATTATATGAAAATCTCTGCAAGGCATTGTTGGTCAGGGTGACCCTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATATGAAAATCTCTGCAAGGCATTGTTGGTCAGGGTGACCCTATT  450

seq1  AGTGCCCCAAACAGCACTGGTTATTATCATCCCTCTTGGTCACCCATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCCCAAACAGCACTGGTTATTATCATCCCTCTTGGTCACCCATCTT  500

seq1  AACTAGGGTGAAAACACTTACTTTAGTGATATCACTTACTTTTGGTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGGTGAAAACACTTACTTTAGTGATATCACTTACTTTTGGTTAAG  550

seq1  GTCATAGAAAAATTAAGTTGAAAGTGAATTGAAAACATCCTCCCTGCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAGAAAAATTAAGTTGAAAGTGAATTGAAAACATCCTCCCTGCTAT  600

seq1  GTTTGCCATTTGGAGAGAAAATACATTAATATTCTAAACACTGCTGGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCATTTGGAGAGAAAATACATTAATATTCTAAACACTGCTGGATT  650

seq1  CCCAAATGCTACAACACTAATCTGCCAGACAAGATGTGTTGGATAATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATGCTACAACACTAATCTGCCAGACAAGATGTGTTGGATAATATA  700

seq1  ACAGTAGTAGAAAAGCTATGAGGATAACCAGCCTCTTTGTGATTTGCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGTAGAAAAGCTATGAGGATAACCAGCCTCTTTGTGATTTGCTCC  750

seq1  CAGGACAGAGTTCATGCATGGGTGAGCATAGACATGTCTGTGTTTCCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGAGTTCATGCATGGGTGAGCATAGACATGTCTGTGTTTCCATA  800

seq1  GATTATCAGTTCTAGGGCAATTCCTAATACTTTTGTTTTATGAAACAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATCAGTTCTAGGGCAATTCCTAATACTTTTGTTTTATGAAACAGAC  850

seq1  AAGCTAACCAACTGCCTTCTAAATTATGGGGCTTTTATCAGTTGATGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAACCAACTGCCTTCTAAATTATGGGGCTTTTATCAGTTGATGAGT  900

seq1  ACAGTCTTGGCCCATGAAGCTTCTTTC  927
      |||||||||||||||||||||||||||
seq2  ACAGTCTTGGCCCATGAAGCTTCTTTC  927