BAC Information

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BAC

Clone NameB6Ng01-116B10
Chromosome5 (Build37)
Map Location 90,662,156 - 90,663,288
singlet/doubletsinglet
Overlap geneAnkrd17
Upstream geneSlc4a4, Gc, LOC622870, Npffr2, LOC631105, Adamts3, EG665733, Cox18
Downstream geneAlb1, Afp, Afm, LOC100040105, LOC622307, Rassf6, Cxcl5, Ppbp, Cxcl4, Gm1960, Cxcl15, Cxcl1, Cxcl2, 1110019K23Rik, Epgn, Ereg, Areg
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116B10.bB6Ng01-116B10.g
ACCDH921179DH921180
length1,1291,152
definitionDH921179|Mus musculus domesticus DNA, BAC clone: B6Ng01-116B10, 5' end.DH921180|Mus musculus domesticus DNA, BAC clone: B6Ng01-116B10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaagtaatattaaatctcagctatcctcagaaaaactaaaatt
tggttttgcaaaattaaatattttacagagtacctgtataatatttcaaa
atatcctttttcagagtctccagcacagtctgtatcctctggagttcgtg
caccgtctcctgccccatcctcagtacctttagggtctgaaaagcccagc
agtgtctctcaggacaggaaagtaccagtcccaattgggactgagcgttc
tgcacggatcaggcaaactggaacttcagctccatctgttattgggagta
atttgtctacatcagtaggacatagtggcatctggtcctttgaagggatt
ggtggcaatcaaggtatgatatgctgtatattactggaaatgaagtttat
tcatttagctaaatattttaatcagtttcacattcacttaattttttgag
attttacttttttggtttttcgagacagggtttctctgtatagccttggc
tgtcctggaattcactctgtagaccaggctggcctcgaactcagaaatct
gcctgcctctgcctccagagtgctgggattaaaggcggcatgcaccatca
cgcccaatgagattttacttttatgtgtggtgtttttcctgcatatgtgt
ctatgcaacactcatatgcctggtgtgtgaggagactagatgagagcatt
gaatcccctgaaactggagatgcagccagttgttagctgccatctgggtg
ctgggaatggaaccatctgtctagccctcatcattcctttaaaggatctc
tattcctgtctcttcagttagactaatcttctcttagttctggtttcatg
tgctctttccctctgcacttactcatctcttaaaataatctaatgacgta
aacaatattgggtttattaagagtctctgtagaccgttgaatccttgaac
taactatgtcgatggatgaggctagccttgaccctggtctttgccttcac
gtcccagtacttgattgcagtttttgctatctgccctacagaagtctctt
gtattttcattttgccatattaggttgttggtgtttcctttgagacgttt
tggcttcttcataggctttgatttccttt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtccaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttctttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaattccctaaacacatgaagctcaag
aaaaatgaagactgaagtttggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacggtgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgctggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggagagctagagaagtacccaagagctaaagggatctgcaccctatagg
tggacacattatgactaccagtacctgagctctgactctagctgcatatg
tatcaaagatgctagtcgcatcactggaagagagccattgaattgcaaac
ttatatgcccagtacaggtaagccagggccaaagggggagtgtgtgtggt
ta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_90662156_90663288
seq2: B6Ng01-116B10.b_46_1174 (reverse)

seq1  AAAGAAAATCAAAG-CTATGAAGAAGCCAAAACGTCTCAAAGGAAACACC  49
      |||| ||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAGGAAATCAAAGCCTATGAAGAAGCCAAAACGTCTCAAAGGAAACACC  50

seq1  AACATCTTAATATGGCAAAATGAAAATACAAGGAGACTTCTGTAGGGCAA  99
      |||| | |||||||||||||||||||||||| |||||||||||||||| |
seq2  AACAACCTAATATGGCAAAATGAAAATACAA-GAGACTTCTGTAGGGC-A  98

seq1  GATAGCAAACACCTGCAATCAAGTACTGGGACGTGAAGGCAAAAGGACCA  149
      ||||||||| | |||||||||||||||||||||||||||||||  |||||
seq2  GATAGCAAA-AACTGCAATCAAGTACTGGGACGTGAAGGCAAA--GACCA  145

seq1  GGGTCAAGGCTAGCCTCATCCATCGACATAGTTAGTTCAAGGATTCAACG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAAGGCTAGCCTCATCCATCGACATAGTTAGTTCAAGGATTCAACG  195

seq1  GTCTACAGGAGACTCTTAATAAA-CCAATATTGTTTACGTCATTAGATTA  248
      ||||||| ||||||||||||||| ||||||||||||||||||||||||||
seq2  GTCTACA-GAGACTCTTAATAAACCCAATATTGTTTACGTCATTAGATTA  244

seq1  TTTTAAGAGATGAGTAAGTGCAGAGGGAAAGAGCACATGAAACCAGAACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGAGATGAGTAAGTGCAGAGGGAAAGAGCACATGAAACCAGAACT  294

seq1  AAGAGAAGATTAGTCTAACTGAAGAGACAGGAATAGAGATCCTTTAAAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGATTAGTCTAACTGAAGAGACAGGAATAGAGATCCTTTAAAGG  344

seq1  AATGATGAGGGCTAGACAGATGGTTCCATTCCCAGCACCCAGATGGCAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGAGGGCTAGACAGATGGTTCCATTCCCAGCACCCAGATGGCAGC  394

seq1  TAACAACTGGCTGCATCTCCAGTTTCAGGGGATTCAATGCTCTCATCTAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACTGGCTGCATCTCCAGTTTCAGGGGATTCAATGCTCTCATCTAG  444

seq1  TCTCCTCACACACCAGGCATATGAGTGTTGCATAGACACATATGCAGGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCACACACCAGGCATATGAGTGTTGCATAGACACATATGCAGGAA  494

seq1  AAACACCACACATAAAAGTAAAATCTCATTGGGCGTGATGGTGCATGCCG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCACACATAAAAGTAAAATCTCATTGGGCGTGATGGTGCATGCCG  544

seq1  CCTTTAATCCCAGCACTCTGGAGGCAGAGGCAGGCAGATTTCTGAGTTCG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCCCAGCACTCTGGAGGCAGAGGCAGGCAGATTTCTGAGTTCG  594

seq1  AGGCCAGCCTGGTCTACAGAGTGAATTCCAGGACAGCCAAGGCTATACAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCCTGGTCTACAGAGTGAATTCCAGGACAGCCAAGGCTATACAG  644

seq1  AGAAACCCTGTCTCGAAAAACCAAAAAAGTAAAATCTCAAAAAATTAAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCCTGTCTCGAAAAACCAAAAAAGTAAAATCTCAAAAAATTAAGT  694

seq1  GAATGTGAAACTGATTAAAATATTTAGCTAAATGAATAAACTTCATTTCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGAAACTGATTAAAATATTTAGCTAAATGAATAAACTTCATTTCC  744

seq1  AGTAATATACAGCATATCATACCTTGATTGCCACCAATCCCTTCAAAGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATACAGCATATCATACCTTGATTGCCACCAATCCCTTCAAAGGA  794

seq1  CCAGATGCCACTATGTCCTACTGATGTAGACAAATTACTCCCAATAACAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGCCACTATGTCCTACTGATGTAGACAAATTACTCCCAATAACAG  844

seq1  ATGGAGCTGAAGTTCCAGTTTGCCTGATCCGTGCAGAACGCTCAGTCCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCTGAAGTTCCAGTTTGCCTGATCCGTGCAGAACGCTCAGTCCCA  894

seq1  ATTGGGACTGGTACTTTCCTGTCCTGAGAGACACTGCTGGGCTTTTCAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGACTGGTACTTTCCTGTCCTGAGAGACACTGCTGGGCTTTTCAGA  944

seq1  CCCTAAAGGTACTGAGGATGGGGCAGGAGACGGTGCACGAACTCCAGAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAAGGTACTGAGGATGGGGCAGGAGACGGTGCACGAACTCCAGAGG  994

seq1  ATACAGACTGTGCTGGAGACTCTGAAAAAGGATATTTTGAAATATTATAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGACTGTGCTGGAGACTCTGAAAAAGGATATTTTGAAATATTATAC  1044

seq1  AGGTACTCTGTAAAATATTTAATTTTGCAAAACCAAATTTTAGTTTTTCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTCTGTAAAATATTTAATTTTGCAAAACCAAATTTTAGTTTTTCT  1094

seq1  GAGGATAGCTGAGATTTAATATTACTTTTGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  GAGGATAGCTGAGATTTAATATTACTTTTGAATTC  1129