BAC Information

Click to search

BAC

Clone NameB6Ng01-129P06
Chromosome5 (Build37)
Map Location 62,136,914 - 62,227,021
singlet/doubletdoublet
Overlap geneLOC100041524, G6pd2
Upstream geneLOC666597, EG666610
Downstream geneLOC100041543, Centd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129P06.bB6Ng01-129P06.g
ACCDH931404DH931405
length9821,097
definitionDH931404|Mus musculus domesticus DNA, BAC clone: B6Ng01-129P06, 5' end.DH931405|Mus musculus domesticus DNA, BAC clone: B6Ng01-129P06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,136,914 - 62,137,521)(62,225,891 - 62,227,021)
sequence
gaattcaagaaaatattatagtctaaaaaagataaaatgggtatttgtat
ttctttacatcatatttaagaaattgtttatttagtggatacaccaacaa
acatattttgtacccaacatcaatgtaaatagtgagaagttggaagcaat
cccactaaaatcagggactagagaaggctgcccactttctcactacctat
tcactattgtacttgaagtactaaccagagcaattcgacaacaagaggag
atcaaggggatacaaattggaaaggaagaagtcaaaatatcactttttac
agataatatgatagtatatataagtgaccctaaaaattccaccagagaac
tccaaagtctgataaacagcttcaatgctgggtttaccctttatataaag
actactgatttgtttgagttaattttatatacagccactattctgaaatt
gtttatcaattgtaggagttctctgatggaattttggatgttggttatgt
catgtatattaccatatcctccacagatagtggtatttagatttttttcc
tttgcaatgtatatctccttgatctccttttgttgttctagctatacaat
ctagtattatattgaatatatagtgagaaaatgtcagccttgtcttttct
ctgattttagtgggattgattctagtttctcttcatttaatttgatgttg
tctgttggtttgctgtatattgcttttattatgttaggtatgtaatttgg
attcctgatttctcaaatctttttaaaatgaaagggtgttatattttgtc
aaaggctttcacaacatctaatgagatgatcatgtgactatttctgtgaa
tttgtttatatagtgatttaatgtttttggattttagtacattgaacctt
ccagacaactctgggatgaaacctgattttgatatgttcttgtattgaat
tacagaattttattgatattttttgcatgata
gaattctcctacacttgggcatcaagcatttcccaggtcccaaaacctct
cctcccattgatacactacaaggacatcctctgctacatatgtggctggt
gccatggattgctcctgtgtactctgattggtagtttagtccctgggagt
tctggaaggcatggttggtagatattgttgttcttcctatggggttgaaa
atcccttcagttcctttcagtactttcctccattggggacttgtggggca
ggtcttcatccatggttttgctttctttcttttttttttttgtatgtttt
cactgctttacagagtgctgacttcactgtacagatgtattttttgttgt
atattctttgtaccactttctataaaagctagctcaaatttcaacttaaa
tcaccattgaaataatcaataaatttagcatctatacacaatgaataata
ttcataatggcatcctctagtccatgttgatacagttgggtctggaggat
attagaggtagagttgaaaataaaaagatgccatgacctcattattagaa
tcagaaattttcttcattcctgcatcatggtttacagtcagacaatttac
caaggattgtaagggagggagtagaaatatatttaattacaaagaacaca
aggtcattttaattttacttaatttgtaatgaagcttccatccacttatg
ctagatatcataaaaccattgtatatattcttattccaaactctaacagc
tgttctgaagtaaacattgtaacccatacactttctggcaaagggagcaa
ggaaacagaaacaaaatggtttgatcaactgggcaagggcttggaaaact
tcatttttttcttgtaaatctatgaccttagtgtttatgaaatgcaatac
ttaataaaagcaagatgaaatatcatgtactattttgtgctttaaatatc
ccctctaatctcaataatcatcttgctcgaagcagtaaatatgagataac
ttatcttataatctcaattggtccaccatcagtttatattttgcttcatg
acataatttattaattatggagattgtacaggcatccgatcaccttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_62136914_62137521
seq2: B6Ng01-129P06.b_49_656

seq1  GAATTCAAGAAAATATTATAGTCTAAAAAAGATAAAATGGGTATTTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAAATATTATAGTCTAAAAAAGATAAAATGGGTATTTGTAT  50

seq1  TTCTTTACATCATATTTAAGAAATTGTTTATTTAGTGGATACACCAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTACATCATATTTAAGAAATTGTTTATTTAGTGGATACACCAACAA  100

seq1  ACATATTTTGTACCCAACATCAATGTAAATAGTGAGAAGTTGGAAGCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTTGTACCCAACATCAATGTAAATAGTGAGAAGTTGGAAGCAAT  150

seq1  CCCACTAAAATCAGGGACTAGAGAAGGCTGCCCACTTTCTCACTACCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTAAAATCAGGGACTAGAGAAGGCTGCCCACTTTCTCACTACCTAT  200

seq1  TCACTATTGTACTTGAAGTACTAACCAGAGCAATTCGACAACAAGAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATTGTACTTGAAGTACTAACCAGAGCAATTCGACAACAAGAGGAG  250

seq1  ATCAAGGGGATACAAATTGGAAAGGAAGAAGTCAAAATATCACTTTTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGGGATACAAATTGGAAAGGAAGAAGTCAAAATATCACTTTTTAC  300

seq1  AGATAATATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAAC  350

seq1  TCCAAAGTCTGATAAACAGCTTCAATGCTGGGTTTACCCTTTATATAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGTCTGATAAACAGCTTCAATGCTGGGTTTACCCTTTATATAAAG  400

seq1  ACTACTGATTTGTTTGAGTTAATTTTATATACAGCCACTATTCTGAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGATTTGTTTGAGTTAATTTTATATACAGCCACTATTCTGAAATT  450

seq1  GTTTATCAATTGTAGGAGTTCTCTGATGGAATTTTGGATGTTGGTTATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCAATTGTAGGAGTTCTCTGATGGAATTTTGGATGTTGGTTATGT  500

seq1  CATGTATATTACCATATCCTCCACAGATAGTGGTATTTAGATTTTTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATATTACCATATCCTCCACAGATAGTGGTATTTAGATTTTTTTCC  550

seq1  TTTGCAATGTATATCTCCTTGATCTCCTTTTGTTGTTCTAGCTATACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAATGTATATCTCCTTGATCTCCTTTTGTTGTTCTAGCTATACAAT  600

seq1  CTAGTATT  608
      ||||||||
seq2  CTAGTATT  608

seq1: chr5_62225891_62227021
seq2: B6Ng01-129P06.g_67_1163 (reverse)

seq1  GAAGTGTGATCGAGATGCCTTGTACAAAATTCTCCAATAATTAATAAAAT  50
      |||| ||||||| |||||| |||||||   ||||| |||||||||||   
seq2  GAAG-GTGATCG-GATGCC-TGTACAA---TCTCC-ATAATTAATAA---  40

seq1  ATTATGTCATGGGAAAGCAAAAATATAAAAACTGATGTGTGATACAAATT  100
      |||||||||||   |||||||   ||| ||||||||| |||  || ||||
seq2  ATTATGTCATG---AAGCAAA---ATATAAACTGATG-GTG-GACCAATT  82

seq1  GAGATTATTTAAGATAAGTTATCTCCATATTTTACTGCTCTGAGCAAGAA  150
      |||||||  ||||||||||||||| |||| |||||||||  ||||||| |
seq2  GAGATTA--TAAGATAAGTTATCT-CATA-TTTACTGCTTCGAGCAAG-A  127

seq1  TGATTCATTTGAAGATTAGAGGGTGAATTATTTTAAAGCACAAAAATAGT  200
      ||||| |||   ||||||||||| ||  || |||||||||| ||||||||
seq2  TGATT-ATT--GAGATTAGAGGG-GA--TA-TTTAAAGCAC-AAAATAGT  169

seq1  ACATGAATATTTTCATCTTGCTTTTATTAAGTATTGCATTTCATAAACAC  250
      ||||| ||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACATG-ATA-TTTCATCTTGCTTTTATTAAGTATTGCATTTCATAAACAC  217

seq1  TAAGGTCAATAGATTTACAAGAAAAAAAATGAAGTTTTCCAAGCCCTTG-  299
      ||||||| ||||||||||||| ||||||||||||||||||||||||||| 
seq2  TAAGGTC-ATAGATTTACAAG-AAAAAAATGAAGTTTTCCAAGCCCTTGC  265

seq1  CCAGTTGATCAAACCATTTTGTTTCTGTTTCCTTGCTCCCTTTGCCAGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGATCAAACCATTTTGTTTCTGTTTCCTTGCTCCCTTTGCCAGAA  315

seq1  AGTGTATGGGTTACAATGTTTACTTCAGAACAGCTGTTAGAGTTTGGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATGGGTTACAATGTTTACTTCAGAACAGCTGTTAGAGTTTGGAAT  365

seq1  AAGAATATATACAATGGTTTTATGATATCTAGCATAAGTGGATGGAAGCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATATATACAATGGTTTTATGATATCTAGCATAAGTGGATGGAAGCT  415

seq1  TCATTACAAATTAAGTAAAATTAAAATGACCTTGTGTTCTTTGTAATTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACAAATTAAGTAAAATTAAAATGACCTTGTGTTCTTTGTAATTAA  465

seq1  ATATATTTCTACTCCCTCCCTTACAATCCTTGGTAAATTGTCTGACTGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTCTACTCCCTCCCTTACAATCCTTGGTAAATTGTCTGACTGTA  515

seq1  AACCATGATGCAGGAATGAAGAAAATTTCTGATTCTAATAATGAGGTCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGATGCAGGAATGAAGAAAATTTCTGATTCTAATAATGAGGTCAT  565

seq1  GGCATCTTTTTATTTTCAACTCTACCTCTAATATCCTCCAGACCCAACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTTTTTATTTTCAACTCTACCTCTAATATCCTCCAGACCCAACTG  615

seq1  TATCAACATGGACTAGAGGATGCCATTATGAATATTATTCATTGTGTATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAACATGGACTAGAGGATGCCATTATGAATATTATTCATTGTGTATA  665

seq1  GATGCTAAATTTATTGATTATTTCAATGGTGATTTAAGTTGAAATTTGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTAAATTTATTGATTATTTCAATGGTGATTTAAGTTGAAATTTGAG  715

seq1  CTAGCTTTTATAGAAAGTGGTACAAAGAATATACAACAAAAAATACATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTTTTATAGAAAGTGGTACAAAGAATATACAACAAAAAATACATCT  765

seq1  GTACAGTGAAGTCAGCACTCTGTAAAGCAGTGAAAACATACAAAAAAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTGAAGTCAGCACTCTGTAAAGCAGTGAAAACATACAAAAAAAAA  815

seq1  AAAGAAAGAAAGCAAAACCATGGATGAAGACCTGCCCCACAAGTCCCCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGCAAAACCATGGATGAAGACCTGCCCCACAAGTCCCCAA  865

seq1  TGGAGGAAAGTACTGAAAGGAACTGAAGGGATTTTCAACCCCATAGGAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAAGTACTGAAAGGAACTGAAGGGATTTTCAACCCCATAGGAAG  915

seq1  AACAACAATATCTACCAACCATGCCTTCCAGAACTCCCAGGGACTAAACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAATATCTACCAACCATGCCTTCCAGAACTCCCAGGGACTAAACT  965

seq1  ACCAATCAGAGTACACAGGAGCAATCCATGGCACCAGCCACATATGTAGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCAGAGTACACAGGAGCAATCCATGGCACCAGCCACATATGTAGC  1015

seq1  AGAGGATGTCCTTGTAGTGTATCAATGGGAGGAGAGGTTTTGGGACCTGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATGTCCTTGTAGTGTATCAATGGGAGGAGAGGTTTTGGGACCTGG  1065

seq1  GAAATGCTTGATGCCCAAGTGTAGGAGAATTC  1131
      ||||||||||||||||||||||||||||||||
seq2  GAAATGCTTGATGCCCAAGTGTAGGAGAATTC  1097