BAC Information

Click to search

BAC

Clone NameB6Ng01-131M14
Chromosome5 (Build37)
Map Location 57,802,604 - 57,803,726
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041335, LOC100041349, LOC666455
Downstream geneLOC625721, EG666465, Pcdh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131M14.bB6Ng01-131M14.g
ACCDH932756DH932757
length1,2261,121
definitionDH932756|Mus musculus domesticus DNA, BAC clone: B6Ng01-131M14, 5' end.DH932757|Mus musculus domesticus DNA, BAC clone: B6Ng01-131M14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataactcacttaaagaaatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcga
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgcgagc
atcagcaacagaatacaagagatagaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactcaaaacatccaggaaatccaggacacaatgagaagacca
aacctacggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacaccaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggacagatgttatacagacactaagaga
acacaaatgccagcccaggctactatacccagccaaactctcaattacca
tagatggagaaaccaaagtattccacgacaaaactaaattcacccattat
ctctccacgaatctagcccttcaaaggataataacagaaaaaaccaatac
aaggacggaaccacgccctagaaaaaacaagaagatatccctcaacaaac
ctaaaagaagacagccacagaacagaatgccaacttaacacaaaatacag
gaagcaacattacctttccttaaatctcttattcatggactcaaattctc
aataaaaagacttgactaacggactggctccccaaacagaactacatctg
ctgctttacagaaaccattcagtaaagacagacctacctcaagaatgcct
gaacattttccagcaaatggttttga
gaattctccataaggccccaccttcagaagttagtgaatatgatttttgt
ctatgattccaaaatgaggcctcatatatagttaaactacttggaatttt
gaggtgtcttctcttctaagacgtaatcattgaaatgttccaatgtcaaa
gaaaataataaaaacatgtaataaattaatagcttcaaattaatagtcaa
tacacatgaattttcaaaaattttgcagtaaaaaaaaaaatgctcgccat
caactctttcaccctccagctcttccatcctccagagtttacagctagcc
aatcatctaaatatagctctcgcatcaagtaacaaaaactttccaaccaa
tataaagtatttctaattcgttatttcaaaataaaacaaaacttataggg
gttcagtgcaccataatgggtcttgagaatgcctgaagaaacaagataaa
gttgatacatcttgtatcttgtatggatagtgaactttcacttacaaagc
taaattactagaaatatggccatgaatatggcagctttccagtactgtgg
aaaaatggtgtcttttattcctctgttaaagaaaagtatgtgtgagacaa
acactggaaaatatacttaatcctttttttaaattttttaatctgttttt
aatcaacttaaaggtattaatgaataaaatattgtgttctaatatagact
ttccaaatttaaaaacacaataaagcttagtttaagcttctcttacagag
cttcattgtaactgcatatattcactatacactggaactattctgtgtga
tacaggtgccagcaaatgaaacagaaagatatttgtattctacaagttat
atcttaaatcatcactctgtataccacacattttgtttattggaatatta
tccattggatctaaaatatagaagccatgactagaaataacattgtgttt
gacacttccttttatcctactgagtaactgctacacctaccagacgttct
tgacaggcttgcagaaaagaaacaatgtttattatcttacacaaactgta
agtcataataatggagaaatatcacatcttggtaagaatgtgcccatgtg
tgcaaacatgcatgataattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_57802604_57803726
seq2: B6Ng01-131M14.g_70_1190

seq1  GAATTCTCCATAAGGCCCCACCTTCAGAAGTTAGTGAATATGATTTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATAAGGCCCCACCTTCAGAAGTTAGTGAATATGATTTTTGT  50

seq1  CTATGATTCCAAAATGAGGCCTCATATATAGTTAAACTACTTGGAATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATTCCAAAATGAGGCCTCATATATAGTTAAACTACTTGGAATTTT  100

seq1  GAGGTGTCTTCTCTTCTAAGACGTAATCATTGAAATGTTCCAATGTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTCTTCTCTTCTAAGACGTAATCATTGAAATGTTCCAATGTCAAA  150

seq1  GAAAATAATAAAAACATGTAATAAATTAATAGCTTCAAATTAATAGTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAATAAAAACATGTAATAAATTAATAGCTTCAAATTAATAGTCAA  200

seq1  TACACATGAATTTTCAAAAATTTTGCAGTAAAAAAAAAAATGCTCGCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATGAATTTTCAAAAATTTTGCAGTAAAAAAAAAAATGCTCGCCAT  250

seq1  CAACTCTTTCACCCTCCAGCTCTTCCATCCTCCAGAGTTTACAGCTAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTTTCACCCTCCAGCTCTTCCATCCTCCAGAGTTTACAGCTAGCC  300

seq1  AATCATCTAAATATAGCTCTCGCATCAAGTAACAAAAACTTTCCAACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCTAAATATAGCTCTCGCATCAAGTAACAAAAACTTTCCAACCAA  350

seq1  TATAAAGTATTTCTAATTCGTTATTTCAAAATAAAACAAAACTTATAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTATTTCTAATTCGTTATTTCAAAATAAAACAAAACTTATAGGG  400

seq1  GTTCAGTGCACCATAATGGGTCTTGAGAATGCCTGAAGAAACAAGATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTGCACCATAATGGGTCTTGAGAATGCCTGAAGAAACAAGATAAA  450

seq1  GTTGATACATCTTGTATCTTGTATGGATAGTGAACTTTCACTTACAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATACATCTTGTATCTTGTATGGATAGTGAACTTTCACTTACAAAGC  500

seq1  TAAATTACTAGAAATATGGCCATGAATATGGCAGCTTTCCAGTACTGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACTAGAAATATGGCCATGAATATGGCAGCTTTCCAGTACTGTGG  550

seq1  AAAAATGGTGTCTTTTATTCCTCTGTTAAAGAAAAGTATGTGTGAGACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGTGTCTTTTATTCCTCTGTTAAAGAAAAGTATGTGTGAGACAA  600

seq1  ACACTGGAAAATATACTTAATCCTTTTTTTAAATTTTTTAATCTGTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGAAAATATACTTAATCCTTTTTTTAAATTTTTTAATCTGTTTTT  650

seq1  AATCAACTTAAAGGTATTAATGAATAAAATATTGTGTTCTAATATAGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACTTAAAGGTATTAATGAATAAAATATTGTGTTCTAATATAGACT  700

seq1  TTCCAAATTTAAAAACACAATAAAGCTTAGTTTAAGCTTCTCTTACAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAATTTAAAAACACAATAAAGCTTAGTTTAAGCTTCTCTTACAGAG  750

seq1  CTTCATTGTAACTGCATATATTCACTATACACTGGAACTATTCTGTGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTGTAACTGCATATATTCACTATACACTGGAACTATTCTGTGTGA  800

seq1  TACAGGTGCCAGCAAATGAAACAGAAAGATATTTGTATTCTACAAGTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTGCCAGCAAATGAAACAGAAAGATATTTGTATTCTACAAGTTAT  850

seq1  ATCTTAAATCATCACTCTGTATACCACACATTTTGTTTATTGGAATATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATCTTAAATCATCACTCTGTATACCACACATTTTGTTTATTGGAATATT-  899

seq1  ATCCATTGGATCTTAAAATATAGAAGCCATGACTAGAAATAACATTGTGT  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATCCATTGGATC-TAAAATATAGAAGCCATGACTAGAAATAACATTGTGT  948

seq1  TTGACACTTCCTTTTATCCTACTGAGTAACTGCTACA-CTACCAGAACGT  999
      ||||||||||||||||||||||||||||||||||||| ||||||| ||||
seq2  TTGACACTTCCTTTTATCCTACTGAGTAACTGCTACACCTACCAG-ACGT  997

seq1  TCTTGACAGGCTTGCAGAGAAGAAACAATGTTAATTATCTTACAC-AACT  1048
      |||||||||||||||||| ||||||||||||| |||||||||||| ||||
seq2  TCTTGACAGGCTTGCAGAAAAGAAACAATGTTTATTATCTTACACAAACT  1047

seq1  GTAAGTCAT-ATAATGTAG-AATATCAACATTCTTGGTAAG-ATGTGCCC  1095
      ||||||||| |||||| || |||||| ||| |||||||||| ||||||||
seq2  GTAAGTCATAATAATGGAGAAATATC-ACA-TCTTGGTAAGAATGTGCCC  1095

seq1  ATTGTGTGCAATCATGCCATGATAATTT  1123
      | ||||||||| |||| |||||||||||
seq2  A-TGTGTGCAAACATG-CATGATAATTT  1121