BAC Information

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BAC

Clone NameB6Ng01-137D14
Chromosome5 (Build37)
Map Location 90,350,749 - 90,458,074
singlet/doubletdoublet
Overlap genenone
Upstream geneSlc4a4, Gc, LOC622870, Npffr2, LOC631105, Adamts3
Downstream geneEG665733, Cox18, Ankrd17, Alb1, Afp, Afm, LOC100040105, LOC622307, Rassf6, Cxcl5, Ppbp, Cxcl4, Gm1960, Cxcl15, Cxcl1, Cxcl2, 1110019K23Rik, Epgn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137D14.bB6Ng01-137D14.g
ACCDH936795DH936796
length1,153924
definitionDH936795|Mus musculus domesticus DNA, BAC clone: B6Ng01-137D14, 5' end.DH936796|Mus musculus domesticus DNA, BAC clone: B6Ng01-137D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,350,749 - 90,351,920)(90,457,446 - 90,458,074)
sequence
gaattcttaaaactagctttgagagacagggaataggggatggagagatg
gctcagcatttcctactcttccagacccaggcttgatccctgtcacccat
gtggcaaattacaacaatctgtaactcaagtgtcaggaacttcaacatcc
tttcccagcctctgcaggcacaacatgtatgtagtacatagacatacacc
tttaaacatacaataaaaaaaatcaagaccaagaaaaaaattgagggttt
aaccattttgtgctttactgctaacccttcctaatcctcttgccttttgc
cagattttagaatatatatcctaatcttttctggttttatttatttactt
tatgtaaatgggtgcttttctgcctgtctgtctgcacaccagaaaagggc
atcatatcccactagaatgcacttatatatggttgtgagccaccatgtga
gtgctgggaattgagcctaagatttctggaagagcagtcaatgctgctaa
ccactgagccatctctccggaatataagtactgatattaagttcagtgac
taattaagtaacaaaggagaagaaagcattgttagtaataagagtcagta
tagttcaataaataaatacaattttgagtaagtccaggaagatactcata
ttagtgtgtgttgacctttttcctgggttaccaattcaaatgctaatcct
ttggaaacagatgcacccaaatttatctgccatgagagcattctttcatc
ctatcaagtagatatacaagattaaccatctcaataaattacaaattgat
tatccccagagtcactgtacccccaagtttgtgttattattaagtgaggc
tgtgaccaactccatcttccccaggaagatcttctcacccagccctgagc
agggttctgtcagctgcccctcagtttacagaagagcctgagatgcctaa
gccccaacttatctactagctctcttggcacaacaaatgtttaatctata
taaaaactaaaatagatcataactatttagaggaaaagttctttgactag
actacctcatgatgtttctaattaattagaacatctggatgggctcatta
ttataagagcaaagctgaagctttcaactgcaggatgcttaaactaatgg
gtg
gaattcagagaatgtgtgtgattagatttgtccaatattggcccattcct
gctttatgagtgtagcagactgatcaaaaagaaagagacgggaaagaaaa
caaagcccatttagagactacagacttagtgacttttttataattgaaaa
aattttttttcatgcaatatgttttgatcatgatttttccctcctccagg
gcctcccagatactccccatctcctgcccaccgattctacattctctctc
tctctttctaaaacaaccaacagatagaaatacaaacaaagaaaaagaaa
aaggaaatgcacgcacaaccacaagaaaacattcaccaaaagacaaaaca
aaacaaaaaacaaataaaaagaaacaagtgaaaaatcagtaataaaaaaa
aaatgccagaacaaactaaagagacaaaaattgtatgaagctaccattct
tttgtcttgtgttggccaatgattcctgcatgtggaggctgccctgaagt
atggttaatatacccagtgagactcccttggagaaaactaacttttcctt
taccagtgcgtatcaagtatagatagattcttggtaaggggagggaggcc
tcacccatctcatcttctccatgctgggaccctgtctggtttgaacctga
gcaggtcttgtgtgtgctagtcctgctgtgtctggaagacatcccttttg
gctcttaaagctgccttttcttccacacagatccctgacccttagaggaa
ggtctttcatgaggacacccatttgggactgagtgctccaaggcctatct
atccctctttgctcactgtccagctatgggtctctgtgttagttcccatc
tattataggaagagattctctgatgatagccaagcaaggagctaatctat
gggtgtagcagaatgtggttagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_90350749_90351920
seq2: B6Ng01-137D14.b_49_1201

seq1  GAATTCTTAAAACTAGCTTTGAGAGACAGGGAATAGGGGATGGAGAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAACTAGCTTTGAGAGACAGGGAATAGGGGATGGAGAGATG  50

seq1  GCTCAGCATTTCCTACTCTTCCAGACCCAGGCTTGATCCCTGTCACCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCATTTCCTACTCTTCCAGACCCAGGCTTGATCCCTGTCACCCAT  100

seq1  GTGGCAAATTACAACAATCTGTAACTCAAGTGTCAGGAACTTCAACATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAATTACAACAATCTGTAACTCAAGTGTCAGGAACTTCAACATCC  150

seq1  TTTCCCAGCCTCTGCAGGCACAACATGTATGTAGTACATAGACATACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAGCCTCTGCAGGCACAACATGTATGTAGTACATAGACATACACC  200

seq1  TTTAAACATACAATAAAAAAAATCAAGACCAAGAAAAAAATTGAGGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACATACAATAAAAAAAATCAAGACCAAGAAAAAAATTGAGGGTTT  250

seq1  AACCATTTTGTGCTTTACTGCTAACCCTTCCTAATCCTCTTGCCTTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTTTGTGCTTTACTGCTAACCCTTCCTAATCCTCTTGCCTTTTGC  300

seq1  CAGATTTTAGAATATATATCCTAATCTTTTCTGGTTTTATTTATTTACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTTAGAATATATATCCTAATCTTTTCTGGTTTTATTTATTTACTT  350

seq1  TATGTAAATGGGTGCTTTTCTGCCTGTCTGTCTGCACACCAGAAAAGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAATGGGTGCTTTTCTGCCTGTCTGTCTGCACACCAGAAAAGGGC  400

seq1  ATCATATCCCACTAGAATGCACTTATATATGGTTGTGAGCCACCATGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATCCCACTAGAATGCACTTATATATGGTTGTGAGCCACCATGTGA  450

seq1  GTGCTGGGAATTGAGCCTAAGATTTCTGGAAGAGCAGTCAATGCTGCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGAATTGAGCCTAAGATTTCTGGAAGAGCAGTCAATGCTGCTAA  500

seq1  CCACTGAGCCATCTCTCCGGAATATAAGTACTGATATTAAGTTCAGTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAGCCATCTCTCCGGAATATAAGTACTGATATTAAGTTCAGTGAC  550

seq1  TAATTAAGTAACAAAGGAGAAGAAAGCATTGTTAGTAATAAGAGTCAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAGTAACAAAGGAGAAGAAAGCATTGTTAGTAATAAGAGTCAGTA  600

seq1  TAGTTCAATAAATAAATACAATTTTGAGTAAGTCCAGGAAGATACTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCAATAAATAAATACAATTTTGAGTAAGTCCAGGAAGATACTCATA  650

seq1  TTAGTGTGTGTTGACCTTTTTCCTGGGTTACCAATTCAAATGCTAATCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTGTGTTGACCTTTTTCCTGGGTTACCAATTCAAATGCTAATCCT  700

seq1  TTGGAAACAGATGCACCCAAATTTATCTGCCATGAGAGCATTCTTTCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAACAGATGCACCCAAATTTATCTGCCATGAGAGCATTCTTTCATC  750

seq1  CTATCAAGTAGATATACAAGATTAACCATCTCAATAAATTACAAATTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAAGTAGATATACAAGATTAACCATCTCAATAAATTACAAATTGAT  800

seq1  TATCCCCAGAGTCACTGTACCCCCAAGTTTGTGTTATTATTAAGTGAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCAGAGTCACTGTACCCCCAAGTTTGTGTTATTATTAAGTGAGGC  850

seq1  TGTGACCAACTCCATCTTCCCCAGGAAGATCTTCTCACCCAGCCCTGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCAACTCCATCTTCCCCAGGAAGATCTTCTCACCCAGCCCTGAGC  900

seq1  AGGGTTCTGTCAAGCTGCCCCTCAGTTTACAGAAGAGCCTGAGGATGCCT  950
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  AGGGTTCTGTC-AGCTGCCCCTCAGTTTACAGAAGAGCCTGA-GATGCCT  948

seq1  AAGCCCCAACTTATCTACTAGCTCCTCTTGGCACAACAAATGTTTATTCT  1000
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  AAGCCCCAACTTATCTACTAGCT-CTCTTGGCACAACAAATGTTTAATCT  997

seq1  AATAATAAAGACTAAAAATAGATCATAAACTATTTAAGAGGAGAAAAGTT  1050
      |   ||||| ||| |||||||||||| |||||||| ||||  ||||||||
seq2  A--TATAAAAACT-AAAATAGATCAT-AACTATTT-AGAG--GAAAAGTT  1040

seq1  CTTTGACCTAGACTTACCTTCATGATGGTTTCTAATAAATTTAGACAATC  1100
      |||||| |||||| |||| ||||||| ||||||||| || |||||  |||
seq2  CTTTGA-CTAGAC-TACC-TCATGAT-GTTTCTAATTAA-TTAGAACATC  1085

seq1  TGGATGGGCTCATTATTATAAGAAGCAAAGCTTGAAGCTTTCCAGCTGCC  1150
      |||||||||||||||||||||| |||||||| ||||||||| || ||| |
seq2  TGGATGGGCTCATTATTATAAG-AGCAAAGC-TGAAGCTTT-CAACTG-C  1131

seq1  AAGATGCTTAACATAATGGGTG  1172
      | |||||||||  |||||||||
seq2  AGGATGCTTAAACTAATGGGTG  1153

seq1: chr5_90457446_90458074
seq2: B6Ng01-137D14.g_68_696 (reverse)

seq1  TCCCAGCATGGAGAAGATGAGATGGGTGAGGCCTCCCTCCCCTTACCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCATGGAGAAGATGAGATGGGTGAGGCCTCCCTCCCCTTACCAAG  50

seq1  AATCTATCTATACTTGATACGCACTGGTAAAGGAAAAGTTAGTTTTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATCTATACTTGATACGCACTGGTAAAGGAAAAGTTAGTTTTCTCC  100

seq1  AAGGGAGTCTCACTGGGTATATTAACCATACTTCAGGGCAGCCTCCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGTCTCACTGGGTATATTAACCATACTTCAGGGCAGCCTCCACAT  150

seq1  GCAGGAATCATTGGCCAACACAAGACAAAAGAATGGTAGCTTCATACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAATCATTGGCCAACACAAGACAAAAGAATGGTAGCTTCATACAAT  200

seq1  TTTTGTCTCTTTAGTTTGTTCTGGCATTTTTTTTTTATTACTGATTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTCTTTAGTTTGTTCTGGCATTTTTTTTTTATTACTGATTTTTC  250

seq1  ACTTGTTTCTTTTTATTTGTTTTTTGTTTTGTTTTGTCTTTTGGTGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTCTTTTTATTTGTTTTTTGTTTTGTTTTGTCTTTTGGTGAATG  300

seq1  TTTTCTTGTGGTTGTGCGTGCATTTCCTTTTTCTTTTTCTTTGTTTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGTGGTTGTGCGTGCATTTCCTTTTTCTTTTTCTTTGTTTGTAT  350

seq1  TTCTATCTGTTGGTTGTTTTAGAAAGAGAGAGAGAGAATGTAGAATCGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCTGTTGGTTGTTTTAGAAAGAGAGAGAGAGAATGTAGAATCGGT  400

seq1  GGGCAGGAGATGGGGAGTATCTGGGAGGCCCTGGAGGAGGGAAAAATCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGAGATGGGGAGTATCTGGGAGGCCCTGGAGGAGGGAAAAATCAT  450

seq1  GATCAAAACATATTGCATGAAAAAAAATTTTTTCAATTATAAAAAAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAAACATATTGCATGAAAAAAAATTTTTTCAATTATAAAAAAGTCA  500

seq1  CTAAGTCTGTAGTCTCTAAATGGGCTTTGTTTTCTTTCCCGTCTCTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTCTGTAGTCTCTAAATGGGCTTTGTTTTCTTTCCCGTCTCTTTCT  550

seq1  TTTTGATCAGTCTGCTACACTCATAAAGCAGGAATGGGCCAATATTGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATCAGTCTGCTACACTCATAAAGCAGGAATGGGCCAATATTGGAC  600

seq1  AAATCTAATCACACACATTCTCTGAATTC  629
      |||||||||||||||||||||||||||||
seq2  AAATCTAATCACACACATTCTCTGAATTC  629