BAC Information

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BAC

Clone NameB6Ng01-137I01
Chromosome5 (Build37)
Map Location 125,972,844 - 126,123,384
singlet/doubletdoublet
Overlap geneAacs, Tmem132b
Upstream gene2900002H16Rik, Rpl32-ps5c, Tmed2, Ddx55, Eif2b1, Gtf2h3, 4432405B04Rik, Atp6v0a2, Atp6v0a2, Dnahc10, Ccdc92, Zfp664, 3110032G18Rik, Ncor2, Scarb1, Ubc, Dhx37, Bri3bp
Downstream geneEG231736, LOC100039178, LOC665760
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137I01.bB6Ng01-137I01.g
ACCDH937005DH937006
length1,160620
definitionDH937005|Mus musculus domesticus DNA, BAC clone: B6Ng01-137I01, 5' end.DH937006|Mus musculus domesticus DNA, BAC clone: B6Ng01-137I01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,972,844 - 125,974,009)(126,122,836 - 126,123,384)
sequence
gaattcagggccgatacttggccaggctccacccctgagctaccagccct
catttgcatttttccaaatccatctgtagcaacaggtgtttctgagagaa
ggaaacacagagccagggttgcctggacacggttgagatctgtttctgaa
ctgggctctgcctggggcggggacttgctccaatggccagggctcttcag
tctgcctagctcttggcctgcccttctgtcgctcatggtcagttggtttc
cctctgcctttactgtagctccccgtgagagccacggaagaggcacgggt
acctgccgggctgaggagatgcagtaaactgttgacagctgtttgctttt
gcttgcagtatggtccccaaggtagaccctatggcttaggaggagggcgg
gctgcttgttggttagcgaggagggcggggagcctgctgggtggagcact
cccctgggccatgagcccggccccccttggggaaccacagtgaagaggct
tttcaggtctgctcccaggcgagtgagcacctctgcagcaggccttgcca
cctgccaggcaccagagtgctcttgtagggttgaggggaacagagccgga
gccctgccctccgagtgcctggggactatcgggggacacgtgtgtgtgct
ttgaaaggtagagtccagactgctgttgtctgtcgttcagagccccaagt
gtctgttttgttgatggtgattcctctgaccacaggtgttctctgcctcc
ctgtcgtgatggcaacctgcctggtggtggggcctccactcattctgccc
cacaggcttacgcatagctctccctgtatgtgtgtgctcacctgtcctct
cttgttccacttacccatgtgccagccagcacatttcttagggcagtggt
tctcaacctatgggtttcagccccttttggaggttcaacagcccttcaca
gggggtcccctacgaccattagataacacagtatctatacgatttgtaac
tgtagcaaatttacagttataccatagcatggaaacatttgttgggtgca
cggaccggggcctgatcagcccccttacccatgggatcagggttccgacc
gaatggcaatgaaaccgcgggatttacacgacgactcaagggagtgtgga
tctgaatgta
gaattctttcccatgcaaatgaggcatttctgtagccttagccttcagcc
aatgacctttgcccaccctgcatagtctcacccacttccccaaaactata
gaactcttggttcttgaaagtaaatgcccaccccaagaaaggaaatatga
acaagctaagatcatatcagagaacttcttcattaaagatcatcagaaac
ctttgtctaaaagagccttaacactgagattctcagagaaggtcttcccc
cacatccttcatcctttcagcctgataggcagaggctcctggataccctg
agagggagaaatcaaaagaaatggaaccacagctttcctcctgaactctt
ctttaccctctgacctggcaaacagcaatgttggatgctctggagggagg
ggcagtctgtggaccccacctgtcccagactttgccctgtcctctctgag
ccagcagcatctggacactcccagcgaagaggcggaacccagagggttgc
tgaagggaaatgaagggagagtggatctgggggagaggtgaggcaaataa
aagaggaatggggaaaaccagtcaggatgtaatatatgagaaacgaaaca
aacaaacaaattagcactgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_125972844_125974009
seq2: B6Ng01-137I01.b_48_1207

seq1  GAATTCAGGGCCGATACTTGGCCAGGCTCCACCCCTGAGCTACCAGCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGCCGATACTTGGCCAGGCTCCACCCCTGAGCTACCAGCCCT  50

seq1  CATTTGCATTTTTCCAAATCCATCTGTAGCAACAGGTGTTTCTGAGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCATTTTTCCAAATCCATCTGTAGCAACAGGTGTTTCTGAGAGAA  100

seq1  GGAAACACAGAGCCAGGGTTGCCTGGACACGGTTGAGATCTGTTTCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACACAGAGCCAGGGTTGCCTGGACACGGTTGAGATCTGTTTCTGAA  150

seq1  CTGGGCTCTGCCTGGGGCGGGGACTTGCTCCAATGGCCAGGGCTCTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTCTGCCTGGGGCGGGGACTTGCTCCAATGGCCAGGGCTCTTCAG  200

seq1  TCTGCCTAGCTCTTGGCCTGCCCTTCTGTCGCTCATGGTCAGTTGGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTAGCTCTTGGCCTGCCCTTCTGTCGCTCATGGTCAGTTGGTTTC  250

seq1  CCTCTGCCTTTACTGTAGCTCCCCGTGAGAGCCACGGAAGAGGCACGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTTTACTGTAGCTCCCCGTGAGAGCCACGGAAGAGGCACGGGT  300

seq1  ACCTGCCGGGCTGAGGAGATGCAGTAAACTGTTGACAGCTGTTTGCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCGGGCTGAGGAGATGCAGTAAACTGTTGACAGCTGTTTGCTTTT  350

seq1  GCTTGCAGTATGGTCCCCAAGGTAGACCCTATGGCTTAGGAGGAGGGCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCAGTATGGTCCCCAAGGTAGACCCTATGGCTTAGGAGGAGGGCGG  400

seq1  GCTGCTTGTTGGTTAGCGAGGAGGGCGGGGAGCCTGCTGGGTGGAGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTGTTGGTTAGCGAGGAGGGCGGGGAGCCTGCTGGGTGGAGCACT  450

seq1  CCCCTGGGCCATGAGCCCGGCCCCCCTTGGGGAACCACAGTGAAGAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGGCCATGAGCCCGGCCCCCCTTGGGGAACCACAGTGAAGAGGCT  500

seq1  TTTCAGGTCTGCTCCCAGGCGAGTGAGCACCTCTGCAGCAGGCCTTGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGTCTGCTCCCAGGCGAGTGAGCACCTCTGCAGCAGGCCTTGCCA  550

seq1  CCTGCCAGGCACCAGAGTGCTCTTGTAGGGTTGAGGGGAACAGAGCCGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCAGGCACCAGAGTGCTCTTGTAGGGTTGAGGGGAACAGAGCCGGA  600

seq1  GCCCTGCCCTCCGAGTGCCTGGGGACTATCGGGGGACACGTGTGTGTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGCCCTCCGAGTGCCTGGGGACTATCGGGGGACACGTGTGTGTGCT  650

seq1  TTGAAAGGTAGAGTCCAGACTGCTGTTGTCTGTCGTTCAGAGCCCCAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGGTAGAGTCCAGACTGCTGTTGTCTGTCGTTCAGAGCCCCAAGT  700

seq1  GTCTGTTTTGTTGATGGTGATTCCTCTGACCACAGGTGTTCTCTGCCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTTTGTTGATGGTGATTCCTCTGACCACAGGTGTTCTCTGCCTCC  750

seq1  CTGTCGTGATGGCAACCTGCCTGGTGGTGGGGCCTCCACTCATTCTGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCGTGATGGCAACCTGCCTGGTGGTGGGGCCTCCACTCATTCTGCCC  800

seq1  CACAGGCTTACGCATAGCTCTCCCTGTATGTGTGTGCTCACCTGTCCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCTTACGCATAGCTCTCCCTGTATGTGTGTGCTCACCTGTCCTCT  850

seq1  CTTGTTCCACTTACCCATGTGCCAGCCAGCACATTTCTTAGGGCAGTGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCCACTTACCCATGTGCCAGCCAGCACATTTCTTAGGGCAGTGGT  900

seq1  TCTCAACCTATGGGTTTCAGCCCC-TTTGGAGG-TCAACAGCCCTTCCAC  948
      |||||||||||||||||||||||| |||||||| |||||||||||| |||
seq2  TCTCAACCTATGGGTTTCAGCCCCTTTTGGAGGTTCAACAGCCCTT-CAC  949

seq1  A-GGGGTCCCCTACGACCATTAGATAACACAGGTATCTATACGATTTGTA  997
      | ||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGGGGGTCCCCTACGACCATTAGATAACACA-GTATCTATACGATTTGTA  998

seq1  ACTGTAGCAAAATTACAGTTATACCATAGCAATGAAAACAATTTGTTGGG  1047
      ||||||||||| |||||||||||||||||| ||| |||| ||||||||||
seq2  ACTGTAGCAAATTTACAGTTATACCATAGC-ATGGAAAC-ATTTGTTGGG  1046

seq1  TGCCACGGACC-GGGCCTGATCAGCCCCCCTCAACCCATGGGAATCAGGG  1096
      || |||||||| ||||||||||||||||| |  ||||||||| |||| ||
seq2  TG-CACGGACCGGGGCCTGATCAGCCCCCTT--ACCCATGGG-ATCA-GG  1091

seq1  GTTCAGACAGATGGGCATAGAATCGGCGGGAATTGACA-GACAGACTCAA  1145
      |||| ||| ||  ||||  ||| | ||||| ||| ||| ||| |||||||
seq2  GTTCCGACCGAATGGCAATGAAACCGCGGG-ATTTACACGAC-GACTCAA  1139

seq1  GGGAGTGTGGATCTGAATGTA  1166
      |||||||||||||||||||||
seq2  GGGAGTGTGGATCTGAATGTA  1160

seq1: chr5_126122836_126123384
seq2: B6Ng01-137I01.g_139_691 (reverse)

seq1  CCAGTGCT-ATTTGTTTGTTTG-TTCGTTTCTCATATATTACATCCTGAC  48
      |||||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  CCAGTGCTAATTTGTTTGTTTGTTTCGTTTCTCATATATTACATCCTGAC  50

seq1  TGGTTT--CCCCTTCCTCTTTTCTTTGCCTCACCTCTCCCCCAGATCCAC  96
      ||||||  ||| |||||||||| |||||||||||||||||||||||||||
seq2  TGGTTTTCCCCATTCCTCTTTTATTTGCCTCACCTCTCCCCCAGATCCAC  100

seq1  TCTCCCTTCATTTCCCTTCAGCAACCCTCTGGGTTCCGCCTCTTCGCTGG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTCATTTCCCTTCAGCAACCCTCTGGGTTCCGCCTCTTCGCTGG  150

seq1  GAGTGTCCAGATGCTGCTGGCTCAGAGAGGACAGGGCAAAGTCTGGGACA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTCCAGATGCTGCTGGCTCAGAGAGGACAGGGCAAAGTCTGGGACA  200

seq1  GGTGGGGTCCACAGACTGCCCCTCCCTCCAGAGCATCCAACATTGCTGTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGTCCACAGACTGCCCCTCCCTCCAGAGCATCCAACATTGCTGTT  250

seq1  TGCCAGGTCAGAGGGTAAAGAAGAGTTCAGGAGGAAAGCTGTGGTTCCAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGTCAGAGGGTAAAGAAGAGTTCAGGAGGAAAGCTGTGGTTCCAT  300

seq1  TTCTTTTGATTTCTCCCTCTCAGGGTATCCAGGAGCCTCTGCCTATCAGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGATTTCTCCCTCTCAGGGTATCCAGGAGCCTCTGCCTATCAGG  350

seq1  CTGAAAGGATGAAGGATGTGGGGGAAGACCTTCTCTGAGAATCTCAGTGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGGATGAAGGATGTGGGGGAAGACCTTCTCTGAGAATCTCAGTGT  400

seq1  TAAGGCTCTTTTAGACAAAGGTTTCTGATGATCTTTAATGAAGAAGTTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTCTTTTAGACAAAGGTTTCTGATGATCTTTAATGAAGAAGTTCT  450

seq1  CTGATATGATCTTAGCTTGTTCATATTTCCTTTCTTGGGGTGGGCATTTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATGATCTTAGCTTGTTCATATTTCCTTTCTTGGGGTGGGCATTTA  500

seq1  CTTTCAAGAACCAAGAGTTCTATAGTTTTGGGGAAGTGGGTGAGACTATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAGAACCAAGAGTTCTATAGTTTTGGGGAAGTGGGTGAGACTATG  550

seq1  CAG  549
      |||
seq2  CAG  553