BAC Information

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BAC

Clone NameB6Ng01-138L02
Chromosome5 (Build37)
Map Location 43,341,649 - 43,541,337
singlet/doubletdoublet
Overlap geneLOC433883
Upstream geneLOC100040588, EG636612
Downstream geneEG665934, Cpeb2, C1qtnf7, 4833430A08Rik, 5730509K17Rik, Fbxl5, Bst1, Cd38, EG665989, EG665994, LOC100040677, EG384179, Fgfbp1, Prom1, LOC100041413
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138L02.bB6Ng01-138L02.g
ACCDH937881DH937882
length960365
definitionDH937881|Mus musculus domesticus DNA, BAC clone: B6Ng01-138L02, 5' end.DH937882|Mus musculus domesticus DNA, BAC clone: B6Ng01-138L02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,341,649 - 43,342,251)(43,540,967 - 43,541,337)
sequence
gaattctttgttcagctctgagccccatcttttaagggggttatttgatt
aagcacggttattcttaggtaacttccatcttattctagttattctactg
tctccgttggacttgaagactgccagacaggagggaaattacacctgtcc
catgaaattctgtcaaaactcatgactaggaaagtcatgggcccaaggga
agaacttactgatgttgctttgtttagtggtattgttgtgaaactgtctt
ctaaatattcacgttgtgtctattgatctgtcctgttctcaactttggtc
agagaggctccttgttgcaattagtagggttaataaagaccataaatgtg
aattgtgttgatagaaacaacagagtatgttctgctataaaaaccacaca
cacacacacacacacacacctacttaactcattaatactcagggattgtt
gcggaaacaggagcagaaagaactagagaccaagggaagagaattcattc
catgaaatgctgttctctagacaaggtatggcttgcacacatgaactctc
agcagccataggtatcagcacatttcaataagaaatccagcctaaaggat
gaggcctctcaaggccctaccccaagctgagaaactataggcagttggta
actatagagagaagaggagtcacttttcatttgggaagtacccacttgta
ggttgaccatacttaagtggatgactccatacctatgtgaacatgggtag
caccaaatggtgtcagtgtattacaatagaaagcacatgaaattaggagt
gagatgtattggagatcaaaaaggagaaaaccctgagagaattggagaga
ggatatgaggaatgaatacaatcaagattcatgtgtttagatgtatagca
ttttccaaaaatatgattcaaaaagagaaagtagaagcacagagctactg
aggagaccct
acagggaatactgaatttgtccagtgttcaaagaaggagtagagaaatag
gatctttgaaaagagaatactccatgaacagggccactgggggggagggg
tcccatagcagacatacacctggtaaatgtaagtagatggcccaagctgg
aacagtaagcgcatgtagcaggccagttcccagagtcccagagaggacac
tgcaagacccctgtgatgaatctggcttccccctgagtgattccagaaca
cagcagtagtatttggagcagatggattccgtgagctgactcacgctgcc
attggttctctggctgcttagagaagacaaagctgaaggctgaagtggga
gggaggaggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_43341649_43342251
seq2: B6Ng01-138L02.b_37_639

seq1  GAATTCTTTGTTCAGCTCTGAGCCCCATCTTTTAAGGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGCTCTGAGCCCCATCTTTTAAGGGGGTTATTTGATT  50

seq1  AAGCACGGTTATTCTTAGGTAACTTCCATCTTATTCTAGTTATTCTACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACGGTTATTCTTAGGTAACTTCCATCTTATTCTAGTTATTCTACTG  100

seq1  TCTCCGTTGGACTTGAAGACTGCCAGACAGGAGGGAAATTACACCTGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGTTGGACTTGAAGACTGCCAGACAGGAGGGAAATTACACCTGTCC  150

seq1  CATGAAATTCTGTCAAAACTCATGACTAGGAAAGTCATGGGCCCAAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAATTCTGTCAAAACTCATGACTAGGAAAGTCATGGGCCCAAGGGA  200

seq1  AGAACTTACTGATGTTGCTTTGTTTAGTGGTATTGTTGTGAAACTGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTACTGATGTTGCTTTGTTTAGTGGTATTGTTGTGAAACTGTCTT  250

seq1  CTAAATATTCACGTTGTGTCTATTGATCTGTCCTGTTCTCAACTTTGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATTCACGTTGTGTCTATTGATCTGTCCTGTTCTCAACTTTGGTC  300

seq1  AGAGAGGCTCCTTGTTGCAATTAGTAGGGTTAATAAAGACCATAAATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGCTCCTTGTTGCAATTAGTAGGGTTAATAAAGACCATAAATGTG  350

seq1  AATTGTGTTGATAGAAACAACAGAGTATGTTCTGCTATAAAAACCACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGTTGATAGAAACAACAGAGTATGTTCTGCTATAAAAACCACACA  400

seq1  CACACACACACACACACACCTACTTAACTCATTAATACTCAGGGATTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACCTACTTAACTCATTAATACTCAGGGATTGTT  450

seq1  GCGGAAACAGGAGCAGAAAGAACTAGAGACCAAGGGAAGAGAATTCATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAAACAGGAGCAGAAAGAACTAGAGACCAAGGGAAGAGAATTCATTC  500

seq1  CATGAAATGCTGTTCTCTAGACAAGGTATGGCTTGCACACATGAACTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAATGCTGTTCTCTAGACAAGGTATGGCTTGCACACATGAACTCTC  550

seq1  AGCAGCCATAGGTATCAGCACATTTCAATAAGAAATCCAGCCTAAAGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCATAGGTATCAGCACATTTCAATAAGAAATCCAGCCTAAAGGAT  600

seq1  GAG  603
      |||
seq2  GAG  603

seq1: chr5_43540967_43541337
seq2: B6Ng01-138L02.g_66_436 (reverse)

seq1  TCCCCCCCTCCTCCCTCCCACTTCAGCCTTCAGCTTTGTCTTCTCTAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCCTCCTCCCTCCCACTTCAGCCTTCAGCTTTGTCTTCTCTAAGC  50

seq1  AGCCAGAGAACCAATGGCAGCGTGAGTCAGCTCACGGAATCCATCTGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGAACCAATGGCAGCGTGAGTCAGCTCACGGAATCCATCTGCTC  100

seq1  CAAATACTACTGCTGTGTTCTGGAATCACTCAGGGGGAAGCCAGATTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACTACTGCTGTGTTCTGGAATCACTCAGGGGGAAGCCAGATTCAT  150

seq1  CACAGGGGTCTTGCAGTGTCCTCTCTGGGACTCTGGGAACTGGCCTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGGTCTTGCAGTGTCCTCTCTGGGACTCTGGGAACTGGCCTGCTA  200

seq1  CATGCGCTTACTGTTCCAGCTTGGGCCATCTACTTACATTTACCAGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGCTTACTGTTCCAGCTTGGGCCATCTACTTACATTTACCAGGTGT  250

seq1  ATGTCTGCTATGGGACCCCTCCCCCCCAGTGGCCCTGTTCATGGAGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGCTATGGGACCCCTCCCCCCCAGTGGCCCTGTTCATGGAGTATT  300

seq1  CTCTTTTCAAAGATCCTATTTCTCTACTCCTTCTTTGAACACTGGACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCAAAGATCCTATTTCTCTACTCCTTCTTTGAACACTGGACAAA  350

seq1  TTCAGTATTCCCTGTGAATTC  371
      |||||||||||||||||||||
seq2  TTCAGTATTCCCTGTGAATTC  371