BAC Information

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BAC

Clone NameB6Ng01-144B19
Chromosome5 (Build37)
Map Location 95,103,297 - 95,104,485
singlet/doubletsinglet
Overlap geneLOC621203
Upstream geneLOC666075, LOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421, AA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507
Downstream geneLOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049, EG666159, LOC666164, EG666169, D5Ertd577e, LOC100041354, LOC100040503, LOC666187, EG622731, LOC100041380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144B19.bB6Ng01-144B19.g
ACCDH941872DH941873
length1,2141,168
definitionDH941872|Mus musculus domesticus DNA, BAC clone: B6Ng01-144B19, 5' end.DH941873|Mus musculus domesticus DNA, BAC clone: B6Ng01-144B19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaataggtccatatctatcaccctacagaacactccagtccaag
cggaccaaaaacctcaacctaaacctagatacattaaatataattaaaaa
gtgggtaatagctttgaatccattagtacaggagacatcttcctgaaaga
tccaacatctcagtcactaagatcaaaaagtaataaatggaacctcatga
aactaaaacatctcctgtatggaaaaggagatttttgtcaaggacagtgg
tcaaaaggataaaacagtagcctagagattgggaaaagatctccaccaac
cttccatctgaaagagggctgatatccaaagtacctaaagaactaaaaaa
agtagacactaacaaaccaaatagcctaaattttaaaaaggggtacatag
ctaaatagaattttcaacagaggaatatttaatgaccaagaagcacttac
agaaatgctcaacatccttagtcatcagggaaatccaaatcaaaatgact
ctgggatttcattttacaccctttagaagggcaacagttcatgctagcta
gggtgtggagcatgggaaaactctcttcctttgctgataggagtgcaaac
ttgtacaaccagtctgaaaataaattcagtgctttctcaaataattggaa
ataattatctctgaaatgcttataccactcctggtcatatactcaaaaga
tgctgcgtcataccacaagaatagtgttttaactatgtgcagttttattg
gaaatagccagaaacttgaaacaacccaaatgtccctcaactgaagaatg
gaaaatgaatatatggtacatttacacaacagaatactactcagctgtta
aaaacaatgacatcatgaaacttgcaggctaaacccagactcataaagac
aaatgtggcgtgtacacaggagtgaattgtaaccataaagtacaggatac
ctttttatcagaggcttaaagaaactagaagaaaggtccagcagagatat
ttgatctaatagacataattaagtacacttcagagtagatgatgagggac
tttatgtaaggaatctgacagtataagtcgtcacatatggttgagatgac
gagaagaaattgaatctgtgactgcgaaatctgaaatgacagataccttg
catgaactctgatctcagagtgaggaccttgctgacttctttgcatacga
acctatgcggacgt
gaattctgtctcacccaaccaaatacgaacaatgggaattgatgttaaat
aggcagctcagtcacttgtcctgggctttcatgaatgaaaatagcttcag
taaaaatttcaaattcctcgggtgaagagaaagagattttctacaaagag
gtttatagaggtcttttgggaaatgtaaggacaaatcaatactgaaaaga
aaaaaatttccggataaaatgggatcaagacaaaggagactttgagctgg
gtcaggctcatgagcaggaaattagcctagggcctagcattgacctcgac
aatttaacaggcaccacagttattaatggaagggccacaagtacctctgg
cgagattaagacaatgactcacttttttccatgcatgaaaaatttcaagc
ctcaaaaggcatggaggcttttgtcaaaatacccactggtaagaaaatga
cttccttcaggtccaggctttgggctcaatgggaagggatccatccctga
tcctgttatattgctgaaagctgtttcccagagcttttctgtgattgacc
tgtgtccctctgagaagcttgtccagggtgtccttggggaattccatgcc
aaggatagaacacagtaggaatggtttcagcataatgctaggagtgctgc
ccaggtgactttcatcttctgtttcatgctcttcagagtagaaggatgga
gagcctggcaggtgttgtaattgtttgtttctttgtttgtgatttctgtc
tagttgagtgtttctctggtgttggctgaggctgagatcctgctgccaag
ccctgttctctttctggccatgaaacttctagcccctttgctggtctgtt
tctaagagcttttattctggtggcttgcttccctctaccacctatgcagg
tgtagcagctgcttcacagttgtgcccttagtatttagcatttacatctt
cctagcccacacattctttgcatgctaaccctggagcttcacagtaggac
tgggaatgacactgtgagcctagagcaatctgctttctgccccaatcaga
acagcatttttttctttgcttggcagtttactcaaaaggccaggcagaac
tgagagaactggatcaagactgggtagactgggcctgttatttatgctct
gaaactttactcaattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_95103297_95104485
seq2: B6Ng01-144B19.g_67_1234

seq1  GAATTCTGTCTCACCCAACCAAATACGAACAATGGGAATTGATGTTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCTCACCCAACCAAATACGAACAATGGGAATTGATGTTAAAT  50

seq1  AGGCAGCTCAGTCACTTGTCCTGGGCTTTCATGAATGAAAATAGCTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCTCAGTCACTTGTCCTGGGCTTTCATGAATGAAAATAGCTTCAG  100

seq1  TAAAAATTTCAAATTCCTCGGGTGAAGAGAAAGAGATTTTCTACAAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTTCAAATTCCTCGGGTGAAGAGAAAGAGATTTTCTACAAAGAG  150

seq1  GTTTATAGAGGTCTTTTGGGAAATGTAAGGACAAATCAATACTGAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATAGAGGTCTTTTGGGAAATGTAAGGACAAATCAATACTGAAAAGA  200

seq1  AAAAAATTTCCGGATAAAATGGGATCAAGACAAAGGAGACTTTGAGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTTCCGGATAAAATGGGATCAAGACAAAGGAGACTTTGAGCTGG  250

seq1  GTCAGGCTCATGAGCAGGAAATTAGCCTAGGGCCTAGCATTGACCTCGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCTCATGAGCAGGAAATTAGCCTAGGGCCTAGCATTGACCTCGAC  300

seq1  AATTTAACAGGCACCACAGTTATTAATGGAAGGGCCACAAGTACCTCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAACAGGCACCACAGTTATTAATGGAAGGGCCACAAGTACCTCTGG  350

seq1  CGAGATTAAGACAATGACTCACTTTTTTCCATGCATGAAAAATTTCAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGATTAAGACAATGACTCACTTTTTTCCATGCATGAAAAATTTCAAGC  400

seq1  CTCAAAAGGCATGGAGGCTTTTGTCAAAATACCCACTGGTAAGAAAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAGGCATGGAGGCTTTTGTCAAAATACCCACTGGTAAGAAAATGA  450

seq1  CTTCCTTCAGGTCCAGGCTTTGGGCTCAATGGGAAGGGATCCATCCCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCAGGTCCAGGCTTTGGGCTCAATGGGAAGGGATCCATCCCTGA  500

seq1  TCCTGTTATATTGCTGAAAGCTGTTTCCCAGAGCTTTTCTGTGATTGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTATATTGCTGAAAGCTGTTTCCCAGAGCTTTTCTGTGATTGACC  550

seq1  TGTGTCCCTCTGAGAAGCTTGTCCAGGGTGTCCTTGGGGAATTCCATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCCTCTGAGAAGCTTGTCCAGGGTGTCCTTGGGGAATTCCATGCC  600

seq1  AAGGATAGAACACAGTAGGAATGGTTTCAGCATAATGCTAGGAGTGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATAGAACACAGTAGGAATGGTTTCAGCATAATGCTAGGAGTGCTGC  650

seq1  CCAGGTGACTTTCATCTTCTGTTTCATGCTCTTCAGAGTAGAAGGATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGACTTTCATCTTCTGTTTCATGCTCTTCAGAGTAGAAGGATGGA  700

seq1  GAGCCTGGCAGGTGTTGTAATTGTTTGTTTCTTTGTTTGTGATTTCTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGGCAGGTGTTGTAATTGTTTGTTTCTTTGTTTGTGATTTCTGTC  750

seq1  TAGTTGAGTGTTTCTCTGGTGTTGGCTGAGGCTGAGATCCTGCTGCCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGAGTGTTTCTCTGGTGTTGGCTGAGGCTGAGATCCTGCTGCCAAG  800

seq1  CCCTGTTCTCTTTCTGGCCATGAAACTTCTAGCCCCTTTGCTGGTCTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCTCTTTCTGGCCATGAAACTTCTAGCCCCTTTGCTGGTCTGTT  850

seq1  TCTAAGAGCTTTTATTCTGGTGGCTTGCTTCCCTCTACCACCTATGCAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAGCTTTTATTCTGGTGGCTTGCTTCCCTCTACCACCTATGCAGG  900

seq1  TGTAGCAGCTGCTTCACAGTTGTGCCCTTAGTATTTAGCATTTACATCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCAGCTGCTTCACAGTTGTGCCCTTAGTATTTAGCATTTACATCTT  950

seq1  CCTAGCCCACACAATTCCTTTGCATTGCTAACCCTGAGCCTCCACAGTAG  1000
      |||||||||||||  | ||||||| |||||||||||   || ||||||||
seq2  CCTAGCCCACACA--TTCTTTGCA-TGCTAACCCTGGAGCTTCACAGTAG  997

seq1  GAACTGGGAATGAACACTTGTGAGCCTCAGAGCAAAACCTGCTTTCTGCC  1050
      | |||||||||| |||| ||||||||| |||||  || ||||||||||||
seq2  G-ACTGGGAATG-ACAC-TGTGAGCCT-AGAGC--AATCTGCTTTCTGCC  1041

seq1  CCAATCCAAGAACAGCCATTTTTTTCCTTGCTTGGCAGTTGTACTCAAAA  1100
      ||||||  ||||||| |||||||||| ||||||||||||| ||||| |||
seq2  CCAATC--AGAACAG-CATTTTTTTCTTTGCTTGGCAGTT-TACTC-AAA  1086

seq1  AGGCACAGGCCAGAAACTGA-AGACTTGAATCCAAAGGAACTGTTGAGCT  1149
      |||| |||| ||| |||||| |||  || |||  |||  ||||   ||  
seq2  AGGC-CAGG-CAG-AACTGAGAGAACTGGATC--AAG--ACTGGGTAGAC  1129

seq1  TGG--CTGATAAATTTTTATGTTGAG-ATCTTTACTCAATTGA  1189
      |||  ||| ||    |||||| |  | | ||||||||||||||
seq2  TGGGCCTGTTA----TTTATGCTCTGAAACTTTACTCAATTGA  1168