BAC Information

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BAC

Clone NameB6Ng01-148C24
Chromosome5 (Build37)
Map Location 126,758,434 - 126,759,528
singlet/doubletsinglet
Overlap genenone
Upstream geneScarb1, Ubc, Dhx37, Bri3bp, Aacs, Tmem132b, EG231736, LOC100039178, LOC665760
Downstream geneLOC100040327, Tmem132c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148C24.bB6Ng01-148C24.g
ACCDH944866DH944867
length3891,093
definitionDH944866|Mus musculus domesticus DNA, BAC clone: B6Ng01-148C24, 5' end.DH944867|Mus musculus domesticus DNA, BAC clone: B6Ng01-148C24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctaaagtatgtactatgaaatagtatcatatccacccaccccattgccc
ctctcaccaactttccctacatccctccaacaacgctttctccatacttc
ctgccatttgctttataaaaataacccatgagtctattcacatgtgcata
aaaatgaggacaaacgctgaagcatggccaacctaccaatggctcaaggg
cttacccaggtgatggtagctactgtgagttcatgactgtgtcagccatg
ttgtgttccatatggctcttcttctttttcttcttctcctcctcctcccc
ctccccctccccctcctcctcctcctcctcctcctcctcctccttctcct
cttcctcatattatactaattcgtttttttttgtgtata

gaattcaggggttaaagacctgaactaccacaatcagcccattatttttt
tagtcatagtacaaattccattttaattataaaatacacctcttattgga
cttgtgctctctatacctcccccaaacactttatctaataagcaaacaaa
tccaggtatgaatttctgggatctcactcagacaagggttactttccttt
atttttttctttccctcttctgtaatttttttctaatgctggcctgggcc
taagcatattttttctgttactttggcttccttccttcatctttccctaa
agatcctctcctagccatgtgactgcctgcctgccatgtggcctacctcc
atgctggctcatagcaaacctcgtgactttgtctccgtttcttaagttcc
cacttaaaaacctataataaacgtttctctaaaactcaataaatatacaa
ataagcaaacaaacaaataagcaagcaaactcttttggccagtccggaaa
gtgaaccctttgtcatgggtgggagtctccctctgttgtagaagcaaaga
ctttcttttgctatgtgtcccagaggagtggcctctgcagccctaggcat
gctaattcctgctaaattccaaatagcctaaattccaaaatagttttttt
tttttcttctgcttcatcagcttctcctcagagacatttgggaaataaat
ccaggaaggaaaagggtggaagggtcaatcttttttcctgagtcttcata
gctctatcctatgggagggttctccggggctgtgagttgcagcccagtga
tattcttctttagggcaaacggggattggatgcaagctggtctcactaga
tgacagaaatagtggacttgtgatactttcggtgaggcctttgtcagccc
tctccctctttgtgctggaatgtcgtcttgctgggtcctgggtggacaac
cacagttgctggtgacttcatgagaccacagccctgtccgcccagaaggc
agacaacttctgctttgcaatctttctcttctaccctcttctttggtgtt
cctgacttgtgggaagtaggggttggtggcagagtgttcccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_126758434_126759528
seq2: B6Ng01-148C24.g_66_1158

seq1  GAATTCAGGGGTTAAAGACCTGAACTACCACAATCAGCCCATTATTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGGTTAAAGACCTGAACTACCACAATCAGCCCATTATTTTTT  50

seq1  TAGTCATAGTACAAATTCCATTTTAATTATAAAATACACCTCTTATTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATAGTACAAATTCCATTTTAATTATAAAATACACCTCTTATTGGA  100

seq1  CTTGTGCTCTCTATACCTCCCCCAAACACTTTATCTAATAAGCAAACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGCTCTCTATACCTCCCCCAAACACTTTATCTAATAAGCAAACAAA  150

seq1  TCCAGGTATGAATTTCTGGGATCTCACTCAGACAAGGGTTACTTTCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTATGAATTTCTGGGATCTCACTCAGACAAGGGTTACTTTCCTTT  200

seq1  ATTTTTTTCTTTCCCTCTTCTGTAATTTTTTTCTAATGCTGGCCTGGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCTTTCCCTCTTCTGTAATTTTTTTCTAATGCTGGCCTGGGCC  250

seq1  TAAGCATATTTTTTCTGTTACTTTGGCTTCCTTCCTTCATCTTTCCCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATATTTTTTCTGTTACTTTGGCTTCCTTCCTTCATCTTTCCCTAA  300

seq1  AGATCCTCTCCTAGCCATGTGACTGCCTGCCTGCCATGTGGCCTACCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTCTCCTAGCCATGTGACTGCCTGCCTGCCATGTGGCCTACCTCC  350

seq1  ATGCTGGCTCATAGCAAACCTCGTGACTTTGTCTCCGTTTCTTAAGTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGCTCATAGCAAACCTCGTGACTTTGTCTCCGTTTCTTAAGTTCC  400

seq1  CACTTAAAAACCTATAATAAACGTTTCTCTAAAACTCAATAAATATACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAAAAACCTATAATAAACGTTTCTCTAAAACTCAATAAATATACAA  450

seq1  ATAAGCAAACAAACAAATAAGCAAGCAAACTCTTTTGGCCAGTCCGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAAACAAACAAATAAGCAAGCAAACTCTTTTGGCCAGTCCGGAAA  500

seq1  GTGAACCCTTTGTCATGGGTGGGAGTCTCCCTCTGTTGTAGAAGCAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACCCTTTGTCATGGGTGGGAGTCTCCCTCTGTTGTAGAAGCAAAGA  550

seq1  CTTTCTTTTGCTATGTGTCCCAGAGGAGTGGCCTCTGCAGCCCTAGGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTTGCTATGTGTCCCAGAGGAGTGGCCTCTGCAGCCCTAGGCAT  600

seq1  GCTAATTCCTGCTAAATTCCAAATAGCCTAAATTCCAAAATAGTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTCCTGCTAAATTCCAAATAGCCTAAATTCCAAAATAGTTTTTTT  650

seq1  TTTTTCTTCTGCTTCATCAGCTTCTCCTCAGAGACATTTGGGAAATAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTCTGCTTCATCAGCTTCTCCTCAGAGACATTTGGGAAATAAAT  700

seq1  CCAGGAAGGAAAAGGGTGGAAGGGTCAATCTTTTTTCCTGAGTCTTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAGGAAAAGGGTGGAAGGGTCAATCTTTTTTCCTGAGTCTTCATA  750

seq1  GCTCTATCCTATGGGAGGGTTCTCCGGGGCTGTGAGTTGCAGCCCAGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTATCCTATGGGAGGGTTCTCCGGGGCTGTGAGTTGCAGCCCAGTGA  800

seq1  TATTCTTCTTTAGGGCAAACGGGGATTGGATGCAAGCTGGTCTCACTAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTCTTTAGGGCAAACGGGGATTGGATGCAAGCTGGTCTCACTAGA  850

seq1  TGACAGAAATAGTGGACTTGTGATACTTTCGGTGAGGCCTTTGTCAGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAAATAGTGGACTTGTGATACTTTCGGTGAGGCCTTTGTCAGCCC  900

seq1  TCT-CCTCTTTGTGCTGGAATGTCGTCTTGCTGGGTCCTGGGTGGACAAC  949
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTTTGTGCTGGAATGTCGTCTTGCTGGGTCCTGGGTGGACAAC  950

seq1  CACAGTTGCT-GTGACTTCATGAGACCAACAGCCCTGTCCCGCCCAGAAG  998
      |||||||||| |||||||||||||||| |||||||||| |||||||||||
seq2  CACAGTTGCTGGTGACTTCATGAGACC-ACAGCCCTGT-CCGCCCAGAAG  998

seq1  GCAAGACAACCTCTGGCTTTTGCAATCTTTCTCTTCTACCCTCTTCTTTG  1048
      || ||||||| ||||   ||||||||||||||||||||||||||||||||
seq2  GC-AGACAACTTCTG--CTTTGCAATCTTTCTCTTCTACCCTCTTCTTTG  1045

seq1  GTGTTTCCTGACTTGTGTGAGGTAGGGGTT-GTGGCAGA-TGTTCCCCA  1095
      ||| ||||||||||||| || ||||||||| |||||||| |||||||||
seq2  GTG-TTCCTGACTTGTGGGAAGTAGGGGTTGGTGGCAGAGTGTTCCCCA  1093


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