BAC Information

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BAC

Clone NameB6Ng01-153G16
Chromosome5 (Build37)
Map Location 10,435,429 - 10,600,365
singlet/doubletdoublet
Overlap geneLOC100041395, EG625586, LOC242809
Upstream gene9330182L06Rik, Grm3, LOC100042768, LOC625446, LOC435832, LOC381612
Downstream geneLOC623849, LOC100041408, LOC667880, EG667888, EG667901, EG667907, LOC667916, LOC100041472, EG545728, LOC100042819, LOC667942, LOC667948, EG667949, Speer1-ps1, EG667956, LOC667961, EG667967, LOC100042858, LOC667974, EG667986, EG623898
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153G16.bB6Ng01-153G16.g
ACCDH948736DH948737
length862824
definitionDH948736|Mus musculus domesticus DNA, BAC clone: B6Ng01-153G16, 5' end.DH948737|Mus musculus domesticus DNA, BAC clone: B6Ng01-153G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,599,502 - 10,600,365)(10,435,429 - 10,436,244)
sequence
gaattcctcactcttcctctgagcacatgtgctagagtaggtggactaat
gtacgcaatggtttagtacctcagtcttgatttggccaaaggatctagac
atgatacactatttcacatatatttttaccttaaaaggtgtccaaaatat
caagaagtactctaaggtaccagctgacacttgccctcattgattctttt
gtcttcctttttaaaagcagcacctagtttctccaaatggtgacagtaga
ttgccactccctacagtgactctgcttcttcctctctgaactttgtcaca
aagaatccagtgcaaccaggggtaatgttagcttaaagtttggtggattt
ttttattgtgctcttaaactgaagtatttatacttcaggatacagtaaac
ttcagtactgaggtgaaattatacaatcatgtcaatacaaatatttactc
cagagcttatatgtgaagcaaaaattacctgatcaaaaatgccaatagtc
ctgaggttcacaatgggtacactgcacctgggacaagtaaaaatataaaa
ccactgtgctgtattacaacatcaggctagaaggttctggcatctgtgaa
atgtactatgattttttagatacagtggcattgtctttacttctggcaca
acacagtttctctgaacaaaagtgatatatgtaatttattgccttgctaa
gtcaacactttataagaacttataataataaatcttccatattattgtta
gatggcaagtctattctggcactgaaatatgtgtcacatttatgacaatc
aataataattagtaactctccagggtatagtatttaaaggagaagaagaa
gcgagaggaaga
gaattcatacacagatactcatggttgatgattttatatgcttccttgct
cagaacagttattttcttactgcactgaaattattctctaaactacaagc
tactttataaactaaataagccatatatatatatatatatatatatatat
atatatatatcaagagtgtgtcattttaaggaatattttatattttggaa
atttttggaagcagagatgtaaggtcaatcaaacaaatacacacattgat
atgcaagacttgtaaattcaaaagtctaagtgaaatatcaaaatcacaag
taggtttataaagagaagttatggaataagtaatacaaataccacttatg
aaatgcaaattttcagaagatgataaacgtttatacaaaagcatcagtaa
actgaatcagaaataggaacaagagccatgttttgttagggacattctag
ttaagcctacctgtgatcctttgggggaattgaaagaagaaagtaatgaa
taaataaataaaatttaaatactgaattaagctaaccaggtcaggagaaa
ataaactaaaacttcctcaaacatgtagcaaaatgatgtctgtagaagac
agtaaatggctagcatcaatcaatcttgtatgggatatcccatgttctaa
aagttatagagtcctttttacatcaacatcaacagatcaatttaagtttc
atgctaattttttgaccatccattttattttgtctttactttgtcaacct
tctgaagattattttctccgtgattagcaatactattgaatactaagtag
gggtgaattcacatcggtttgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_10599502_10600365
seq2: B6Ng01-153G16.b_41_903 (reverse)

seq1  TCTTCCTCTTCTTCTTCTTCTTCTCCTTTAAATACTATACCCTGGAGAGT  50
      |||||||||    |||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCT--CGCTTCTTCTTCTCCTTTAAATACTATACCCTGGAGAGT  48

seq1  TACTAATTATTATTGATTGTCATAAATGTGACACATATTTCAGTGCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATTATTATTGATTGTCATAAATGTGACACATATTTCAGTGCCAGA  98

seq1  ATAGACTTGCCATCTAACAATAATATGGAAGATTTATTATTATAAGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTTGCCATCTAACAATAATATGGAAGATTTATTATTATAAGTTCT  148

seq1  TATAAAGTGTTGACTTAGCAAGGCAATAAATTACATATATCACTTTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTGTTGACTTAGCAAGGCAATAAATTACATATATCACTTTTGTT  198

seq1  CAGAGAAACTGTGTTGTGCCAGAAGTAAAGACAATGCCACTGTATCT-AA  249
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGAGAAACTGTGTTGTGCCAGAAGTAAAGACAATGCCACTGTATCTAAA  248

seq1  AAATCATAGTACATTTCACAGATGCCAGAACCTTCTAGCCTGATGTTGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATAGTACATTTCACAGATGCCAGAACCTTCTAGCCTGATGTTGTA  298

seq1  ATACAGCACAGTGGTTTTATATTTTTACTTGTCCCAGGTGCAGTGTACCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCACAGTGGTTTTATATTTTTACTTGTCCCAGGTGCAGTGTACCC  348

seq1  ATTGTGAACCTCAGGACTATTGGCATTTTTGATCAGGTAATTTTTGCTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAACCTCAGGACTATTGGCATTTTTGATCAGGTAATTTTTGCTTC  398

seq1  ACATATAAGCTCTGGAGTAAATATTTGTATTGACATGATTGTATAATTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAAGCTCTGGAGTAAATATTTGTATTGACATGATTGTATAATTTC  448

seq1  ACCTCAGTACTGAAGTTTACTGTATCCTGAAGTATAAATACTTCAGTTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGTACTGAAGTTTACTGTATCCTGAAGTATAAATACTTCAGTTTA  498

seq1  AGAGCACAATAAAAAAATCCACCAAACTTTAAGCTAACATTACCCCTGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACAATAAAAAAATCCACCAAACTTTAAGCTAACATTACCCCTGGT  548

seq1  TGCACTGGATTCTTTGTGACAAAGTTCAGAGAGGAAGAAGCAGAGTCACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGGATTCTTTGTGACAAAGTTCAGAGAGGAAGAAGCAGAGTCACT  598

seq1  GTAGGGAGTGGCAATCTACTGTCACCATTTGGAGAAACTAGGTGCTGCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGAGTGGCAATCTACTGTCACCATTTGGAGAAACTAGGTGCTGCTT  648

seq1  TTAAAAAGGAAGACAAAAGAATCAATGAGGGCAAGTGTCAGCTGGTACCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGGAAGACAAAAGAATCAATGAGGGCAAGTGTCAGCTGGTACCT  698

seq1  TAGAGTACTTCTTGATATTTTGGACACCTTTTAAGGTAAAAATATATGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTACTTCTTGATATTTTGGACACCTTTTAAGGTAAAAATATATGTG  748

seq1  AAATAGTGTATCATGTCTAGATCCTTTGGCCAAATCAAGACTGAGGTACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTGTATCATGTCTAGATCCTTTGGCCAAATCAAGACTGAGGTACT  798

seq1  AAACCATTGCGTACATTAGTCCACCTACTCTAGCACATGTGCTCAGAGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATTGCGTACATTAGTCCACCTACTCTAGCACATGTGCTCAGAGGA  848

seq1  AGAGTGAGGAATTCC  864
      |||||||||||||||
seq2  AGAGTGAGGAATTCC  863

seq1: chr5_10435429_10436244
seq2: B6Ng01-153G16.g_70_893

seq1  GAATTCATACACAGATACTCATGGTTGATGATTTTATATGCTTCCTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACACAGATACTCATGGTTGATGATTTTATATGCTTCCTTGCT  50

seq1  CAGAACAGTTATTTTCTTACTGCACTGAAATTATTCTCTAAACTACAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAGTTATTTTCTTACTGCACTGAAATTATTCTCTAAACTACAAGC  100

seq1  TACTTTATAAACTAAATAAGCCATATATATATATATATATATATATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTATAAACTAAATAAGCCATATATATATATATATATATATATATAT  150

seq1  ATATATATATCAAGAGTGTGTCATTTTAAGGAATATTTTATATTTTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATCAAGAGTGTGTCATTTTAAGGAATATTTTATATTTTGGAA  200

seq1  ATTTTTGGAAGCAGAGATGTAAGGTCAATCAAACAAATACACACATTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGAAGCAGAGATGTAAGGTCAATCAAACAAATACACACATTGAT  250

seq1  ATGCAAGACTTGTAAATTCAAAAGTCTAAGTGAAATATCAAAATCACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGACTTGTAAATTCAAAAGTCTAAGTGAAATATCAAAATCACAAG  300

seq1  TAGGTTTATAAAGAGAAGTTATGGAATAAGTAATACAAATACCACTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTATAAAGAGAAGTTATGGAATAAGTAATACAAATACCACTTATG  350

seq1  AAATGCAAATTTTCAGAAGATGATAAACGTTTATACAAAAGCATCAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAAATTTTCAGAAGATGATAAACGTTTATACAAAAGCATCAGTAA  400

seq1  ACTGAATCAGAAATAGGAACAAGAGCCATGTTTTGTTAGGGACATTCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATCAGAAATAGGAACAAGAGCCATGTTTTGTTAGGGACATTCTAG  450

seq1  TTAAGCCTACCTGTGATCCTTTGGGGGAATTGAAAGAAGAAAGTAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCTACCTGTGATCCTTTGGGGGAATTGAAAGAAGAAAGTAATGAA  500

seq1  TAAATAAATAAAATTTAAATACTGAATTAAGCTAACCAGGTCAGGAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATAAAATTTAAATACTGAATTAAGCTAACCAGGTCAGGAGAAA  550

seq1  ATAAACTAAAACTTCCTCAAACATGTAGCAAAATGATGTCTGTAGAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTAAAACTTCCTCAAACATGTAGCAAAATGATGTCTGTAGAAGAC  600

seq1  AGTAAATGGCTAGCATCAATCAATCTTGTATGGGATATCCCATGTTCT-A  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGTAAATGGCTAGCATCAATCAATCTTGTATGGGATATCCCATGTTCTAA  650

seq1  AAGTTATAGAGTCC-TTTTACATCAACATCAACAGATCAATTTAAG-TTC  697
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  AAGTTATAGAGTCCTTTTTACATCAACATCAACAGATCAATTTAAGTTTC  700

seq1  ATGCTAA-TTTTTGACCATCCATTTTA-TTTGTCTTTACTTTGTCAACC-  744
      ||||||| ||||||||||||||||||| ||||||||||||||||||||| 
seq2  ATGCTAATTTTTTGACCATCCATTTTATTTTGTCTTTACTTTGTCAACCT  750

seq1  TCTGAAAGATTA-TTTCTCTGTGATTAGCAATACTA-TGAATACTAAGTA  792
      |||| ||||||| |||||| |||||||||||||||| |||||||||||||
seq2  TCTG-AAGATTATTTTCTCCGTGATTAGCAATACTATTGAATACTAAGTA  799

seq1  -GGGTGAATTCACAATCGTTTGTTA  816
       |||||||||||||   ||||||||
seq2  GGGGTGAATTCACATCGGTTTGTTA  824